Miyakogusa Predicted Gene

Lj0g3v0256499.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0256499.1 Non Chatacterized Hit- tr|C6TKX5|C6TKX5_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,61.46,1e-17,seg,NULL,CUFF.16851.1
         (93 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g34960.1                                                       106   5e-24

>Glyma10g34960.1 
          Length = 94

 Score =  106 bits (265), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 52/94 (55%), Positives = 64/94 (68%), Gaps = 1/94 (1%)

Query: 1  MATSHYSKSMHPSCKXXXXXXXXXXXXXXGSCSATRTGATMRLNQSTQILRPKNK-PGFP 59
          MA SHYSK++H  CK              GSC+A RTGATMRLN+ +++LR K + P FP
Sbjct: 1  MANSHYSKTLHLPCKSFSMAILLVYLLLVGSCTAIRTGATMRLNEGSELLRRKQQQPRFP 60

Query: 60 YKGMVFNFFPKGSIVSPSGPSRRHNKVVDATPPN 93
          YKG+VFNF PKG  + PSGPS+RHN VV +TP N
Sbjct: 61 YKGLVFNFLPKGVPIPPSGPSKRHNSVVASTPKN 94