Miyakogusa Predicted Gene
- Lj0g3v0258489.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0258489.1 Non Chatacterized Hit- tr|K3Y203|K3Y203_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si008222,38.33,4e-17,RIX1,NULL,CUFF.17000.1
(180 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma16g03070.1 202 2e-52
Glyma07g06460.2 199 1e-51
Glyma07g06460.1 190 7e-49
>Glyma16g03070.1
Length = 842
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 134/190 (70%), Gaps = 21/190 (11%)
Query: 1 MVAFDHFVDDMNDVELKPRLLDTLISDSL-------SNPSEISKVISLVKTHALLSESFT 53
M AFDHF +M DV KPRLL TLI D L SNPSE+SKV+SL+KTH+LLSESF
Sbjct: 1 MAAFDHF-GNMYDVAFKPRLLQTLIRDHLPDEKRPFSNPSELSKVVSLIKTHSLLSESFA 59
Query: 54 ESMNPELVEHWKSAVTSWFQRTWTLL---FSDKYCWAGISLLGVTCQECSAHRFIDSYSM 110
+S P+L+E KSA+TSW R ++LL DK C AGISLLGVTC+ECS+ RF++SYS+
Sbjct: 60 DSTRPKLIEASKSALTSWLNRIYSLLSTTMPDK-CLAGISLLGVTCEECSSERFLESYSV 118
Query: 111 WFHKLLTFLQAPADSHRVRVASCASISALFARLSGFPKLNKYGVSYAVKVIQPVLRMIQD 170
WF KLL+FLQ +A+ + S L RL G+PK+ K S AVKV+QP L+M+ D
Sbjct: 119 WFQKLLSFLQ---------LAATCTNSLLQNRLGGYPKIKKDSSSCAVKVVQPTLKMLND 169
Query: 171 ENSEAIWEAA 180
ENSEAIW+AA
Sbjct: 170 ENSEAIWDAA 179
>Glyma07g06460.2
Length = 276
Score = 199 bits (506), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 134/190 (70%), Gaps = 21/190 (11%)
Query: 1 MVAFDHFVDDMNDVELKPRLLDTLISDSL-------SNPSEISKVISLVKTHALLSESFT 53
M AFDHF +M DV KPRLL TLI D L SNPSE+SKV+SL+KTH+LLSESF
Sbjct: 1 MAAFDHF-GNMYDVAFKPRLLQTLIRDHLPDEKRPFSNPSELSKVVSLIKTHSLLSESFA 59
Query: 54 ESMNPELVEHWKSAVTSWFQRTWTLL---FSDKYCWAGISLLGVTCQECSAHRFIDSYSM 110
+S P+L+E WKSA+ SW ++LL DK CWAGISLLGVTC+ECS+ RF++SYS+
Sbjct: 60 DSTRPKLIEAWKSALASWLNLIYSLLSTTMPDK-CWAGISLLGVTCEECSSERFLESYSV 118
Query: 111 WFHKLLTFLQAPADSHRVRVASCASISALFARLSGFPKLNKYGVSYAVKVIQPVLRMIQD 170
WF KLL+FLQ +A+ + S L RL G+PK+ K S AVKV+QP L+++ D
Sbjct: 119 WFQKLLSFLQ---------LAATCTNSLLQNRLGGYPKIKKDSSSCAVKVVQPTLKILND 169
Query: 171 ENSEAIWEAA 180
ENSEAIW+AA
Sbjct: 170 ENSEAIWDAA 179
>Glyma07g06460.1
Length = 1038
Score = 190 bits (482), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 97/152 (63%), Positives = 117/152 (76%), Gaps = 12/152 (7%)
Query: 1 MVAFDHFVDDMNDVELKPRLLDTLISDSL-------SNPSEISKVISLVKTHALLSESFT 53
M AFDHF +M DV KPRLL TLI D L SNPSE+SKV+SL+KTH+LLSESF
Sbjct: 1 MAAFDHF-GNMYDVAFKPRLLQTLIRDHLPDEKRPFSNPSELSKVVSLIKTHSLLSESFA 59
Query: 54 ESMNPELVEHWKSAVTSWFQRTWTLL---FSDKYCWAGISLLGVTCQECSAHRFIDSYSM 110
+S P+L+E WKSA+ SW ++LL DK CWAGISLLGVTC+ECS+ RF++SYS+
Sbjct: 60 DSTRPKLIEAWKSALASWLNLIYSLLSTTMPDK-CWAGISLLGVTCEECSSERFLESYSV 118
Query: 111 WFHKLLTFLQAPADSHRVRVASCASISALFAR 142
WF KLL+FLQ+PADSH VRVA+CAS+S LFAR
Sbjct: 119 WFQKLLSFLQSPADSHLVRVAACASMSDLFAR 150
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 127 RVRVASCASISALFARLSGFPKLNKYGVSYAVKVIQPVLRMIQDENSEAIWEAA 180
++ +A+ + S L RL G+PK+ K S AVKV+QP L+++ DENSEAIW+AA
Sbjct: 239 KLELAATCTNSLLQNRLGGYPKIKKDSSSCAVKVVQPTLKILNDENSEAIWDAA 292