Miyakogusa Predicted Gene

Lj0g3v0258629.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0258629.1 Non Chatacterized Hit- tr|G8A2X7|G8A2X7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,42,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; EUKARYOTIC
TRANSLATION INITIATION FACTOR 3 SUBUNIT (EIF-3),NULL,CUFF.17021.1
         (433 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g30000.1                                                       603   e-173
Glyma04g24430.1                                                       596   e-170
Glyma07g06160.1                                                       301   7e-82
Glyma16g02770.1                                                       296   3e-80
Glyma08g22850.1                                                       290   3e-78
Glyma07g03250.1                                                       289   3e-78

>Glyma06g30000.1 
          Length = 1762

 Score =  603 bits (1556), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 305/432 (70%), Positives = 323/432 (74%), Gaps = 2/432 (0%)

Query: 1   MKAFTEHNKFGNLPYGFRANTWXXXXXXXXXXXXXXXLPMEDEIWXXXXXXXXXXXKHEK 60
           MKAFTEHNKFGNLPYGFRANTW               LPMEDE W           KHE 
Sbjct: 243 MKAFTEHNKFGNLPYGFRANTWVVPPVVSDNPSVFLPLPMEDETWGGNGGGQGRDGKHEN 302

Query: 61  RQWGRDFAILAAMPCQTAEERQLRDRKAFLLHSLFVDVSVSKAVSAIKHFIDNTQRSFSS 120
           RQW RDFAILAAMPCQTAEERQ+RDRKAFLLHSLFVDVSV KAVSAIKH +D  Q SFS+
Sbjct: 303 RQWARDFAILAAMPCQTAEERQIRDRKAFLLHSLFVDVSVFKAVSAIKHLVDIKQNSFSN 362

Query: 121 TATPTSYEEIAGDLTIKVTRDVSDASIKLDCKNDGNLVLELSEKELAQRNLLKGITADES 180
           +A PTSYEE  GDLTIKVTRDVSDAS+KLDCKNDGN VL LS+ ELAQRNLLKGITADES
Sbjct: 363 SALPTSYEERIGDLTIKVTRDVSDASLKLDCKNDGNRVLGLSDDELAQRNLLKGITADES 422

Query: 181 ATVHDTPTLGAVIIRHCGYTALVKVSAKTDWEGSPNSLEIDIEDQPEGGANALNVNSLRM 240
           ATVHDTPTLGAV+I HCGYTA+VKVS + D EGS NSLEIDIE+QPEGGANALNVNSLRM
Sbjct: 423 ATVHDTPTLGAVLISHCGYTAVVKVSGERDMEGSHNSLEIDIEEQPEGGANALNVNSLRM 482

Query: 241 LLHKSSTPQSSNIIQRNQSTDIE--NXXXXXXXXXXXXXXXXXXXXTTTHSKSIRWELGA 298
           LLH+SSTPQSSN IQR QS+DIE  +                    TT HSKSIRWELGA
Sbjct: 483 LLHRSSTPQSSNAIQRIQSSDIEYSHFTRSLVRKVLEESLLKLKEETTRHSKSIRWELGA 542

Query: 299 CWVQHLQNQATGXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXIDSRNSKVEQGKDIST 358
           CWVQHLQNQATG               V                ID RNSKVE GKDIS 
Sbjct: 543 CWVQHLQNQATGKTEPKKEEEAKVEPAVKGLGKQGGLLKELKKKIDIRNSKVEVGKDISP 602

Query: 359 CNGIDINKPDATQQELERQGEEKETLWKTLLPDAAYTRLKESKTDLHLKSPDELMEMAHK 418
           CNG DINKP+AT+QELERQ EEKE +WK LL DAAYTRLKESKTDLHLKSPDELMEMAHK
Sbjct: 603 CNGNDINKPEATKQELERQDEEKEIIWKKLLSDAAYTRLKESKTDLHLKSPDELMEMAHK 662

Query: 419 YYIDTALPKLVS 430
           YY+DTALPKLV+
Sbjct: 663 YYVDTALPKLVA 674


>Glyma04g24430.1 
          Length = 1817

 Score =  596 bits (1536), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 304/443 (68%), Positives = 322/443 (72%), Gaps = 13/443 (2%)

Query: 1   MKAFTEHNK-----------FGNLPYGFRANTWXXXXXXXXXXXXXXXLPMEDEIWXXXX 49
           MK FTEHNK           FGNLPYGFRANTW               LPMEDE W    
Sbjct: 96  MKTFTEHNKDVFTIIVVSFQFGNLPYGFRANTWVVPPVVSDNPSVFPPLPMEDETWGGNG 155

Query: 50  XXXXXXXKHEKRQWGRDFAILAAMPCQTAEERQLRDRKAFLLHSLFVDVSVSKAVSAIKH 109
                  KHE RQW RDFAILAAMPCQTAEERQ+RDRKAFLLHSLFVDVSV KAVSAIKH
Sbjct: 156 GGQGRDGKHENRQWARDFAILAAMPCQTAEERQIRDRKAFLLHSLFVDVSVFKAVSAIKH 215

Query: 110 FIDNTQRSFSSTATPTSYEEIAGDLTIKVTRDVSDASIKLDCKNDGNLVLELSEKELAQR 169
            +D  Q SFS++A PTSYEE  GDLTIKVTRDVSDAS+KLDCKNDGN VL LS++ELAQR
Sbjct: 216 LVDIKQNSFSNSALPTSYEERIGDLTIKVTRDVSDASLKLDCKNDGNRVLGLSDEELAQR 275

Query: 170 NLLKGITADESATVHDTPTLGAVIIRHCGYTALVKVSAKTDWEGSPNSLEIDIEDQPEGG 229
           NLLKGITADESATVHDTPTLGAV+IRHCGYTA+VKVS   D EGSPNSLEIDIE+QPEGG
Sbjct: 276 NLLKGITADESATVHDTPTLGAVLIRHCGYTAVVKVSGDRDLEGSPNSLEIDIEEQPEGG 335

Query: 230 ANALNVNSLRMLLHKSSTPQSSNIIQRNQSTDIE--NXXXXXXXXXXXXXXXXXXXXTTT 287
           ANALNVNSLRMLLH+ STPQSSN IQR QSTDIE  +                    TT 
Sbjct: 336 ANALNVNSLRMLLHRPSTPQSSNAIQRIQSTDIECSHSTRSLVRKVLEESLLKLKEETTR 395

Query: 288 HSKSIRWELGACWVQHLQNQATGXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXIDSRN 347
           HSKSIRWELGACWVQHLQNQATG               V                ID RN
Sbjct: 396 HSKSIRWELGACWVQHLQNQATGKTEPKKAEEGKVEPAVKGLGKQGGLLKELKKKIDIRN 455

Query: 348 SKVEQGKDISTCNGIDINKPDATQQELERQGEEKETLWKTLLPDAAYTRLKESKTDLHLK 407
           SK E GKDIS CNG DINKP+AT+QELERQ EEK T+WK LL DAAYTRLKESKTDLHLK
Sbjct: 456 SKAEVGKDISPCNGNDINKPEATKQELERQDEEKATIWKKLLSDAAYTRLKESKTDLHLK 515

Query: 408 SPDELMEMAHKYYIDTALPKLVS 430
           SPDELMEMAHKYY++TALPKLV+
Sbjct: 516 SPDELMEMAHKYYVETALPKLVA 538


>Glyma07g06160.1 
          Length = 1716

 Score =  301 bits (772), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 173/435 (39%), Positives = 236/435 (54%), Gaps = 7/435 (1%)

Query: 1   MKAFTEHNKFGNLPYGFRANTWXXXXXXXXXXXXXXXLPMEDEIWXXXXXXXXXXXKHEK 60
           +KAF+E NKFGNLPYGFRANTW               LP+EDE W           K++ 
Sbjct: 236 LKAFSERNKFGNLPYGFRANTWLVPPVAAQSPSSFPPLPVEDETWGGNGGGLGRDGKYDL 295

Query: 61  RQWGRDFAILAAMPCQTAEERQLRDRKAFLLHSLFVDVSVSKAVSAIKHFIDNTQRSFSS 120
             W  +F+ +A+MPC TAEERQ+RDRKAFLLHSLFVDV++ +A+ AIK+ ++  + S S 
Sbjct: 296 VPWANEFSFIASMPCNTAEERQVRDRKAFLLHSLFVDVAIFRAIKAIKYVMEEPKFSCSI 355

Query: 121 TATPTSYEEIAGDLTIKVTRDVSDASIKLDCKNDGNLVLELSEKELAQRNLLKGITADES 180
                 Y E  GDL I V +DVS AS K+D K D      +++K+L +RN+LKGITADE+
Sbjct: 356 VENNIIYTERVGDLNINVLKDVSVASYKIDTKIDRVEATGVNQKDLLERNILKGITADEN 415

Query: 181 ATVHDTPTLGAVIIRHCGYTALVKVSAKTDWE-GSPNSLEIDIEDQPEGGANALNVNSLR 239
              HD  TLG + +R+CGY   VKV    +    SP+   I++ DQPEGGANALN+NSLR
Sbjct: 416 TAAHDITTLGVINVRYCGYVVTVKVERGVNENVDSPSQQNIELFDQPEGGANALNINSLR 475

Query: 240 MLLHKSSTPQSSNIIQRNQSTDIENXXXXXXXXXXXXXXXXXXXXTTTHSKS--IRWELG 297
           +LLH ++ P+++  + + Q+ + E                              +RWELG
Sbjct: 476 LLLHNTTPPENNKPMSQIQTFESEEFGASHAFLEKLIKESLAKLEEEEPGIDYFVRWELG 535

Query: 298 ACWVQHLQNQ-ATGXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXIDSRNSKVEQGKDI 356
           ACW+QHLQ+Q  T                V                 DS N+      + 
Sbjct: 536 ACWIQHLQDQNNTEKDKKLSLEKAKNEMKVEGLGKPLKALKNYKKKSDSSNTN--SATEY 593

Query: 357 STCNGIDINKP-DATQQELERQGEEKETLWKTLLPDAAYTRLKESKTDLHLKSPDELMEM 415
           S  N    + P  + + +LE    E E + K +L + A+TRLKES T LH KS  +L+ +
Sbjct: 594 SKFNREAESPPFPSIESQLETTEAENELVLKRILSEEAFTRLKESGTGLHCKSMHDLINL 653

Query: 416 AHKYYIDTALPKLVS 430
           + KYY D ALPKLV+
Sbjct: 654 SRKYYTDVALPKLVA 668


>Glyma16g02770.1 
          Length = 1873

 Score =  296 bits (759), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 176/435 (40%), Positives = 239/435 (54%), Gaps = 7/435 (1%)

Query: 1   MKAFTEHNKFGNLPYGFRANTWXXXXXXXXXXXXXXXLPMEDEIWXXXXXXXXXXXKHEK 60
           +KAF+E NKFGNLPYGFRANTW               LP+EDE+W           K++ 
Sbjct: 313 LKAFSERNKFGNLPYGFRANTWLVPPVAAQSPSYFPPLPVEDEMWGGNGGGLGRDGKYDL 372

Query: 61  RQWGRDFAILAAMPCQTAEERQLRDRKAFLLHSLFVDVSVSKAVSAIKHFIDNTQRSFSS 120
             W  +F+ +A+MPC+TAEERQ+RDRKAFLLHSLFVDV++ +A+ AIKH ++    S S 
Sbjct: 373 VPWANEFSFIASMPCKTAEERQVRDRKAFLLHSLFVDVAIFRAIKAIKHVMEEPNFSCSV 432

Query: 121 TATPTSYEEIAGDLTIKVTRDVSDASIKLDCKNDGNLVLELSEKELAQRNLLKGITADES 180
                 Y E  GDL I V +D S AS K+D K DG     +++K+L +RNL+KGITADE+
Sbjct: 433 VENNIIYTERVGDLNINVLKDGSVASCKIDTKIDGVEATGVNQKDLLERNLMKGITADEN 492

Query: 181 ATVHDTPTLGAVIIRHCGYTALVKVSAKTDWE-GSPNSLEIDIEDQPEGGANALNVNSLR 239
              HD  TLG + +R+CGY  +VKV    +    SP+   I++ DQPEGGANALN+NSLR
Sbjct: 493 TAAHDITTLGVINVRYCGYVVVVKVEGGVNENVDSPSQQNIELFDQPEGGANALNINSLR 552

Query: 240 MLLHKSSTPQSSNIIQRNQSTDIENXXXXXXXXXXXXXXXXXXXXTTTHSKS--IRWELG 297
           +LLH +++P+++  + + Q+ + E                              +RWELG
Sbjct: 553 LLLHNTTSPENNKPVSQIQTFESEELGASHAFVEKLIKENLAKLEEEEPGIDYFVRWELG 612

Query: 298 ACWVQHLQNQ-ATGXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXIDSRNSKVEQGKDI 356
           ACWVQHLQ+Q  T                V                 DS N+      + 
Sbjct: 613 ACWVQHLQDQNNTEKDKKPSSEKAKNEMKVEGLGKPLKALKNYKKKSDSSNNN--SATEY 670

Query: 357 STCNGIDINKP-DATQQELERQGEEKETLWKTLLPDAAYTRLKESKTDLHLKSPDELMEM 415
           S  N    + P  + + + E    E E + K +L D A+TRLKES T LH KS  +L+E+
Sbjct: 671 SKFNREAESSPLPSIESQHETTEAENELVLKGMLSDEAFTRLKESGTGLHCKSMHDLIEL 730

Query: 416 AHKYYIDTALPKLVS 430
           + KYY D ALPKLV+
Sbjct: 731 SRKYYTDVALPKLVA 745


>Glyma08g22850.1 
          Length = 1550

 Score =  290 bits (741), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 170/435 (39%), Positives = 226/435 (51%), Gaps = 17/435 (3%)

Query: 1   MKAFTEHNKFGNLPYGFRANTWXXXXXXXXXXXXXXXLPMEDEIWXXXXXXXXXXXKHEK 60
           MKAF E NKFGNLPYGFRANTW               LP EDE W             + 
Sbjct: 215 MKAFLERNKFGNLPYGFRANTWLVPPSVAESPSNFPALPAEDENWGGNGGGHQRNGALDH 274

Query: 61  RQWGRDFAILAAMPCQTAEERQLRDRKAFLLHSLFVDVSVSKAVSAIKHFID---NTQRS 117
           R W  DFAILA++PC+T EER +RDRKAFLLHS FVD S+ KAV+AI+H ++   N +  
Sbjct: 275 RSWATDFAILASLPCKTEEERVVRDRKAFLLHSQFVDTSIFKAVAAIQHVMESKSNIKSE 334

Query: 118 FSSTATPTSYEEIAGDLTIKVTRDVSDASIKLDCKNDGNLVLELSEKELAQRNLLKGITA 177
            +S+     +E++ GDL+I V RD+ D + K D   D + + E      AQ+NL+KG+TA
Sbjct: 335 LNSSPGSVLHEDLTGDLSIIVKRDIQDGNTKYDSILDESSMHEGD----AQKNLIKGLTA 390

Query: 178 DESATVHDTPTLGAVIIRHCGYTALVKVSAKTDWEGSPNSLEIDIEDQPEGGANALNVNS 237
           DES  VHDT +L  V++ HCGYTA VKV    +    P   +I+I+D P+GGANALN+NS
Sbjct: 391 DESVIVHDTSSLAVVVVHHCGYTATVKVVGNVNVR-KPEVRDIEIDDLPDGGANALNINS 449

Query: 238 LRMLLHKSSTPQSSNIIQRNQSTDIENXXXXXXXXXXXXXXXXXXXXTTTHSKSIRWELG 297
           LR+LLHKS        +    ++D  +                     +   +SIRWELG
Sbjct: 450 LRVLLHKSGAETLEGTLSSLSNSDDLDASKVLVKKVVQECMEKIKGEPSASKRSIRWELG 509

Query: 298 ACWVQHLQNQATGXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXIDSRN---SKVEQGK 354
           +CW+QHLQ   T                                   S N   +  ++  
Sbjct: 510 SCWIQHLQKHETSTDSSSKNKEDGKDVDQAVKGLGKQFKLLKRREKKSNNLDGADFKEQN 569

Query: 355 DISTCNGIDI-NKPDATQQELERQGEEKETLWKTLLPDAAYTRLKESKTDLHLKSPDELM 413
           D    N  D+ +K +    +L    E      + LL + ++ RLKES T LH KS DEL+
Sbjct: 570 DSRLANMDDVADKVEPNNDDLSNSNE-----LEKLLSEESFLRLKESGTGLHTKSVDELI 624

Query: 414 EMAHKYYIDTALPKL 428
            MAHK+Y + ALPKL
Sbjct: 625 SMAHKFYDEVALPKL 639


>Glyma07g03250.1 
          Length = 1636

 Score =  289 bits (740), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 171/437 (39%), Positives = 231/437 (52%), Gaps = 21/437 (4%)

Query: 1   MKAFTEHNKFGNLPYGFRANTWXXXXXXXXXXXXXXXLPMEDEIWXXXXXXXXXXXKHEK 60
           MKAF E NKFGNLPYGFRANTW               LP EDE W           + E 
Sbjct: 241 MKAFLERNKFGNLPYGFRANTWLVPPSVAESPSIFPALPAEDENWGGNGGGQGRNGEFEL 300

Query: 61  RQWGRDFAILAAMPCQTAEERQLRDRKAFLLHSLFVDVSVSKAVSAIKHFID---NTQRS 117
           R W  DFAILA++PC+T EER +RDRKAFLLHS FVD S+ K V+AI+H ++   NT+  
Sbjct: 301 RPWATDFAILASLPCKTEEERVVRDRKAFLLHSQFVDTSIFKGVAAIQHAMESKLNTKNE 360

Query: 118 FSSTATPTSYEEIAGDLTIKVTRDVSDASIKLDCKNDGNLVLELSEKEL-AQRNLLKGIT 176
            +S      +E+  GDL+I V RD+ D + K +     +L+ E S  ++ AQ+NLLKG+T
Sbjct: 361 LNSYPDSVLHEDHVGDLSIIVKRDIQDGNAKYN-----SLLDESSMHKVDAQKNLLKGLT 415

Query: 177 ADESATVHDTPTLGAVIIRHCGYTALVKVSAKTDWEGSPNSLEIDIEDQPEGGANALNVN 236
           ADES  VHD  +L  V++ HCGYTA VKV    +    P   +I+I+DQP+GGANALN+N
Sbjct: 416 ADESVIVHDMSSLAVVVVHHCGYTATVKVVGNVNTR-KPKVRDIEIDDQPDGGANALNIN 474

Query: 237 SLRMLLHKSSTPQSSNIIQRNQSTDIENXXXXXXXXXXXXXXXXXXXXTTTHSKSIRWEL 296
           SLR+LLHKS        +    +++  +                     +   +SIRWEL
Sbjct: 475 SLRVLLHKSGAESLEGTLSSLSNSNDLDASKVLVRKVVQECMEKIKEEPSASERSIRWEL 534

Query: 297 GACWVQHLQNQATGXXXXXXXXX-----XXXXXXVXXXXXXXXXXXXXXXXIDSRNSKVE 351
           G+CW+QHLQ Q T                     +                +D  +S+ +
Sbjct: 535 GSCWIQHLQKQETSTDNSSKNKEDGNDLEQAVKGLGKQFKFLKRREKKSNNLDGADSREQ 594

Query: 352 QGKDISTCNGIDINKPDATQQELERQGEEKETLWKTLLPDAAYTRLKESKTDLHLKSPDE 411
               ++  N +  +K +    +L    E      + LL + A+ RLKES T LH KS DE
Sbjct: 595 NDSRLANMNDV-ADKVEPNNDDLSNSNE-----LEKLLSEEAFLRLKESGTGLHTKSVDE 648

Query: 412 LMEMAHKYYIDTALPKL 428
           L+ MAHK+Y + ALPKL
Sbjct: 649 LISMAHKFYDEVALPKL 665