Miyakogusa Predicted Gene

Lj0g3v0256909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0256909.1 Non Chatacterized Hit- tr|I1LS21|I1LS21_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,76.13,0,LUMAZINE_BIND,Lumazine-binding domain; seg,NULL; no
description,ATPase, F1/A1 complex, alpha subunit,CUFF.16891.1
         (276 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g12710.1                                                       371   e-103
Glyma06g45820.1                                                       134   1e-31

>Glyma12g12710.1 
          Length = 275

 Score =  371 bits (952), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/243 (76%), Positives = 206/243 (84%), Gaps = 2/243 (0%)

Query: 31  LRFNPIAKPSPLRFFLPLTPQNPHHHRRRSAVVTNMFTGLVEELGTVKQLGMASHGGFDL 90
           L+ NPI++PSPLR FLPLT + P   RR  +    +FTG+VEE+GTVKQLG++ HGG DL
Sbjct: 34  LKLNPISRPSPLRAFLPLTSRAPT--RRCPSTPACLFTGIVEEMGTVKQLGISPHGGVDL 91

Query: 91  NVEAKTVLEGVILGDSIAVNGTCLTVTEFDLEGSNFTVGLSPETLRKTSLEELEPGSVVN 150
            + A TVL+GV LGDSIAVNGTCLTVTEFD + ++FTVGLSPETLRKTSL ELEPGS VN
Sbjct: 92  KIAASTVLDGVNLGDSIAVNGTCLTVTEFDTKVADFTVGLSPETLRKTSLSELEPGSAVN 151

Query: 151 LERALLPTTRMGGHFVQGHVDGTGVIVSMDAEGDSLWVKVKAEKEVLKYIVPKGFIAVDG 210
           LERA+ P +RMGGHFVQGHVDGTG IVS   EGDSLWVKVKA+K +LKYIVPKGFIAVDG
Sbjct: 152 LERAVTPASRMGGHFVQGHVDGTGEIVSKVPEGDSLWVKVKADKGLLKYIVPKGFIAVDG 211

Query: 211 TSLTVVDVFDDEGCFNFMLVAYTQQKVVIPLKKVGRKVNLEVDILGKYVERLLSSGFVQS 270
           TSLTVVDVFD E CFNFMLVAYTQQKVVIPLK VG KVNLEVDILGKYVERLL+SGF  S
Sbjct: 212 TSLTVVDVFDHEECFNFMLVAYTQQKVVIPLKNVGEKVNLEVDILGKYVERLLASGFASS 271

Query: 271 IAN 273
            A+
Sbjct: 272 FAD 274


>Glyma06g45820.1 
          Length = 176

 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/142 (51%), Positives = 93/142 (65%), Gaps = 16/142 (11%)

Query: 17  PNIAANRHHST--FTNLRFNPIAKPSPLRFFLPLTPQNPHHHRRRSAVVTNMFTGLVEEL 74
           P I A   H+T   T+L+FNP      LR FLP T         R +   ++F G+VEE+
Sbjct: 8   PRIIATITHNTSHLTSLKFNP------LRAFLPFT--------SRPSTPVSLFIGIVEEM 53

Query: 75  GTVKQLGMASHGGFDLNVEAKTVLEGVILGDSIAVNGTCLTVTEFDLEGSNFTVGLSPET 134
           GT+K LG + HG FDL + A T L GV LGD+I VN TCLTVTEFD++  +F VG+ PET
Sbjct: 54  GTIKHLGTSPHGSFDLKITASTALHGVNLGDNIVVNDTCLTVTEFDVKVFDFMVGMLPET 113

Query: 135 LRKTSLEELEPGSVVNLERALL 156
           LRKTSL +LEP + VNLERA++
Sbjct: 114 LRKTSLSKLEPDTTVNLERAII 135