Miyakogusa Predicted Gene

Lj0g3v0257189.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0257189.1 Non Chatacterized Hit- tr|Q9ARL7|Q9ARL7_HORVD
Putative serine/threonine kinase OS=Hordeum vulgare va,75.41,3e-19,
,CUFF.16901.1
         (78 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g07670.1                                                       118   1e-27
Glyma02g13220.1                                                       116   4e-27

>Glyma01g07670.1 
          Length = 377

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/61 (91%), Positives = 57/61 (93%)

Query: 18  NEIQLPPSIYQRLTSSSTLMNLAQELAYHKMCYEDMPLQELQATQEQRTIQNLLDTLRTI 77
           NE+  PPSIYQRLTSSSTLMNLAQ LAYHKMCYEDMPLQELQATQEQRTIQNL DTLRTI
Sbjct: 315 NEMPFPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTI 374

Query: 78  L 78
           L
Sbjct: 375 L 375


>Glyma02g13220.1 
          Length = 809

 Score =  116 bits (291), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/61 (93%), Positives = 58/61 (95%)

Query: 18  NEIQLPPSIYQRLTSSSTLMNLAQELAYHKMCYEDMPLQELQATQEQRTIQNLLDTLRTI 77
           NE+ LPPSIYQRLTSSSTLMNLAQ LAYHKMCYEDMPLQELQATQEQRTIQNL DTLRTI
Sbjct: 747 NEMPLPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTI 806

Query: 78  L 78
           L
Sbjct: 807 L 807