Miyakogusa Predicted Gene

Lj0g3v0254419.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0254419.1 tr|Q5JMD6|Q5JMD6_ORYSJ Os01g0971900 protein
OS=Oryza sativa subsp. japonica GN=P0518C01.18 PE=4
SV=1,55.88,4e-19,seg,NULL; PUMILIO 1, 2,NULL; RNA BINDING PROTEIN
PUMILIO-RELATED,NULL,CUFF.16729.1
         (172 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g04060.1                                                       228   2e-60
Glyma15g04060.2                                                       228   3e-60
Glyma15g04060.3                                                       227   5e-60
Glyma12g06430.1                                                       221   3e-58
Glyma11g14550.2                                                       216   1e-56
Glyma11g14550.1                                                       216   1e-56
Glyma11g14530.1                                                       215   2e-56
Glyma12g06450.2                                                       213   7e-56
Glyma12g06450.1                                                       213   7e-56
Glyma12g06450.3                                                       213   1e-55
Glyma11g14500.1                                                       204   3e-53
Glyma20g32230.1                                                        96   2e-20
Glyma10g35290.1                                                        94   6e-20

>Glyma15g04060.1 
          Length = 997

 Score =  228 bits (582), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/179 (69%), Positives = 131/179 (73%), Gaps = 7/179 (3%)

Query: 1   MLSELGRRPVLGGNEGSFGDELDKEIGMLLREQRRQDVDDHERELNRYRSGSAPPTVEGS 60
           MLSELG RP+LGGNEGSFGDEL+KEIGMLLREQRRQ+VDD ERELN YRSGSAPPTVEGS
Sbjct: 1   MLSELGTRPMLGGNEGSFGDELEKEIGMLLREQRRQEVDDRERELNLYRSGSAPPTVEGS 60

Query: 61  LNAVXXXXXXXXXXXXXXP---FSEFPGANHENDFASEEELRSDPAYLQYYYSNVXXXXX 117
           L+AV                  FSEF GA   N F+SEEELRSDPAYL YYYSNV     
Sbjct: 61  LSAVGGLFGGGGGGAGTAAGAVFSEFSGAKSGNGFSSEEELRSDPAYLSYYYSNVNLNPR 120

Query: 118 XXXXXXSKEDWRSAQR----ASVLGGIGDRRKVNRVDDSGARSLFATPPGFNSRKSESE 172
                 SKEDWR  QR    ASVLGGIGDRRKVNR DD+G RSLFATPPGFN RK ESE
Sbjct: 121 LPPPLLSKEDWRFTQRLKGGASVLGGIGDRRKVNRADDNGGRSLFATPPGFNMRKQESE 179


>Glyma15g04060.2 
          Length = 966

 Score =  228 bits (581), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 125/179 (69%), Positives = 131/179 (73%), Gaps = 7/179 (3%)

Query: 1   MLSELGRRPVLGGNEGSFGDELDKEIGMLLREQRRQDVDDHERELNRYRSGSAPPTVEGS 60
           MLSELG RP+LGGNEGSFGDEL+KEIGMLLREQRRQ+VDD ERELN YRSGSAPPTVEGS
Sbjct: 1   MLSELGTRPMLGGNEGSFGDELEKEIGMLLREQRRQEVDDRERELNLYRSGSAPPTVEGS 60

Query: 61  LNAVXXXXXXXXXXXXXXP---FSEFPGANHENDFASEEELRSDPAYLQYYYSNVXXXXX 117
           L+AV                  FSEF GA   N F+SEEELRSDPAYL YYYSNV     
Sbjct: 61  LSAVGGLFGGGGGGAGTAAGAVFSEFSGAKSGNGFSSEEELRSDPAYLSYYYSNVNLNPR 120

Query: 118 XXXXXXSKEDWRSAQR----ASVLGGIGDRRKVNRVDDSGARSLFATPPGFNSRKSESE 172
                 SKEDWR  QR    ASVLGGIGDRRKVNR DD+G RSLFATPPGFN RK ESE
Sbjct: 121 LPPPLLSKEDWRFTQRLKGGASVLGGIGDRRKVNRADDNGGRSLFATPPGFNMRKQESE 179


>Glyma15g04060.3 
          Length = 835

 Score =  227 bits (579), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 125/179 (69%), Positives = 131/179 (73%), Gaps = 7/179 (3%)

Query: 1   MLSELGRRPVLGGNEGSFGDELDKEIGMLLREQRRQDVDDHERELNRYRSGSAPPTVEGS 60
           MLSELG RP+LGGNEGSFGDEL+KEIGMLLREQRRQ+VDD ERELN YRSGSAPPTVEGS
Sbjct: 1   MLSELGTRPMLGGNEGSFGDELEKEIGMLLREQRRQEVDDRERELNLYRSGSAPPTVEGS 60

Query: 61  LNAVXXXXXXXXXXXXXXP---FSEFPGANHENDFASEEELRSDPAYLQYYYSNVXXXXX 117
           L+AV                  FSEF GA   N F+SEEELRSDPAYL YYYSNV     
Sbjct: 61  LSAVGGLFGGGGGGAGTAAGAVFSEFSGAKSGNGFSSEEELRSDPAYLSYYYSNVNLNPR 120

Query: 118 XXXXXXSKEDWRSAQR----ASVLGGIGDRRKVNRVDDSGARSLFATPPGFNSRKSESE 172
                 SKEDWR  QR    ASVLGGIGDRRKVNR DD+G RSLFATPPGFN RK ESE
Sbjct: 121 LPPPLLSKEDWRFTQRLKGGASVLGGIGDRRKVNRADDNGGRSLFATPPGFNMRKQESE 179


>Glyma12g06430.1 
          Length = 1033

 Score =  221 bits (562), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 119/176 (67%), Positives = 126/176 (71%), Gaps = 4/176 (2%)

Query: 1   MLSELGRRPVLGGNEGSFGDELDKEIGMLLREQRRQDVDDHERELNRYRSGSAPPTVEGS 60
           MLSELGRRP+LG NEGSFGDEL+KEIGMLLREQRRQ+ DD ERELN +RSGSAPPTV+GS
Sbjct: 1   MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVDGS 60

Query: 61  LNAVXXXXXXXXXXXXXXPFSEFPGANHENDFASEEELRSDPAYLQYYYSNVXXXXXXXX 120
           L+AV               FSEF G    N  ASEEELRSDPAYL YYYSNV        
Sbjct: 61  LSAVGGLFAGGGGGGAPAAFSEFRGTKDVNGIASEEELRSDPAYLSYYYSNVNLNPRLPP 120

Query: 121 XXXSKEDWRSAQR----ASVLGGIGDRRKVNRVDDSGARSLFATPPGFNSRKSESE 172
              SKEDWR  QR    AS LGGIGDRRKVNR DD+  RSLFATPPGFN RK ESE
Sbjct: 121 PLLSKEDWRFQQRLKGGASALGGIGDRRKVNRTDDNAGRSLFATPPGFNMRKQESE 176


>Glyma11g14550.2 
          Length = 1024

 Score =  216 bits (549), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 119/179 (66%), Positives = 124/179 (69%), Gaps = 7/179 (3%)

Query: 1   MLSELGRRPVLGGNEGSFGDELDKEIGMLLREQRRQDVDDHERELNRYRSGSAPPTVEGS 60
           MLSELGRRP+LG NEGSFGDEL+KEIGMLLREQRRQ+ DD ERELN YRSGSAPPTVEGS
Sbjct: 1   MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIYRSGSAPPTVEGS 60

Query: 61  LNAVXXXXXXXXXXXXX---XPFSEFPGANHENDFASEEELRSDPAYLQYYYSNVXXXXX 117
           L+AV                  FSEF G    N   SEEELRSDPAYL YYYSNV     
Sbjct: 61  LSAVGGLFGGAAGAPATGAPVAFSEFQGTKDVNGITSEEELRSDPAYLSYYYSNVNLNPR 120

Query: 118 XXXXXXSKEDWRSAQR----ASVLGGIGDRRKVNRVDDSGARSLFATPPGFNSRKSESE 172
                 SKEDWR  QR    AS LGGIGDRRKVNR DD+G R LF TPPGFN RK ESE
Sbjct: 121 LPPPLLSKEDWRFQQRLKGGASALGGIGDRRKVNRTDDNGGRLLFPTPPGFNMRKQESE 179


>Glyma11g14550.1 
          Length = 1024

 Score =  216 bits (549), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 119/179 (66%), Positives = 124/179 (69%), Gaps = 7/179 (3%)

Query: 1   MLSELGRRPVLGGNEGSFGDELDKEIGMLLREQRRQDVDDHERELNRYRSGSAPPTVEGS 60
           MLSELGRRP+LG NEGSFGDEL+KEIGMLLREQRRQ+ DD ERELN YRSGSAPPTVEGS
Sbjct: 1   MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIYRSGSAPPTVEGS 60

Query: 61  LNAVXXXXXXXXXXXXX---XPFSEFPGANHENDFASEEELRSDPAYLQYYYSNVXXXXX 117
           L+AV                  FSEF G    N   SEEELRSDPAYL YYYSNV     
Sbjct: 61  LSAVGGLFGGAAGAPATGAPVAFSEFQGTKDVNGITSEEELRSDPAYLSYYYSNVNLNPR 120

Query: 118 XXXXXXSKEDWRSAQR----ASVLGGIGDRRKVNRVDDSGARSLFATPPGFNSRKSESE 172
                 SKEDWR  QR    AS LGGIGDRRKVNR DD+G R LF TPPGFN RK ESE
Sbjct: 121 LPPPLLSKEDWRFQQRLKGGASALGGIGDRRKVNRTDDNGGRLLFPTPPGFNMRKQESE 179


>Glyma11g14530.1 
          Length = 1039

 Score =  215 bits (547), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 116/179 (64%), Positives = 122/179 (68%), Gaps = 7/179 (3%)

Query: 1   MLSELGRRPVLGGNEGSFGDELDKEIGMLLREQRRQDVDDHERELNRYRSGSAPPTVEGS 60
           MLSELGRRP+LG NEGSFGDEL+KEIGMLLREQRRQD DD ERELN YRSGSAPPTVEGS
Sbjct: 1   MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQDADDRERELNIYRSGSAPPTVEGS 60

Query: 61  LN---AVXXXXXXXXXXXXXXPFSEFPGANHENDFASEEELRSDPAYLQYYYSNVXXXXX 117
           L+                    F EF G    N   SEEE+RSDPAYL YYYSNV     
Sbjct: 61  LSAVGGFFGGAAGAPATGAPVAFLEFQGTKDVNGITSEEEVRSDPAYLSYYYSNVNLNPR 120

Query: 118 XXXXXXSKEDWRSAQR----ASVLGGIGDRRKVNRVDDSGARSLFATPPGFNSRKSESE 172
                 SKEDWR  QR    AS LGGIGDRRKVNR DD+G R LF+TPPGFN RK ESE
Sbjct: 121 LPPPLLSKEDWRFQQRLKGGASALGGIGDRRKVNRTDDNGGRLLFSTPPGFNMRKQESE 179


>Glyma12g06450.2 
          Length = 1019

 Score =  213 bits (542), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 117/180 (65%), Positives = 123/180 (68%), Gaps = 8/180 (4%)

Query: 1   MLSELGRRPVLGGNEGSFGDELDKEIGMLLREQRRQDVDDHERELNRYRSGSAPPTVEGS 60
           MLSELGRRP+LG NEGSFGDEL+KEIGMLLREQRRQ+ DD ERELN +RSGSAPPTVEGS
Sbjct: 1   MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVEGS 60

Query: 61  LN----AVXXXXXXXXXXXXXXPFSEFPGANHENDFASEEELRSDPAYLQYYYSNVXXXX 116
           L+                     F EF GA   N  ASEEELRSDPAYL YYYSNV    
Sbjct: 61  LSAVGGLFAAGGGGGPATGAPAAFLEFRGAKDVNGIASEEELRSDPAYLSYYYSNVNLNP 120

Query: 117 XXXXXXXSKEDWRSAQR----ASVLGGIGDRRKVNRVDDSGARSLFATPPGFNSRKSESE 172
                  SKEDWR  QR    AS LGGIGDRRKVNR DD+  R LFATPPGFN RK ESE
Sbjct: 121 RLPPPLLSKEDWRFQQRLKGGASALGGIGDRRKVNRTDDNAGRLLFATPPGFNMRKLESE 180


>Glyma12g06450.1 
          Length = 1019

 Score =  213 bits (542), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 117/180 (65%), Positives = 123/180 (68%), Gaps = 8/180 (4%)

Query: 1   MLSELGRRPVLGGNEGSFGDELDKEIGMLLREQRRQDVDDHERELNRYRSGSAPPTVEGS 60
           MLSELGRRP+LG NEGSFGDEL+KEIGMLLREQRRQ+ DD ERELN +RSGSAPPTVEGS
Sbjct: 1   MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVEGS 60

Query: 61  LN----AVXXXXXXXXXXXXXXPFSEFPGANHENDFASEEELRSDPAYLQYYYSNVXXXX 116
           L+                     F EF GA   N  ASEEELRSDPAYL YYYSNV    
Sbjct: 61  LSAVGGLFAAGGGGGPATGAPAAFLEFRGAKDVNGIASEEELRSDPAYLSYYYSNVNLNP 120

Query: 117 XXXXXXXSKEDWRSAQR----ASVLGGIGDRRKVNRVDDSGARSLFATPPGFNSRKSESE 172
                  SKEDWR  QR    AS LGGIGDRRKVNR DD+  R LFATPPGFN RK ESE
Sbjct: 121 RLPPPLLSKEDWRFQQRLKGGASALGGIGDRRKVNRTDDNAGRLLFATPPGFNMRKLESE 180


>Glyma12g06450.3 
          Length = 950

 Score =  213 bits (541), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 117/180 (65%), Positives = 123/180 (68%), Gaps = 8/180 (4%)

Query: 1   MLSELGRRPVLGGNEGSFGDELDKEIGMLLREQRRQDVDDHERELNRYRSGSAPPTVEGS 60
           MLSELGRRP+LG NEGSFGDEL+KEIGMLLREQRRQ+ DD ERELN +RSGSAPPTVEGS
Sbjct: 1   MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVEGS 60

Query: 61  LN----AVXXXXXXXXXXXXXXPFSEFPGANHENDFASEEELRSDPAYLQYYYSNVXXXX 116
           L+                     F EF GA   N  ASEEELRSDPAYL YYYSNV    
Sbjct: 61  LSAVGGLFAAGGGGGPATGAPAAFLEFRGAKDVNGIASEEELRSDPAYLSYYYSNVNLNP 120

Query: 117 XXXXXXXSKEDWRSAQR----ASVLGGIGDRRKVNRVDDSGARSLFATPPGFNSRKSESE 172
                  SKEDWR  QR    AS LGGIGDRRKVNR DD+  R LFATPPGFN RK ESE
Sbjct: 121 RLPPPLLSKEDWRFQQRLKGGASALGGIGDRRKVNRTDDNAGRLLFATPPGFNMRKLESE 180


>Glyma11g14500.1 
          Length = 1024

 Score =  204 bits (520), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 114/176 (64%), Positives = 123/176 (69%), Gaps = 6/176 (3%)

Query: 1   MLSELGRRPVLGGNEGSFGDELDKEIGMLLREQRRQDVDDHERELNRYRSGSAPPTVEGS 60
           MLSEL RRP+LG NEGSFGDEL+KE+GMLLREQRRQ+ DD E+ELN YRSGSAPPTVEGS
Sbjct: 1   MLSELERRPMLGSNEGSFGDELEKELGMLLREQRRQEADDREQELNIYRSGSAPPTVEGS 60

Query: 61  LNAVXXXXXXXXXXXXXXPFSEFPGANHENDFASEEELRSDPAYLQYYYSNVXXXXXXXX 120
           L+AV               FS F G    N  ASEEELRSDPAYL YYYSNV        
Sbjct: 61  LSAVGGLFGGAAGAPVA--FSGFQGTKDVNLIASEEELRSDPAYLSYYYSNVNLNPRLPP 118

Query: 121 XXXSKEDWRSAQR----ASVLGGIGDRRKVNRVDDSGARSLFATPPGFNSRKSESE 172
              SKEDWR  QR    ASVLGGIGDRRKV+R DD+  RS F+TPPGFN RK E E
Sbjct: 119 PLLSKEDWRFQQRLRGGASVLGGIGDRRKVSRTDDNSGRSPFSTPPGFNMRKQEGE 174


>Glyma20g32230.1 
          Length = 962

 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 86/162 (53%), Gaps = 14/162 (8%)

Query: 16  GSFGDELDKEIGMLLREQRRQDVDDHERELNRYRSGSAPPTVEGSLNAVXXXXXXXXXXX 75
           G+  D L  E+  +L+EQR Q   + ER+ N  RSGSAPPTVEGS +A            
Sbjct: 24  GTIEDTLQSELEKILQEQRNQQFINRERDFNISRSGSAPPTVEGSFSAFGSLRNSD---- 79

Query: 76  XXXPFSEFPGANHENDFASEEELRSDPAYLQYYYSNVXXXXXXXXXXXSKEDWRSAQR-- 133
               F      ++ N   +E+++RS PAYL YYYS+            SKEDWR AQR  
Sbjct: 80  ----FGSINDRSNNNGLLTEDDIRSHPAYLSYYYSHESINPRLPPPLLSKEDWRVAQRFH 135

Query: 134 ---ASVLGGIGDRRKVNRVDDSGARSLFATPPGFNSRKSESE 172
              +S + G GD RK N   +  + SLF+  PGF+ +++E++
Sbjct: 136 GGGSSSIEGFGDWRK-NVATNGDSSSLFSMQPGFSVQQAEND 176


>Glyma10g35290.1 
          Length = 966

 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 88/166 (53%), Gaps = 21/166 (12%)

Query: 16  GSFGDELDKEIGMLLREQRRQDVDDHERELNRYRSGSAPPTVEGSLNAVXXXXXXXXXXX 75
           G+  D L  E+  +L+EQR +   + ERE N  RSGSAPPTVEGSL+A            
Sbjct: 24  GTIEDTLQSELEKILQEQRNRQFINREREYNISRSGSAPPTVEGSLSAFGSLRN------ 77

Query: 76  XXXPFSEFPGAN----HENDFASEEELRSDPAYLQYYYSNVXXXXXXXXXXXSKEDWRSA 131
                S+F   N    + N   +E+E+RS PAYL YYYS+            SKEDWR A
Sbjct: 78  -----SDFGLINDRRSNNNGLLTEDEIRSHPAYLSYYYSHESINPRLPPPLLSKEDWRVA 132

Query: 132 QR-----ASVLGGIGDRRKVNRVDDSGARSLFATPPGFNSRKSESE 172
           QR     +S + G GD RK N   +  + SLF+  PGF+ ++ E++
Sbjct: 133 QRFHGGGSSSIEGFGDWRK-NVAPNGDSSSLFSMQPGFSVQQVEND 177