Miyakogusa Predicted Gene

Lj0g3v0255239.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0255239.2 Non Chatacterized Hit- tr|I1LV41|I1LV41_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.26,0,no
description,Exonuclease; Ribonuclease H-like,Ribonuclease H-like
domain; EXONUCLEASE,NULL; no des,CUFF.16764.2
         (265 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g35630.1                                                       405   e-113
Glyma13g34800.1                                                       397   e-111
Glyma12g35630.2                                                       305   2e-83
Glyma15g02690.1                                                       105   4e-23
Glyma13g42740.1                                                       102   6e-22
Glyma19g11090.1                                                        91   1e-18
Glyma13g09210.1                                                        74   1e-13
Glyma17g18400.1                                                        74   2e-13
Glyma10g08050.1                                                        63   4e-10
Glyma01g30490.1                                                        53   4e-07

>Glyma12g35630.1 
          Length = 265

 Score =  405 bits (1041), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/267 (75%), Positives = 216/267 (80%), Gaps = 6/267 (2%)

Query: 1   MKKPKQTQFSPNWAXXXXXXXXXXXGSKT----KNSEEDTLKSILGKRKERPDDESNDSQ 56
           MKKPKQT  SPNW            GSK     K S+EDT +SILGKRKERPDDESND Q
Sbjct: 1   MKKPKQTLLSPNWVQLQQKLKLN--GSKASRTFKTSDEDTPESILGKRKERPDDESNDCQ 58

Query: 57  INPLIPVNDDASLTDAVAMDCEMVGVGSGNKSALGRVTLVNKWGNVIYDEFVKPIERVVD 116
           INPL+PVNDD+SLTDAVAMDCEMVGVG GNKSALGRVTLVNKWGNVIYDEFV+PIERVVD
Sbjct: 59  INPLVPVNDDSSLTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVD 118

Query: 117 FRTKISGLRPRDLRKGKDFWTVQKKVAELIKGRILVGHALSNDFKALLLSHPKKDIRDTS 176
           FRTKISG+RPRDLRK KDFW  QKKVAELI GRILVGHALSND KALLLSHP+KDIRDTS
Sbjct: 119 FRTKISGIRPRDLRKAKDFWAAQKKVAELINGRILVGHALSNDLKALLLSHPRKDIRDTS 178

Query: 177 EYQPFLNSNSRIALRHLAAERLGVKIQTGEHCPIQDARAAMLLYQRNRKEWEKSIKDQSR 236
           EYQPFL S+SR ALRHLAA+ LGV IQTGEHCPI+DARAAMLLYQRN+KEWEKSIKDQ R
Sbjct: 179 EYQPFLKSSSRRALRHLAAKHLGVNIQTGEHCPIEDARAAMLLYQRNKKEWEKSIKDQFR 238

Query: 237 IXXXXXXXXXXXXXXNENASDSNHSGI 263
           +              NE+ S+ NH  I
Sbjct: 239 LKQKQRKSKQKKKLKNEHTSNGNHVEI 265


>Glyma13g34800.1 
          Length = 266

 Score =  397 bits (1021), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/268 (74%), Positives = 216/268 (80%), Gaps = 7/268 (2%)

Query: 1   MKKPKQTQFSPNWAXXXXXXXXXXXGSKT----KNSEEDTLKSILGKRKERPDDESNDSQ 56
           MKKPK T  SPNW            GSK     KNS+EDT +SILGKRKERPDDE ND Q
Sbjct: 1   MKKPKPTLLSPNWVQLQEKLKPN--GSKASRTFKNSDEDTPESILGKRKERPDDEPNDCQ 58

Query: 57  INPLIPVNDDASLTDAVAMDCEMVGVGSGNKSALGRVTLVNKWGNVIYDEFVKPIERVVD 116
           INPL P+NDD+SLTDAVAMDCEMVGVG GNKSALGRVTLVNKWGNVIYDEFV+PIERVVD
Sbjct: 59  INPLAPINDDSSLTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVD 118

Query: 117 FRTKISGLRPRDLRKGKDFWTVQKKVAELIKGRILVGHALSNDFKALLLSHPKKDIRDTS 176
           FRTKISG+RPRDLRK KDFW  QKKVAELI GRILVGHALSND KALLLSHP+KDIRDTS
Sbjct: 119 FRTKISGIRPRDLRKAKDFWAAQKKVAELINGRILVGHALSNDLKALLLSHPRKDIRDTS 178

Query: 177 EYQPFLN-SNSRIALRHLAAERLGVKIQTGEHCPIQDARAAMLLYQRNRKEWEKSIKDQS 235
           EY+PFLN S+SR ALRHLAAE LGV IQTGEHCP++DARAAMLLYQRNRKEWEK+IKDQ 
Sbjct: 179 EYRPFLNRSSSRRALRHLAAEHLGVNIQTGEHCPVEDARAAMLLYQRNRKEWEKNIKDQF 238

Query: 236 RIXXXXXXXXXXXXXXNENASDSNHSGI 263
           R+              NE+ S++NH  I
Sbjct: 239 RLKQKQRKSKQKKKQKNEDVSNANHVEI 266


>Glyma12g35630.2 
          Length = 221

 Score =  305 bits (782), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 151/186 (81%), Positives = 158/186 (84%), Gaps = 6/186 (3%)

Query: 1   MKKPKQTQFSPNWAXXXXXXXXXXXGSKT----KNSEEDTLKSILGKRKERPDDESNDSQ 56
           MKKPKQT  SPNW            GSK     K S+EDT +SILGKRKERPDDESND Q
Sbjct: 1   MKKPKQTLLSPNWVQLQQKLKLN--GSKASRTFKTSDEDTPESILGKRKERPDDESNDCQ 58

Query: 57  INPLIPVNDDASLTDAVAMDCEMVGVGSGNKSALGRVTLVNKWGNVIYDEFVKPIERVVD 116
           INPL+PVNDD+SLTDAVAMDCEMVGVG GNKSALGRVTLVNKWGNVIYDEFV+PIERVVD
Sbjct: 59  INPLVPVNDDSSLTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVD 118

Query: 117 FRTKISGLRPRDLRKGKDFWTVQKKVAELIKGRILVGHALSNDFKALLLSHPKKDIRDTS 176
           FRTKISG+RPRDLRK KDFW  QKKVAELI GRILVGHALSND KALLLSHP+KDIRDTS
Sbjct: 119 FRTKISGIRPRDLRKAKDFWAAQKKVAELINGRILVGHALSNDLKALLLSHPRKDIRDTS 178

Query: 177 EYQPFL 182
           EYQPFL
Sbjct: 179 EYQPFL 184


>Glyma15g02690.1 
          Length = 366

 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 96/171 (56%), Gaps = 16/171 (9%)

Query: 72  AVAMDCEMVGVGS-GNKSALGRVTLVNKWGNVIYDEFVKPIERVVDFRTKISGLRPRDLR 130
           AVAMDCEMVG GS G+     RV LV++   +I+  +V+P   V ++R  I+GL    LR
Sbjct: 139 AVAMDCEMVGGGSDGSLELCARVCLVDEDERLIFHTYVQPEIPVTNYRYDITGLTEEHLR 198

Query: 131 KGKDFWTVQKKVAELI--------------KGRILVGHALSNDFKALLLSHPKKDIRDTS 176
                  V++K+ +++              K R+LVGH L++D   L +++P   +RDT+
Sbjct: 199 NAMPLKEVREKLLQILHNGESIGKVRLDGGKARLLVGHDLAHDLDCLKMNYPDHMLRDTA 258

Query: 177 EYQPFLNSN-SRIALRHLAAERLGVKIQTGEHCPIQDARAAMLLYQRNRKE 226
           +Y+P + +N    +L++L    LG  IQ+G H P +D  + M LY+R R +
Sbjct: 259 KYRPLMKTNLVSHSLKYLTRTYLGYDIQSGTHDPYEDCISVMRLYKRIRSQ 309


>Glyma13g42740.1 
          Length = 366

 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 96/171 (56%), Gaps = 16/171 (9%)

Query: 72  AVAMDCEMVGVGS-GNKSALGRVTLVNKWGNVIYDEFVKPIERVVDFRTKISGLRPRDLR 130
           AVA+DCEMVG GS G+     RV LV++   +I+  +V+P   V ++R  I+GL    L+
Sbjct: 139 AVAIDCEMVGGGSDGSLELCARVCLVDEDERLIFHTYVQPEIPVTNYRYDITGLTEEHLK 198

Query: 131 KGKDFWTVQKKVAELI--------------KGRILVGHALSNDFKALLLSHPKKDIRDTS 176
                  V++K+ +++              K R+LVGH L++D   L +++P   +RDT+
Sbjct: 199 NAIPLKKVREKLLQILQNGESIGKVRLDGGKARLLVGHDLAHDLDCLKMNYPDHMLRDTA 258

Query: 177 EYQPFLNSN-SRIALRHLAAERLGVKIQTGEHCPIQDARAAMLLYQRNRKE 226
           +Y+P + +N    +L++L    LG  IQ+G H P +D  + M LY+R R +
Sbjct: 259 KYRPLMKTNLVSHSLKYLTRTYLGYDIQSGTHDPYEDCISVMRLYKRIRSQ 309


>Glyma19g11090.1 
          Length = 346

 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 22/184 (11%)

Query: 61  IPVNDDASLTDAVAMDCEMVGVGS-GNKSALGRVTLVNKWGNVIYDEFVKPIERVVDFRT 119
           + +   A     VA+ C+MVG GS G+     RV L+++  N+I+  +VKP   V ++R 
Sbjct: 121 LAIGGGARGPQVVALACKMVGGGSDGSLDLCARVCLIDEHENIIFHSYVKPPIPVANYRY 180

Query: 120 KISGLRPRDLRKGKDFWTVQKKVAELI--------------KGRILVGHALSNDFKALLL 165
           + +G+ P  LR       VQ+++ + +              + RILVGH L +D ++L +
Sbjct: 181 ETTGITPEYLRDAMPMRHVQRRIHDFLCNGEPMWTIRARGGRARILVGHGLDHDLESLQI 240

Query: 166 SHPKKDIRDTSEYQPFLNSNSRIALRHLAAERLGVKIQTGEHCPIQDARAAMLLYQRNRK 225
            +  + IRDT++Y P + ++         +  L   IQTG   P +D  A M LY R R 
Sbjct: 241 EYRAEKIRDTAKYPPLMKTSK-------LSNSLKYDIQTGIQDPYEDCIATMRLYMRMRS 293

Query: 226 EWEK 229
           +  +
Sbjct: 294 QAHR 297


>Glyma13g09210.1 
          Length = 611

 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 88/171 (51%), Gaps = 12/171 (7%)

Query: 61  IPVNDDASLTDAVAMDCEMVGVGSGNKSALGRVTLVNKWGNVIYDEFVKPIERVVDFRTK 120
           +P    +   + +A+DCEM     G +  L R+TLV+  G V+ D+ VKP   + D+ T+
Sbjct: 217 LPAPSGSPFYEMLALDCEMCITSEGFE--LTRITLVDVKGQVLIDKLVKPSNAITDYNTR 274

Query: 121 ISGLRPRDLRK-GKDFWTVQKKVAELI-KGRILVGHALSNDFKALLLSHPKKDIRDTSE- 177
            SG+    L         +Q++  +L+ K  ILVGH+L ND  AL +SH    + DT+  
Sbjct: 275 FSGITSEMLDGVTTSLRDIQEEFIKLVYKETILVGHSLENDLLALNISH--DSVIDTAVL 332

Query: 178 YQPFLNSNSRIALRHLAAERLGVKIQTG--EHCPIQDARAAM---LLYQRN 223
           Y+    S+ + ALR L    L  +IQ     H  I+DARA M   LL  RN
Sbjct: 333 YKHPRGSSHKNALRFLTKRFLSREIQQSGNGHDSIEDARATMELALLKIRN 383


>Glyma17g18400.1 
          Length = 509

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 21/160 (13%)

Query: 70  TDAVAMDCEMVGVGSGNKSALGRVTLVNKWGNVIYDEFVKPIERVVDFRTKISGLRPRDL 129
           T+ VA+DCEMV    G + A+ +V +V+    V  D+ VKP + + D+RT+I+G+  +DL
Sbjct: 140 TEMVAVDCEMVLCEDGTE-AVVKVCVVDHNLEVKLDKLVKPDKEIADYRTEITGVSSQDL 198

Query: 130 RKGK-DFWTVQKKVAELI-KGRILVGHALSNDFKALLLSHPKKDIRDTS----------E 177
                    +QK + +L+  G ILVGH+L ND + L L H +  + DTS           
Sbjct: 199 EAVTCSLADIQKYMKKLLSSGIILVGHSLHNDLRVLKLDHVR--VIDTSYIFQSLDGSIH 256

Query: 178 YQPFLNSNSRIALRHLAAERLGVKIQTGEHCPIQDARAAM 217
            +P LNS  +  L H   E+         H  + DA+AAM
Sbjct: 257 KRPSLNSLCQAVLHHEVREK------GAPHNCLDDAKAAM 290


>Glyma10g08050.1 
          Length = 302

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 12/157 (7%)

Query: 70  TDAVAMDCEMVGVGSGNKSALGRVTLVNKWGNVIYDEFVKPIERVVDFRTKISGLRPRDL 129
           T+ V +DCEMV +      A+ +V +V+   ++  +E VKP + + D+RTKI+G+  +DL
Sbjct: 57  TEMVVVDCEMV-LCEDETEAVVKVCVVDHNFSLCLEELVKPNKEIADYRTKITGVSSQDL 115

Query: 130 RK-GKDFWTVQKKVAELI-KGRILVGHALSNDFKALLLSHPKKDIRDTSEYQPFLNS-NS 186
                    +QK + +L+  G ILVGH+L ND   L L H K  I  +  +Q    S + 
Sbjct: 116 EAVTCSMADIQKYMNKLLSSGIILVGHSLPNDL-LLKLDHVKV-INTSYIFQSLDGSIHK 173

Query: 187 RIALRHLAA------ERLGVKIQTGEHCPIQDARAAM 217
           R +L  L        E   ++ +   +C + DA+AAM
Sbjct: 174 RPSLNSLCQATTPLEESCCLECKFISNCCLDDAKAAM 210


>Glyma01g30490.1 
          Length = 195

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/31 (74%), Positives = 23/31 (74%)

Query: 132 GKDFWTVQKKVAELIKGRILVGHALSNDFKA 162
            KDFW  QKKV ELI GRILVGH LSND K 
Sbjct: 119 SKDFWAAQKKVTELINGRILVGHTLSNDLKV 149