Miyakogusa Predicted Gene

Lj0g3v0257359.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0257359.2 Non Chatacterized Hit- tr|H0X9P8|H0X9P8_OTOGA
Uncharacterized protein (Fragment) OS=Otolemur garnett,30.27,1e-17,RNA
recognition motif,RNA recognition motif domain; RNA-binding domain,
RBD,NULL; SUBFAMILY NOT NAME,CUFF.16913.2
         (265 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g33090.1                                                       441   e-124
Glyma16g22290.1                                                       434   e-122
Glyma08g45060.1                                                       212   4e-55
Glyma18g07860.1                                                       208   4e-54

>Glyma09g33090.1 
          Length = 264

 Score =  441 bits (1134), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/266 (84%), Positives = 233/266 (87%), Gaps = 3/266 (1%)

Query: 1   MFGSRGAMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGPGSFXXXXXXXXXXXXXXXXX 60
           M+G RGAMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSG G+                  
Sbjct: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGTGNLPYGYAGGFQPPPFPVVR 60

Query: 61  XXXXXXXFNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFPGAMQVEFALQRDRQN 120
                  FNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVF GAMQVEFALQRDRQN
Sbjct: 61  LRGLP--FNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQN 118

Query: 121 MGRRYVEVFRCKKQDYYNAVAGEVSYEGIYDNDYHGS-PPPSRSKRFSDKEQMEYTEILK 179
           MGRRYVEVFRCKKQDYYNAVAGE++YEGIYDNDYHGS PPPSR KRF+DK+QMEYTEILK
Sbjct: 119 MGRRYVEVFRCKKQDYYNAVAGEINYEGIYDNDYHGSSPPPSRLKRFNDKDQMEYTEILK 178

Query: 180 MRGLPFAVTKSQIVDFFKDYKLIEDRVHIACRPDGKATGEAYVEFVSPDEAKRAMSKDKM 239
           MRGLPF VTKSQIV+FFKD+KLIEDRVHIACRPDGKATGEAYVEFVS +EAKRAMSKDKM
Sbjct: 179 MRGLPFQVTKSQIVEFFKDFKLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAMSKDKM 238

Query: 240 MIGSRYVELFPSTPDEARRAESRSRQ 265
            IGSRYVELFPSTPDEARRAESRSRQ
Sbjct: 239 TIGSRYVELFPSTPDEARRAESRSRQ 264


>Glyma16g22290.1 
          Length = 264

 Score =  434 bits (1115), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 221/266 (83%), Positives = 230/266 (86%), Gaps = 3/266 (1%)

Query: 1   MFGSRGAMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGPGSFXXXXXXXXXXXXXXXXX 60
           M+G RGAMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSG G+                  
Sbjct: 1   MYGPRGAMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGTGNLPYGYAGGFQPPPFPVVR 60

Query: 61  XXXXXXXFNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFPGAMQVEFALQRDRQN 120
                  FNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVF GAMQVEFALQRDRQN
Sbjct: 61  LRGLP--FNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQN 118

Query: 121 MGRRYVEVFRCKKQDYYNAVAGEVSYEGIYDNDYHGS-PPPSRSKRFSDKEQMEYTEILK 179
           MGRRYVEVFRCKKQDYYNAVA E+ YEGIYDNDY GS PPPSRSKRF+DK+QME TEILK
Sbjct: 119 MGRRYVEVFRCKKQDYYNAVAAEIKYEGIYDNDYQGSSPPPSRSKRFNDKDQMECTEILK 178

Query: 180 MRGLPFAVTKSQIVDFFKDYKLIEDRVHIACRPDGKATGEAYVEFVSPDEAKRAMSKDKM 239
           MRGLPF VTKSQIV+FFKD+KLIEDRVHIACRPDGK+TGEAYVEFVS +EAKRAMSKDKM
Sbjct: 179 MRGLPFQVTKSQIVEFFKDFKLIEDRVHIACRPDGKSTGEAYVEFVSAEEAKRAMSKDKM 238

Query: 240 MIGSRYVELFPSTPDEARRAESRSRQ 265
            IGSRYVELFPSTPDEARRAESRSRQ
Sbjct: 239 TIGSRYVELFPSTPDEARRAESRSRQ 264


>Glyma08g45060.1 
          Length = 260

 Score =  212 bits (539), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 105/201 (52%), Positives = 142/201 (70%), Gaps = 11/201 (5%)

Query: 68  FNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFPGAMQVEFALQRDRQNMGRRYVE 127
           F+CT+ D+ +FF GL IVDVL V+K G+F+GE F V    +QV+FALQR+RQNMGRRYVE
Sbjct: 67  FDCTETDVAEFFHGLDIVDVLFVHKGGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVE 126

Query: 128 VFRCKKQDYYNAVAGEVSYEGIYDNDYHGSPP---PSRSKRFSD-KEQMEYTEILKMRGL 183
           VFR K+Q+YY A+A EVS       D  G  P    SR+K + + K+  E+T +L++RGL
Sbjct: 127 VFRSKRQEYYKAIANEVS-------DARGGSPRRSASRAKSYDEGKDSAEHTGVLRLRGL 179

Query: 184 PFAVTKSQIVDFFKDYKLIEDRVHIACRPDGKATGEAYVEFVSPDEAKRAMSKDKMMIGS 243
           PF+ +K  I++FFKD+ L ED +HI    +G+ +GEAY EF S +++K AM KD+M +GS
Sbjct: 180 PFSASKDDIMEFFKDFGLPEDSIHIIMNSEGRPSGEAYAEFASAEDSKAAMVKDRMTLGS 239

Query: 244 RYVELFPSTPDEARRAESRSR 264
           RY+ELFPS+P E   A SR R
Sbjct: 240 RYIELFPSSPGEMEEAISRGR 260


>Glyma18g07860.1 
          Length = 261

 Score =  208 bits (530), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 105/201 (52%), Positives = 141/201 (70%), Gaps = 11/201 (5%)

Query: 68  FNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFPGAMQVEFALQRDRQNMGRRYVE 127
           F+CT+ D+ +FF GL IVDVL V+K G+F+GE F V    +QV+FALQR+RQNMGRRYVE
Sbjct: 68  FDCTETDVAEFFHGLDIVDVLFVHKGGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVE 127

Query: 128 VFRCKKQDYYNAVAGEVSYEGIYDNDYHGSPP---PSRSKRFSD-KEQMEYTEILKMRGL 183
           VFR K+Q+YY A+A EVS       D  G  P    SR+K + + KE  E+T +L++RGL
Sbjct: 128 VFRSKRQEYYKAIANEVS-------DARGGSPRRSASRAKSYDEGKESAEHTGVLRLRGL 180

Query: 184 PFAVTKSQIVDFFKDYKLIEDRVHIACRPDGKATGEAYVEFVSPDEAKRAMSKDKMMIGS 243
           PF+ +K  I++FFKD+ L ED +HI    +G+ +GEAY EF S +++K AM KD+M +GS
Sbjct: 181 PFSASKDDIMEFFKDFGLPEDSIHIIMNSEGRPSGEAYAEFESAEDSKAAMIKDRMTLGS 240

Query: 244 RYVELFPSTPDEARRAESRSR 264
           RY+ELFPS+  E   A SR R
Sbjct: 241 RYIELFPSSHGEMEEAISRGR 261