Miyakogusa Predicted Gene

Lj0g3v0257619.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0257619.1 Non Chatacterized Hit- tr|B9RGK0|B9RGK0_RICCO
WD-repeat protein, putative OS=Ricinus communis GN=RCO,34.71,6e-19,WD
REPEAT PROTEIN 26-RELATED,NULL; C-terminal to LisH motif.,CTLH,
C-terminal LisH motif; LISH,LisH ,CUFF.16948.1
         (173 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g35380.1                                                       194   3e-50
Glyma19g35380.2                                                       105   3e-23
Glyma02g45200.1                                                        91   5e-19
Glyma08g41670.1                                                        90   1e-18
Glyma18g14400.2                                                        88   5e-18
Glyma18g14400.1                                                        88   5e-18
Glyma14g03550.2                                                        87   9e-18
Glyma14g03550.1                                                        87   9e-18
Glyma03g32630.1                                                        53   2e-07

>Glyma19g35380.1 
          Length = 523

 Score =  194 bits (494), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 102/161 (63%), Positives = 121/161 (75%), Gaps = 2/161 (1%)

Query: 5   NHSEVLIGSKALFKKHEFVRIIVQCLYSLGYSKSASCLEVESGVLFKSKEFQLLESHVLN 64
           N  EVL GSK L ++HEFVRII+QCLYSLGYS SASCLE ESG+ +KS E +LLES +LN
Sbjct: 3   NPCEVL-GSKGLIRRHEFVRIIIQCLYSLGYSSSASCLESESGISYKSNEVKLLESLILN 61

Query: 65  GNWDGCIGFLNSMRDIMGEAVESALFLVLRQCLMEYIKHGEVTLALDVLRKRVSALHLDR 124
           G+WD  I +LNS++D +GE  ESALFLV RQC+MEY+  GE  LAL VLRK+VSAL   +
Sbjct: 62  GSWDESIDYLNSIKDELGETRESALFLVFRQCVMEYLNCGEYALALGVLRKQVSALDAGK 121

Query: 125 YKVHSLANSMLSLKDTEIGGAVDGD-AVRDLRRKLLTDLEK 164
            KVHS A  +LS KD E+G    GD  V DLR+KLL DLEK
Sbjct: 122 CKVHSFAKCLLSFKDRELGAVDGGDVVVHDLRKKLLADLEK 162


>Glyma19g35380.2 
          Length = 462

 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/78 (65%), Positives = 63/78 (80%), Gaps = 1/78 (1%)

Query: 5  NHSEVLIGSKALFKKHEFVRIIVQCLYSLGYSKSASCLEVESGVLFKSKEFQLLESHVLN 64
          N  EVL GSK L ++HEFVRII+QCLYSLGYS SASCLE ESG+ +KS E +LLES +LN
Sbjct: 3  NPCEVL-GSKGLIRRHEFVRIIIQCLYSLGYSSSASCLESESGISYKSNEVKLLESLILN 61

Query: 65 GNWDGCIGFLNSMRDIMG 82
          G+WD  I +LNS++D +G
Sbjct: 62 GSWDESIDYLNSIKDELG 79


>Glyma02g45200.1 
          Length = 573

 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 74/133 (55%)

Query: 4   SNHSEVLIGSKALFKKHEFVRIIVQCLYSLGYSKSASCLEVESGVLFKSKEFQLLESHVL 63
           S   E ++GSK + KK EFVRII + LYSLGY KS + LE ESG+  +S    L    +L
Sbjct: 47  SKEDEHVVGSKGVIKKEEFVRIIAKALYSLGYGKSGAHLEEESGIPLQSPGVNLFRQQIL 106

Query: 64  NGNWDGCIGFLNSMRDIMGEAVESALFLVLRQCLMEYIKHGEVTLALDVLRKRVSALHLD 123
           +GNWD  +  L  +       V SA FL+L Q   E +   +V  AL  LR  ++ L ++
Sbjct: 107 DGNWDDSVATLYKIGLADESMVRSASFLILEQKFFELLNGEKVMEALKTLRTEIAPLCIN 166

Query: 124 RYKVHSLANSMLS 136
             ++  L++ ++S
Sbjct: 167 NSRIRELSSCLVS 179


>Glyma08g41670.1 
          Length = 581

 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 71/127 (55%)

Query: 10  LIGSKALFKKHEFVRIIVQCLYSLGYSKSASCLEVESGVLFKSKEFQLLESHVLNGNWDG 69
           +IGSK + K+ EFVRII + LYSLGY KS + LE ESG+   S        H+L+G+WD 
Sbjct: 54  VIGSKGVIKREEFVRIITKALYSLGYKKSGARLEEESGIPLHSSVVNQFMQHILDGHWDE 113

Query: 70  CIGFLNSMRDIMGEAVESALFLVLRQCLMEYIKHGEVTLALDVLRKRVSALHLDRYKVHS 129
            +  LN +       V +A FL+L Q   E +   +V  AL  LR  ++ L  D  ++  
Sbjct: 114 SVATLNKIGLADENVVRAASFLILEQKFFELLDGEKVMDALKTLRTEITPLCSDSSRIRE 173

Query: 130 LANSMLS 136
           L++ MLS
Sbjct: 174 LSSRMLS 180


>Glyma18g14400.2 
          Length = 580

 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 71/127 (55%)

Query: 10  LIGSKALFKKHEFVRIIVQCLYSLGYSKSASCLEVESGVLFKSKEFQLLESHVLNGNWDG 69
           +IGSK + K+ EFVRII + LYSLGY KS   LE ESG+   S    L    +L+G+WD 
Sbjct: 53  VIGSKGVIKREEFVRIITKALYSLGYKKSGVRLEEESGIPLHSSVVNLFMQQILDGHWDE 112

Query: 70  CIGFLNSMRDIMGEAVESALFLVLRQCLMEYIKHGEVTLALDVLRKRVSALHLDRYKVHS 129
            I  LN +       V++A FL+L Q   E +   +V  AL  LR  ++ L  D  ++  
Sbjct: 113 SIVTLNKIGLADENVVQAASFLILEQKFFELLDGEKVMDALKTLRTEITPLCSDSSRIRE 172

Query: 130 LANSMLS 136
           L++ MLS
Sbjct: 173 LSSRMLS 179


>Glyma18g14400.1 
          Length = 580

 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 71/127 (55%)

Query: 10  LIGSKALFKKHEFVRIIVQCLYSLGYSKSASCLEVESGVLFKSKEFQLLESHVLNGNWDG 69
           +IGSK + K+ EFVRII + LYSLGY KS   LE ESG+   S    L    +L+G+WD 
Sbjct: 53  VIGSKGVIKREEFVRIITKALYSLGYKKSGVRLEEESGIPLHSSVVNLFMQQILDGHWDE 112

Query: 70  CIGFLNSMRDIMGEAVESALFLVLRQCLMEYIKHGEVTLALDVLRKRVSALHLDRYKVHS 129
            I  LN +       V++A FL+L Q   E +   +V  AL  LR  ++ L  D  ++  
Sbjct: 113 SIVTLNKIGLADENVVQAASFLILEQKFFELLDGEKVMDALKTLRTEITPLCSDSSRIRE 172

Query: 130 LANSMLS 136
           L++ MLS
Sbjct: 173 LSSRMLS 179


>Glyma14g03550.2 
          Length = 572

 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 70/126 (55%)

Query: 11  IGSKALFKKHEFVRIIVQCLYSLGYSKSASCLEVESGVLFKSKEFQLLESHVLNGNWDGC 70
           +GSK + KK EFVRII + LYSLGY KS + LE ESG+   S    L    +L+GNWD  
Sbjct: 53  VGSKGVIKKEEFVRIIAKALYSLGYGKSGAHLEEESGIPLHSPGVNLFMQQILDGNWDDS 112

Query: 71  IGFLNSMRDIMGEAVESALFLVLRQCLMEYIKHGEVTLALDVLRKRVSALHLDRYKVHSL 130
           +  L  +       V SA FL+L Q   E +   +V  AL  LR  ++ L ++  ++  L
Sbjct: 113 VATLYKIGLADESMVRSASFLILEQKFFELLNGEKVMEALKTLRTEIAPLCINSSRIREL 172

Query: 131 ANSMLS 136
           ++ ++S
Sbjct: 173 SSCLVS 178


>Glyma14g03550.1 
          Length = 572

 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 70/126 (55%)

Query: 11  IGSKALFKKHEFVRIIVQCLYSLGYSKSASCLEVESGVLFKSKEFQLLESHVLNGNWDGC 70
           +GSK + KK EFVRII + LYSLGY KS + LE ESG+   S    L    +L+GNWD  
Sbjct: 53  VGSKGVIKKEEFVRIIAKALYSLGYGKSGAHLEEESGIPLHSPGVNLFMQQILDGNWDDS 112

Query: 71  IGFLNSMRDIMGEAVESALFLVLRQCLMEYIKHGEVTLALDVLRKRVSALHLDRYKVHSL 130
           +  L  +       V SA FL+L Q   E +   +V  AL  LR  ++ L ++  ++  L
Sbjct: 113 VATLYKIGLADESMVRSASFLILEQKFFELLNGEKVMEALKTLRTEIAPLCINSSRIREL 172

Query: 131 ANSMLS 136
           ++ ++S
Sbjct: 173 SSCLVS 178


>Glyma03g32630.1 
          Length = 432

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 1/48 (2%)

Query: 98  MEYIKHGEVTLALDVLRKRVSALHLDRYKVHSLANSMLSL-KDTEIGG 144
           MEY+  GE  LAL VLRK+VSAL +D+ KVHSLA  +LS  KD E+G 
Sbjct: 1   MEYLNCGEDALALGVLRKQVSALDVDKCKVHSLAKCLLSFNKDRELGA 48