Miyakogusa Predicted Gene
- Lj0g3v0258939.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0258939.1 Non Chatacterized Hit- tr|K3Z576|K3Z576_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si021694,33.72,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.17174.1
(414 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma20g35770.1 461 e-130
Glyma20g35770.3 460 e-129
Glyma20g35770.2 460 e-129
Glyma10g31880.1 427 e-119
Glyma20g35770.4 373 e-103
Glyma20g35770.5 358 9e-99
Glyma09g16740.1 114 2e-25
Glyma03g23310.1 76 6e-14
Glyma01g29490.1 53 5e-07
>Glyma20g35770.1
Length = 752
Score = 461 bits (1185), Expect = e-130, Method: Compositional matrix adjust.
Identities = 275/436 (63%), Positives = 310/436 (71%), Gaps = 38/436 (8%)
Query: 1 MENGHDGKLAEKFSGLAINQQHGQQGVHDQSNLSSNHNESLYQVMKAVESAEVTIKQQ-- 58
MENGHDGKLA+KFSGL INQ H QQ VHDQSNLSSN+N++LYQVMKAVE+AE TIKQQ
Sbjct: 1 MENGHDGKLADKFSGLNINQ-HAQQHVHDQSNLSSNNNDNLYQVMKAVEAAEATIKQQVE 59
Query: 59 ----RRNEQVD--QNSHPWKEQVYGS--------------------YEAR--QSIPSSAI 90
R+E + Q + V+ YE R + +P +
Sbjct: 60 ENSRLRSELLSKIQELEKYVSSVFCDGICLIYHILLLDNLGLLIFRYEDRTIRMVPGLYM 119
Query: 91 SNTS-NYSGSSEINGTLRVQPNERLPVENTGNSQLSSPFTRSISPNRHLLGGDLDPQFNP 149
S+ S NY S I LP++NTG SQLSSP TRS+SP+R L GDLD +FN
Sbjct: 120 SSQSLNYP--SPIPSHSEEPLGNGLPMDNTGYSQLSSPSTRSVSPSRLLPEGDLDSRFNS 177
Query: 150 PRQGLTPMAETN-NSNTSLQQDLAI-KVXXXXXXXXXXXKHLADYAAKEAQIRNEKYVLD 207
PRQGL P+ ETN N+N+ L+QDLAI KV K LADY+ KE QIRNEKYVL+
Sbjct: 178 PRQGLMPVVETNSNNNSLLKQDLAINKVREHEEEIILLRKRLADYSVKEGQIRNEKYVLE 237
Query: 208 KRIAYMRVAFDQQQQDLVDAASKALSYRQDVIEENIRLTYALQDAQQERSTFVSSLVPLL 267
KRIAYMR+AFDQQQQDLVDAASKALSYRQD+IEENIRLTYALQDAQQERSTFVSSL+PLL
Sbjct: 238 KRIAYMRLAFDQQQQDLVDAASKALSYRQDIIEENIRLTYALQDAQQERSTFVSSLLPLL 297
Query: 268 AEYSLQPNVLDAQSIVSNVKVLFKHXXXXXXXXXXXXXXXXYQLTPWRSDMNQNHATAAT 327
AEYSLQP V DAQSIVSNVKVLFKH YQLTPWRSDM NHA AT
Sbjct: 298 AEYSLQPPVPDAQSIVSNVKVLFKHLQEKLLLTESKLKESQYQLTPWRSDM--NHANVAT 355
Query: 328 QSPSHSIGAPLATSNKNGLELVPRHIYSQVKTQVSVDTQAGTDWGMLGRHQSGLGGGVAS 387
QS HSIGAPL TSNKNGLELVP+H+YSQVK QVSVD QAGT+ +LGRHQ+GL GGVA+
Sbjct: 356 QSQPHSIGAPLTTSNKNGLELVPQHMYSQVKPQVSVDAQAGTEPDLLGRHQNGLSGGVAT 415
Query: 388 NVDADDLERYSPLASR 403
+VDADDL R+SPLASR
Sbjct: 416 SVDADDLGRFSPLASR 431
>Glyma20g35770.3
Length = 729
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 275/436 (63%), Positives = 310/436 (71%), Gaps = 38/436 (8%)
Query: 1 MENGHDGKLAEKFSGLAINQQHGQQGVHDQSNLSSNHNESLYQVMKAVESAEVTIKQQ-- 58
MENGHDGKLA+KFSGL INQ H QQ VHDQSNLSSN+N++LYQVMKAVE+AE TIKQQ
Sbjct: 1 MENGHDGKLADKFSGLNINQ-HAQQHVHDQSNLSSNNNDNLYQVMKAVEAAEATIKQQVE 59
Query: 59 ----RRNEQVD--QNSHPWKEQVYGS--------------------YEAR--QSIPSSAI 90
R+E + Q + V+ YE R + +P +
Sbjct: 60 ENSRLRSELLSKIQELEKYVSSVFCDGICLIYHILLLDNLGLLIFRYEDRTIRMVPGLYM 119
Query: 91 SNTS-NYSGSSEINGTLRVQPNERLPVENTGNSQLSSPFTRSISPNRHLLGGDLDPQFNP 149
S+ S NY S I LP++NTG SQLSSP TRS+SP+R L GDLD +FN
Sbjct: 120 SSQSLNYP--SPIPSHSEEPLGNGLPMDNTGYSQLSSPSTRSVSPSRLLPEGDLDSRFNS 177
Query: 150 PRQGLTPMAETN-NSNTSLQQDLAI-KVXXXXXXXXXXXKHLADYAAKEAQIRNEKYVLD 207
PRQGL P+ ETN N+N+ L+QDLAI KV K LADY+ KE QIRNEKYVL+
Sbjct: 178 PRQGLMPVVETNSNNNSLLKQDLAINKVREHEEEIILLRKRLADYSVKEGQIRNEKYVLE 237
Query: 208 KRIAYMRVAFDQQQQDLVDAASKALSYRQDVIEENIRLTYALQDAQQERSTFVSSLVPLL 267
KRIAYMR+AFDQQQQDLVDAASKALSYRQD+IEENIRLTYALQDAQQERSTFVSSL+PLL
Sbjct: 238 KRIAYMRLAFDQQQQDLVDAASKALSYRQDIIEENIRLTYALQDAQQERSTFVSSLLPLL 297
Query: 268 AEYSLQPNVLDAQSIVSNVKVLFKHXXXXXXXXXXXXXXXXYQLTPWRSDMNQNHATAAT 327
AEYSLQP V DAQSIVSNVKVLFKH YQLTPWRSDM NHA AT
Sbjct: 298 AEYSLQPPVPDAQSIVSNVKVLFKHLQEKLLLTESKLKESQYQLTPWRSDM--NHANVAT 355
Query: 328 QSPSHSIGAPLATSNKNGLELVPRHIYSQVKTQVSVDTQAGTDWGMLGRHQSGLGGGVAS 387
QS HSIGAPL TSNKNGLELVP+H+YSQVK QVSVD QAGT+ +LGRHQ+GL GGVA+
Sbjct: 356 QSQPHSIGAPLTTSNKNGLELVPQHMYSQVKPQVSVDAQAGTEPDLLGRHQNGLSGGVAT 415
Query: 388 NVDADDLERYSPLASR 403
+VDADDL R+SPLASR
Sbjct: 416 SVDADDLGRFSPLASR 431
>Glyma20g35770.2
Length = 750
Score = 460 bits (1183), Expect = e-129, Method: Compositional matrix adjust.
Identities = 275/436 (63%), Positives = 310/436 (71%), Gaps = 38/436 (8%)
Query: 1 MENGHDGKLAEKFSGLAINQQHGQQGVHDQSNLSSNHNESLYQVMKAVESAEVTIKQQ-- 58
MENGHDGKLA+KFSGL INQ H QQ VHDQSNLSSN+N++LYQVMKAVE+AE TIKQQ
Sbjct: 1 MENGHDGKLADKFSGLNINQ-HAQQHVHDQSNLSSNNNDNLYQVMKAVEAAEATIKQQVE 59
Query: 59 ----RRNEQVD--QNSHPWKEQVYGS--------------------YEAR--QSIPSSAI 90
R+E + Q + V+ YE R + +P +
Sbjct: 60 ENSRLRSELLSKIQELEKYVSSVFCDGICLIYHILLLDNLGLLIFRYEDRTIRMVPGLYM 119
Query: 91 SNTS-NYSGSSEINGTLRVQPNERLPVENTGNSQLSSPFTRSISPNRHLLGGDLDPQFNP 149
S+ S NY S I LP++NTG SQLSSP TRS+SP+R L GDLD +FN
Sbjct: 120 SSQSLNYP--SPIPSHSEEPLGNGLPMDNTGYSQLSSPSTRSVSPSRLLPEGDLDSRFNS 177
Query: 150 PRQGLTPMAETN-NSNTSLQQDLAI-KVXXXXXXXXXXXKHLADYAAKEAQIRNEKYVLD 207
PRQGL P+ ETN N+N+ L+QDLAI KV K LADY+ KE QIRNEKYVL+
Sbjct: 178 PRQGLMPVVETNSNNNSLLKQDLAINKVREHEEEIILLRKRLADYSVKEGQIRNEKYVLE 237
Query: 208 KRIAYMRVAFDQQQQDLVDAASKALSYRQDVIEENIRLTYALQDAQQERSTFVSSLVPLL 267
KRIAYMR+AFDQQQQDLVDAASKALSYRQD+IEENIRLTYALQDAQQERSTFVSSL+PLL
Sbjct: 238 KRIAYMRLAFDQQQQDLVDAASKALSYRQDIIEENIRLTYALQDAQQERSTFVSSLLPLL 297
Query: 268 AEYSLQPNVLDAQSIVSNVKVLFKHXXXXXXXXXXXXXXXXYQLTPWRSDMNQNHATAAT 327
AEYSLQP V DAQSIVSNVKVLFKH YQLTPWRSDM NHA AT
Sbjct: 298 AEYSLQPPVPDAQSIVSNVKVLFKHLQEKLLLTESKLKESQYQLTPWRSDM--NHANVAT 355
Query: 328 QSPSHSIGAPLATSNKNGLELVPRHIYSQVKTQVSVDTQAGTDWGMLGRHQSGLGGGVAS 387
QS HSIGAPL TSNKNGLELVP+H+YSQVK QVSVD QAGT+ +LGRHQ+GL GGVA+
Sbjct: 356 QSQPHSIGAPLTTSNKNGLELVPQHMYSQVKPQVSVDAQAGTEPDLLGRHQNGLSGGVAT 415
Query: 388 NVDADDLERYSPLASR 403
+VDADDL R+SPLASR
Sbjct: 416 SVDADDLGRFSPLASR 431
>Glyma10g31880.1
Length = 802
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/318 (71%), Positives = 251/318 (78%), Gaps = 14/318 (4%)
Query: 88 SAISNTSNYSGSSEINGTLRVQPNERLPVENTGNSQLSSPFTRSISPNRHLLGGDLDPQF 147
+A SNT +S +S+INGTLRVQPN++LP++NTG SQLSSP TRSISP+RHLL G LD +F
Sbjct: 173 AARSNTGGHSENSQINGTLRVQPNDQLPMDNTGYSQLSSPSTRSISPSRHLLEGVLDSRF 232
Query: 148 NPPRQGLTPMAETNNSNTSL-QQDLAI-KVXXXXXXXXXXXKHLADYAAKEAQIRNEKYV 205
N PRQGL P AETNN+N SL +QDLAI KV KHL+DY+ KEAQIRNEKYV
Sbjct: 233 NSPRQGLMPGAETNNNNNSLLKQDLAINKVREHEEEIILLRKHLSDYSVKEAQIRNEKYV 292
Query: 206 LDKRIAYMRVAFDQQQQDLVDAASKALSYRQDVIEENIRLTYALQDAQQERSTFVSSLVP 265
L+KRIAYMR+AFDQQQQDLVDAASKALSYRQD+IEENIRLTYALQDAQQERSTFVSSL+P
Sbjct: 293 LEKRIAYMRLAFDQQQQDLVDAASKALSYRQDIIEENIRLTYALQDAQQERSTFVSSLLP 352
Query: 266 LLAEYSLQPNVLDAQSIVSNVKVLFKHXXXXXXXXXXXXXXXXYQLTPWRSDMNQNHATA 325
LLAEYSLQP V DAQSIVSNVKVLFKH YQLTPWRSD NHA
Sbjct: 353 LLAEYSLQPPVPDAQSIVSNVKVLFKHLQEKLLLTESKLKESQYQLTPWRSDT--NHANV 410
Query: 326 ATQSPSHSIGAPLATSNKNGLELVPRHIYSQVKTQVSVDTQAGTDWGMLGRHQSGLGGGV 385
ATQS HSIGAPLATS H+YSQVK QVSVD QAGTDWG+LGR+Q+GL GGV
Sbjct: 411 ATQSQPHSIGAPLATS----------HMYSQVKPQVSVDAQAGTDWGLLGRNQNGLSGGV 460
Query: 386 ASNVDADDLERYSPLASR 403
A++VD DDL R+SPLASR
Sbjct: 461 ATSVDTDDLGRFSPLASR 478
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 57/68 (83%), Gaps = 6/68 (8%)
Query: 1 MENGHDGKLAEKFSGLAINQQHGQQGVHDQSNLSSNHNESLYQVMKAVESAEVTIKQQRR 60
MENGHDGKL EKFSGL INQ HGQQ HDQSNLSSN+N++LYQVMKAVE+AE TIKQ
Sbjct: 1 MENGHDGKLTEKFSGLNINQ-HGQQHEHDQSNLSSNNNDNLYQVMKAVEAAEATIKQ--- 56
Query: 61 NEQVDQNS 68
QV++NS
Sbjct: 57 --QVEENS 62
>Glyma20g35770.4
Length = 617
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/273 (71%), Positives = 214/273 (78%), Gaps = 4/273 (1%)
Query: 116 VENTGNSQLSSPFTRSISPNRHLLGGDLDPQFNPPRQGLTPMAETN-NSNTSLQQDLAI- 173
++NTG SQLSSP TRS+SP+R L GDLD +FN PRQGL P+ ETN N+N+ L+QDLAI
Sbjct: 1 MDNTGYSQLSSPSTRSVSPSRLLPEGDLDSRFNSPRQGLMPVVETNSNNNSLLKQDLAIN 60
Query: 174 KVXXXXXXXXXXXKHLADYAAKEAQIRNEKYVLDKRIAYMRVAFDQQQQDLVDAASKALS 233
KV K LADY+ KE QIRNEKYVL+KRIAYMR+AFDQQQQDLVDAASKALS
Sbjct: 61 KVREHEEEIILLRKRLADYSVKEGQIRNEKYVLEKRIAYMRLAFDQQQQDLVDAASKALS 120
Query: 234 YRQDVIEENIRLTYALQDAQQERSTFVSSLVPLLAEYSLQPNVLDAQSIVSNVKVLFKHX 293
YRQD+IEENIRLTYALQDAQQERSTFVSSL+PLLAEYSLQP V DAQSIVSNVKVLFKH
Sbjct: 121 YRQDIIEENIRLTYALQDAQQERSTFVSSLLPLLAEYSLQPPVPDAQSIVSNVKVLFKHL 180
Query: 294 XXXXXXXXXXXXXXXYQLTPWRSDMNQNHATAATQSPSHSIGAPLATSNKNGLELVPRHI 353
YQLTPWRSDM NHA ATQS HSIGAPL TSNKNGLELVP+H+
Sbjct: 181 QEKLLLTESKLKESQYQLTPWRSDM--NHANVATQSQPHSIGAPLTTSNKNGLELVPQHM 238
Query: 354 YSQVKTQVSVDTQAGTDWGMLGRHQSGLGGGVA 386
YSQVK QVSVD QAGT+ +LGRHQ+GL G
Sbjct: 239 YSQVKPQVSVDAQAGTEPDLLGRHQNGLSGAFC 271
>Glyma20g35770.5
Length = 611
Score = 358 bits (918), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 191/273 (69%), Positives = 208/273 (76%), Gaps = 10/273 (3%)
Query: 116 VENTGNSQLSSPFTRSISPNRHLLGGDLDPQFNPPRQGLTPMAETN-NSNTSLQQDLAI- 173
++NTG SQLSSP TR L GDLD +FN PRQGL P+ ETN N+N+ L+QDLAI
Sbjct: 1 MDNTGYSQLSSPSTRL------LPEGDLDSRFNSPRQGLMPVVETNSNNNSLLKQDLAIN 54
Query: 174 KVXXXXXXXXXXXKHLADYAAKEAQIRNEKYVLDKRIAYMRVAFDQQQQDLVDAASKALS 233
KV K LADY+ KE QIRNEKYVL+KRIAYMR+AFDQQQQDLVDAASKALS
Sbjct: 55 KVREHEEEIILLRKRLADYSVKEGQIRNEKYVLEKRIAYMRLAFDQQQQDLVDAASKALS 114
Query: 234 YRQDVIEENIRLTYALQDAQQERSTFVSSLVPLLAEYSLQPNVLDAQSIVSNVKVLFKHX 293
YRQD+IEENIRLTYALQDAQQERSTFVSSL+PLLAEYSLQP V DAQSIVSNVKVLFKH
Sbjct: 115 YRQDIIEENIRLTYALQDAQQERSTFVSSLLPLLAEYSLQPPVPDAQSIVSNVKVLFKHL 174
Query: 294 XXXXXXXXXXXXXXXYQLTPWRSDMNQNHATAATQSPSHSIGAPLATSNKNGLELVPRHI 353
YQLTPWRSDM NHA ATQS HSIGAPL TSNKNGLELVP+H+
Sbjct: 175 QEKLLLTESKLKESQYQLTPWRSDM--NHANVATQSQPHSIGAPLTTSNKNGLELVPQHM 232
Query: 354 YSQVKTQVSVDTQAGTDWGMLGRHQSGLGGGVA 386
YSQVK QVSVD QAGT+ +LGRHQ+GL G
Sbjct: 233 YSQVKPQVSVDAQAGTEPDLLGRHQNGLSGAFC 265
>Glyma09g16740.1
Length = 88
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 66/92 (71%), Gaps = 12/92 (13%)
Query: 309 YQLTPWRSDMNQNHATAATQSPSHSIGAPLATSNKNGLELVPRHIYSQVKTQVSVDTQAG 368
YQLTPWRSD N HA ATQS HSIGAPL TS H+YSQVK QV VD QA
Sbjct: 8 YQLTPWRSDTN--HANVATQSQPHSIGAPLETS----------HMYSQVKPQVFVDAQAD 55
Query: 369 TDWGMLGRHQSGLGGGVASNVDADDLERYSPL 400
TDWG+ GR+Q+GL GGVA++VD DDL R+SPL
Sbjct: 56 TDWGLFGRNQNGLSGGVATSVDTDDLGRFSPL 87
>Glyma03g23310.1
Length = 166
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 63/96 (65%)
Query: 193 AAKEAQIRNEKYVLDKRIAYMRVAFDQQQQDLVDAASKALSYRQDVIEENIRLTYALQDA 252
KE Q+ NEK L+++ + +R+A D++Q + + +AS L R+ +EEN++L + L+
Sbjct: 50 CMKELQLLNEKCKLERQFSELRMAVDEKQNEAISSASNDLVQRKGYLEENLKLAHDLKAV 109
Query: 253 QQERSTFVSSLVPLLAEYSLQPNVLDAQSIVSNVKV 288
ER F+SS++ LLAEY L P V++A SI S VKV
Sbjct: 110 DDERYIFMSSMLGLLAEYGLWPRVMNASSISSCVKV 145
>Glyma01g29490.1
Length = 268
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 353 IYSQVKTQVSVDTQAGTDWGMLGRHQSGLGGG 384
+YSQ+K QVSVD QAGT WG+LGR+Q+GL GG
Sbjct: 1 MYSQLKPQVSVDAQAGTAWGLLGRNQNGLSGG 32