Miyakogusa Predicted Gene

Lj0g3v0258079.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0258079.1 Non Chatacterized Hit- tr|K4CQZ2|K4CQZ2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,57.32,6e-19,seg,NULL; PROTEASE U48 CAAX PRENYL PROTEASE
RCE1,NULL,CUFF.16968.1
         (118 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g22010.1                                                       124   2e-29

>Glyma13g22010.1 
          Length = 319

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/87 (72%), Positives = 73/87 (83%), Gaps = 1/87 (1%)

Query: 24  QDGVVSKPVAVSACVAMALLYVASLYAPTVLFRLPPPSSLNSFMIRRFLCAAVSTVLSLF 83
           +DGVVS+PVAV AC+AMA+ YVA LYAPTVL RLPPP S  ++MIRRFLCA VS+VLSLF
Sbjct: 3   RDGVVSQPVAVIACIAMAVFYVAILYAPTVLLRLPPPPSFKTYMIRRFLCAVVSSVLSLF 62

Query: 84  LSALILPV-TKELPYIFGAYGIRGDHI 109
           +SALILPV TKEL +I   +GIR DHI
Sbjct: 63  ISALILPVQTKELRHILVVFGIRRDHI 89