Miyakogusa Predicted Gene

Lj0g3v0257719.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0257719.1 Non Chatacterized Hit- tr|H2M5X2|H2M5X2_ORYLA
Uncharacterized protein OS=Oryzias latipes GN=MBD4
PE=,37.32,5e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; 5-METHYLCYTOSINE
G/T MISMATCH-SPECIFIC DNA GLYCOSYLASE,NULL; HhH,CUFF.16947.1
         (207 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g11620.1                                                       195   2e-50

>Glyma13g11620.1 
          Length = 259

 Score =  195 bits (496), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 95/181 (52%), Positives = 125/181 (69%), Gaps = 8/181 (4%)

Query: 30  EEKLPDVVNK---VNKILSVSEKKDEAYKRITSDIKWVPPQSDICLIQQEHFQDPWKVMA 86
           EE   +  NK   + +    SEK DEAYKR T D  W PP+S+I LIQ++H  DPW+V+ 
Sbjct: 84  EENKSNCSNKSIEIKRFPPASEKWDEAYKRKTPDNTWKPPRSEIVLIQEDHLHDPWRVLV 143

Query: 87  ICILLNNTTDTDEVRLAISNLFSLCPNATTCTQVSKDKIEETIHDILYYKQKTARLQKFS 146
           IC+LLN T    + +  +SN F LCP+A +CTQV++++IE+TI  + +  ++   LQ+ S
Sbjct: 144 ICMLLNRTAG-GQTKKVVSNFFKLCPDAKSCTQVTREEIEKTIKTLGFQHKRAEMLQRLS 202

Query: 147 EEYLNENWTHVTYLHGIGKYAADAYAIFCTGKWQRVTPAAGQNDHKLLDYWKFLHTIKHT 206
           EEYL+E+WTHVT LHG+GKYAADAYAIF TG W RVTP     DH L  YW+FLH+IKH 
Sbjct: 203 EEYLDESWTHVTQLHGVGKYAADAYAIFVTGMWDRVTPT----DHMLNYYWEFLHSIKHE 258

Query: 207 L 207
           L
Sbjct: 259 L 259