Miyakogusa Predicted Gene

Lj0g3v0256709.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0256709.2 Non Chatacterized Hit- tr|J3MA83|J3MA83_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB05G3,80.95,0.000000000003,seg,NULL,CUFF.16869.2
         (142 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g05510.1                                                        85   2e-17
Glyma15g16830.1                                                        85   2e-17

>Glyma09g05510.1 
          Length = 482

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 60/101 (59%)

Query: 17  EVIMEIPLELMLTISKKLPWMXXXXXXXXXXXXXXXXNPANPETDXXXXXXXXXXYAFDC 76
            V+MEIPLELMLTISKKLPWM                N  NPETD          YAFDC
Sbjct: 115 RVVMEIPLELMLTISKKLPWMFFPDIIPLDHPIFDIINSTNPETDWDLRLACLLLYAFDC 174

Query: 77  QENFWQLYGDFLLSADESTSLFIATEVLLQQSQGCDFSPSL 117
           + NFWQLYGDFL SADE TSL +A+E  L + Q  D + ++
Sbjct: 175 EGNFWQLYGDFLPSADECTSLLLASEEELLELQDSDLASTI 215


>Glyma15g16830.1 
          Length = 483

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 47/79 (59%)

Query: 17  EVIMEIPLELMLTISKKLPWMXXXXXXXXXXXXXXXXNPANPETDXXXXXXXXXXYAFDC 76
            VIMEIPLELMLTISKKLPWM                N  NPETD          YAFDC
Sbjct: 116 RVIMEIPLELMLTISKKLPWMFFPDIIPLDHPIFDIINSTNPETDWDLRLACLLLYAFDC 175

Query: 77  QENFWQLYGDFLLSADEST 95
           + NFWQLYGDFL SADE T
Sbjct: 176 EGNFWQLYGDFLPSADECT 194