Miyakogusa Predicted Gene
- Lj0g3v0257769.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0257769.2 Non Chatacterized Hit- tr|I3S057|I3S057_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.55,0,seg,NULL;
NAC,Nascent polypeptide-associated complex NAC;
UBA,Ubiquitin-associated/translation elong,CUFF.16952.2
(220 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g40550.1 202 3e-52
Glyma04g40540.1 197 6e-51
Glyma06g14250.1 194 4e-50
Glyma06g14260.1 193 1e-49
Glyma04g40550.3 184 4e-47
Glyma04g40550.2 180 1e-45
Glyma19g30540.1 145 4e-35
Glyma03g27580.2 145 4e-35
Glyma03g27580.1 145 4e-35
Glyma03g27570.1 143 1e-34
Glyma19g30550.1 143 2e-34
>Glyma04g40550.1
Length = 223
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 125/226 (55%), Gaps = 9/226 (3%)
Query: 1 MSPGTVLDASS--DDHQQLPSATD--DKKKPQPQE--YXXXXXXXXXXXXXXXXXXXXXX 54
MSPG V+DAS D QQLPS D KK PQPQE
Sbjct: 1 MSPGPVVDASPEVDAEQQLPSVDDATQKKIPQPQEDDAPLVEDLKDDDKDDDDEDDDDDD 60
Query: 55 XXXXXXGAQGTTEGXXXXXXXXXXXXAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVF 114
AQG EG AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVF
Sbjct: 61 EDDKEDDAQGGAEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVF 120
Query: 115 KSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXX 174
KSPNSETYVIFGEAKIED FRMPDM S
Sbjct: 121 KSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGS---VTAKQEDAAAAAAQPEEEE 177
Query: 175 XXXXXXXXPHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 220
PHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT
Sbjct: 178 EVDETGVEPHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 223
>Glyma04g40540.1
Length = 218
Score = 197 bits (502), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 120/222 (54%), Positives = 123/222 (55%), Gaps = 6/222 (2%)
Query: 1 MSPGTVLDASSDDHQQLPSATDD--KKKPQPQEYXXXXXXXXXXXXXXXXXXXXXXXXXX 58
MSPG VLDA +D QQ+P D KKKP P E
Sbjct: 1 MSPGPVLDAGAD--QQIPFVDDASLKKKPHPLEDDAPIVEDVKDDDKDETEDEDEDDDDK 58
Query: 59 XXGAQGTTEGXXXXXXXXXXXXAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPN 118
AQG EG AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPN
Sbjct: 59 EDDAQGAAEGGKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPN 118
Query: 119 SETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXXXXXX 178
SETYVIFGEAKIED FRMPD+ S
Sbjct: 119 SETYVIFGEAKIEDLSSQLQTQAAQQFRMPDVES--VLAKQDQDAAAAAAQPEEEEEVDE 176
Query: 179 XXXXPHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 220
PHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT
Sbjct: 177 TGVEPHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 218
>Glyma06g14250.1
Length = 223
Score = 194 bits (494), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/226 (53%), Positives = 123/226 (54%), Gaps = 9/226 (3%)
Query: 1 MSPGTVLDASSD--DHQQLPSATD--DKKKPQPQE--YXXXXXXXXXXXXXXXXXXXXXX 54
MSPG V+DAS + QQLPS D KK QPQE
Sbjct: 1 MSPGPVVDASPEVEAEQQLPSVDDATQLKKSQPQEDDAPVVEDVRDDDKDDDDEDDDDDD 60
Query: 55 XXXXXXGAQGTTEGXXXXXXXXXXXXAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVF 114
A G EG AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVF
Sbjct: 61 EDDKEDDALGGAEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVF 120
Query: 115 KSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXX 174
KSPNSETYVIFGEAKIED FRMPDM S
Sbjct: 121 KSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGS---VTAKQEDAAAAAVQPEEEE 177
Query: 175 XXXXXXXXPHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 220
PHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT
Sbjct: 178 EVDETGVEPHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 223
>Glyma06g14260.1
Length = 225
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/226 (52%), Positives = 125/226 (55%), Gaps = 7/226 (3%)
Query: 1 MSPGTVLDASSD--DHQQLPSATDD--KKKPQPQE--YXXXXXXXXXXXXXXXXXXXXXX 54
MSPG V+DA++D QQ+PS D KKK PQE
Sbjct: 1 MSPGPVIDAATDPGADQQIPSVDDAILKKKAHPQEDDAPIVEDVKDDDKEETEDEDEDDD 60
Query: 55 XXXXXXGAQGTTEGXXXXXXXXXXXXAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVF 114
AQG EG AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVF
Sbjct: 61 DDDKEDDAQGGAEGGKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVF 120
Query: 115 KSPNSETYVIFGEAKIEDXXXXXXXXXXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXX 174
KSPNSETY+IFGEAKIED FRMPD+ S
Sbjct: 121 KSPNSETYIIFGEAKIEDLSSQLQTQAAQQFRMPDVGS-VLAKQDQDAAAAAAQPEEEEE 179
Query: 175 XXXXXXXXPHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 220
PHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT
Sbjct: 180 EVDETGVEPHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 225
>Glyma04g40550.3
Length = 162
Score = 184 bits (468), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 100/158 (63%), Gaps = 3/158 (1%)
Query: 63 QGTTEGXXXXXXXXXXXXAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETY 122
Q EG AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETY
Sbjct: 8 QSGAEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETY 67
Query: 123 VIFGEAKIEDXXXXXXXXXXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
VIFGEAKIED FRMPDM S
Sbjct: 68 VIFGEAKIEDLSSQLQTQAAQQFRMPDMGS---VTAKQEDAAAAAAQPEEEEEVDETGVE 124
Query: 183 PHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 220
PHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT
Sbjct: 125 PHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 162
>Glyma04g40550.2
Length = 136
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/139 (69%), Positives = 96/139 (69%), Gaps = 3/139 (2%)
Query: 82 MLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXXX 141
MLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIED
Sbjct: 1 MLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQA 60
Query: 142 XXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHDIDLVMTQAGVSRSKAV 201
FRMPDM S PHDIDLVMTQAGVSRSKAV
Sbjct: 61 AQQFRMPDMGS---VTAKQEDAAAAAAQPEEEEEVDETGVEPHDIDLVMTQAGVSRSKAV 117
Query: 202 KALKTHNGDIVGAIMELTT 220
KALKTHNGDIVGAIMELTT
Sbjct: 118 KALKTHNGDIVGAIMELTT 136
>Glyma19g30540.1
Length = 202
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 89/140 (63%), Gaps = 7/140 (5%)
Query: 81 AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXX 140
AMLKLG+KPVTGVSRVT+K++KNILF ISKPDVFKSP SETY+IFGEAKIED
Sbjct: 70 AMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSETYIIFGEAKIEDLSSQLQTQ 129
Query: 141 XXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHDIDLVMTQAGVSRSKA 200
F+ P++++ P DI+LVMTQAGVSR KA
Sbjct: 130 AAEQFKAPNLSN-------VGLKPESSAVAQDDEEVDEAGVDPKDIELVMTQAGVSRPKA 182
Query: 201 VKALKTHNGDIVGAIMELTT 220
VKALK +GDIV AIMELT
Sbjct: 183 VKALKAASGDIVAAIMELTN 202
>Glyma03g27580.2
Length = 197
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 89/139 (64%), Gaps = 6/139 (4%)
Query: 81 AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXX 140
AMLKLG+KPVTGVSRVT+K++KNILF ISKPDVFKSP S+TY+IFGEAKIED
Sbjct: 64 AMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQ 123
Query: 141 XXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHDIDLVMTQAGVSRSKA 200
F+ P++++ P DI+LVMTQAGV RS+A
Sbjct: 124 AAEQFKAPNVSN------DGSKPETSAAAAQDDEDVDETGVDPKDIELVMTQAGVLRSRA 177
Query: 201 VKALKTHNGDIVGAIMELT 219
VKALK NGDIV AIMELT
Sbjct: 178 VKALKAANGDIVAAIMELT 196
>Glyma03g27580.1
Length = 198
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 89/139 (64%), Gaps = 6/139 (4%)
Query: 81 AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXX 140
AMLKLG+KPVTGVSRVT+K++KNILF ISKPDVFKSP S+TY+IFGEAKIED
Sbjct: 65 AMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQ 124
Query: 141 XXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHDIDLVMTQAGVSRSKA 200
F+ P++++ P DI+LVMTQAGV RS+A
Sbjct: 125 AAEQFKAPNVSN------DGSKPETSAAAAQDDEDVDETGVDPKDIELVMTQAGVLRSRA 178
Query: 201 VKALKTHNGDIVGAIMELT 219
VKALK NGDIV AIMELT
Sbjct: 179 VKALKAANGDIVAAIMELT 197
>Glyma03g27570.1
Length = 203
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 88/140 (62%), Gaps = 7/140 (5%)
Query: 81 AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXX 140
AMLKLG+KPVTGVSRVT+K++KNILF ISKPDVFKSP S+TY+IFGEAKIED
Sbjct: 71 AMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQ 130
Query: 141 XXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHDIDLVMTQAGVSRSKA 200
F+ P++++ P DI+LVMTQAGVSR KA
Sbjct: 131 AAEQFKAPNLSN-------VGSKPESSAVAQDDEEVDEAGVDPKDIELVMTQAGVSRPKA 183
Query: 201 VKALKTHNGDIVGAIMELTT 220
VKALK GDIV AIMELT
Sbjct: 184 VKALKAAGGDIVAAIMELTN 203
>Glyma19g30550.1
Length = 201
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 88/140 (62%), Gaps = 7/140 (5%)
Query: 81 AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXX 140
AMLKLG+KPVTGVSRVT+K++KNILF ISKPDVFKSP S+TY+IFGEAKIED
Sbjct: 69 AMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQ 128
Query: 141 XXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHDIDLVMTQAGVSRSKA 200
F+ P++++ P DI+LVMTQAGVSR KA
Sbjct: 129 AAEQFKAPNLSN-------DGLKPESSAVAQDDEEVDEAGVDPKDIELVMTQAGVSRPKA 181
Query: 201 VKALKTHNGDIVGAIMELTT 220
VKALK GDIV AIMELT
Sbjct: 182 VKALKAAGGDIVAAIMELTN 201