Miyakogusa Predicted Gene

Lj0g3v0253949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0253949.1 Non Chatacterized Hit- tr|I1JEL5|I1JEL5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8679 PE=,89.15,0,WD40
repeat-like,WD40-repeat-containing domain; WD40,WD40 repeat; WD40
repeats,WD40 repeat; no descr,CUFF.16661.1
         (128 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g13780.1                                                       247   2e-66
Glyma01g09290.1                                                       244   2e-65
Glyma15g05740.1                                                       216   5e-57
Glyma08g19260.1                                                       214   2e-56
Glyma20g26960.1                                                        55   1e-08
Glyma10g40440.1                                                        55   2e-08
Glyma20g26890.1                                                        53   6e-08
Glyma17g10100.1                                                        52   1e-07
Glyma05g01790.1                                                        49   1e-06
Glyma13g31790.1                                                        49   1e-06
Glyma15g07510.1                                                        49   1e-06
Glyma13g25350.1                                                        49   1e-06
Glyma05g09360.1                                                        47   5e-06
Glyma19g00890.1                                                        47   5e-06
Glyma05g21580.1                                                        47   6e-06
Glyma17g18140.1                                                        47   7e-06
Glyma02g16570.1                                                        46   8e-06

>Glyma02g13780.1 
          Length = 347

 Score =  247 bits (630), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 115/129 (89%), Positives = 127/129 (98%), Gaps = 1/129 (0%)

Query: 1   MSTFGAA-NTNPNKSHEVAQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEISKNGNVVN 59
           MSTFGAA NTNPNKS+EVAQPPSDS+SS+CFSPKANFLVATSWDNQVRCWEI++NG VVN
Sbjct: 1   MSTFGAAANTNPNKSYEVAQPPSDSISSICFSPKANFLVATSWDNQVRCWEITRNGTVVN 60

Query: 60  TTPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKDLAW 119
           +TPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPL+SGGQP+TVAMHDAP+KD+AW
Sbjct: 61  STPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLMSGGQPMTVAMHDAPVKDIAW 120

Query: 120 IPEISLLAT 128
           IPE++LLAT
Sbjct: 121 IPEMNLLAT 129


>Glyma01g09290.1 
          Length = 347

 Score =  244 bits (622), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 114/129 (88%), Positives = 126/129 (97%), Gaps = 1/129 (0%)

Query: 1   MSTFGAA-NTNPNKSHEVAQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEISKNGNVVN 59
           MSTFGAA NTNPNKS+EVAQPPSDS+SSLCFSPKANFLVATSWDNQVRCWEI++NG VVN
Sbjct: 1   MSTFGAAANTNPNKSYEVAQPPSDSISSLCFSPKANFLVATSWDNQVRCWEITRNGTVVN 60

Query: 60  TTPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKDLAW 119
           +TPKASISH+QPVLCSAWKDDGTTVFSGGCDKQVKMWPL SGGQP+TVAMHDAP+KD+AW
Sbjct: 61  STPKASISHEQPVLCSAWKDDGTTVFSGGCDKQVKMWPLTSGGQPMTVAMHDAPVKDIAW 120

Query: 120 IPEISLLAT 128
           IPE++LLA+
Sbjct: 121 IPEMNLLAS 129


>Glyma15g05740.1 
          Length = 347

 Score =  216 bits (550), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 104/129 (80%), Positives = 113/129 (87%), Gaps = 1/129 (0%)

Query: 1   MSTF-GAANTNPNKSHEVAQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEISKNGNVVN 59
           MS F    N NPNKS EV QPP+DSVSSL FSPKANFLVATSWDNQVRCWE+++NG  V 
Sbjct: 1   MSNFLSNTNPNPNKSFEVNQPPTDSVSSLSFSPKANFLVATSWDNQVRCWEVARNGVNVA 60

Query: 60  TTPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKDLAW 119
           T PKASI+HD PVLCS WKDDGTTVFSGGCDKQVKMWPLLSGGQP+TVAMHDAPIK+LAW
Sbjct: 61  TVPKASITHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPIKELAW 120

Query: 120 IPEISLLAT 128
           IPE++LL T
Sbjct: 121 IPEMNLLVT 129


>Glyma08g19260.1 
          Length = 347

 Score =  214 bits (545), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 103/129 (79%), Positives = 113/129 (87%), Gaps = 1/129 (0%)

Query: 1   MSTF-GAANTNPNKSHEVAQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEISKNGNVVN 59
           MS F    N NPNKS EV QPP+DSVSSL FSPKANFLVATSWDNQVRCWE+++NG  V 
Sbjct: 1   MSNFLSNTNPNPNKSFEVNQPPTDSVSSLSFSPKANFLVATSWDNQVRCWEVAQNGVNVA 60

Query: 60  TTPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKDLAW 119
           T PKASI+HD PVLCS WKDDGTTVFSGGCDKQVKMWPLLSGGQP+TVAMHDAPIK++AW
Sbjct: 61  TVPKASITHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPIKEVAW 120

Query: 120 IPEISLLAT 128
           IPE++LL T
Sbjct: 121 IPEMNLLVT 129


>Glyma20g26960.1 
          Length = 344

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 8/105 (7%)

Query: 15  HEVAQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEISKNGNVVNTTPKASISHDQPVLC 74
            E++ PPSD +++L FS  ++ L+ +SWD  VR ++ S N        +    H  PVL 
Sbjct: 10  RELSNPPSDGITNLRFSNHSDHLLVSSWDKSVRLYDASAN------VLRGEFMHAGPVLD 63

Query: 75  SAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKDLAW 119
             + DD ++ FS   D  V+   + S  +   +  HDAP++ + +
Sbjct: 64  CCFHDD-SSGFSAAADNTVRRL-VFSSNKEDILGRHDAPVRCIEY 106


>Glyma10g40440.1 
          Length = 340

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 8/113 (7%)

Query: 7   ANTNPNKSHEVAQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEISKNGNVVNTTPKASI 66
           A+  P    E++ PPSD +++L FS  ++ L+ +SWD  VR ++ S N        +   
Sbjct: 2   ASAVPATGRELSNPPSDGITNLRFSNHSDHLLVSSWDKSVRLYDASAN------VLRGEF 55

Query: 67  SHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKDLAW 119
            H  PVL   + DD ++ FS   D  V+   + S  +   +  HDAP++ + +
Sbjct: 56  MHAGPVLDCCFHDD-SSGFSVAADNTVRRL-VFSSNKEDILGRHDAPVRCVEY 106


>Glyma20g26890.1 
          Length = 366

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 8/109 (7%)

Query: 7   ANTNPNKSHEVAQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEISKNGNVVNTTPKASI 66
           A+  P    E++ PP D +++L FS  ++ L+ +SWD  VR ++ S N        +   
Sbjct: 11  ASAVPATGRELSNPPLDGITNLRFSNHSDHLLVSSWDKSVRLYDASAN------VLRGEF 64

Query: 67  SHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIK 115
            H  PVL   + DD ++ FS   D  V+   + S  +   +  HDAP++
Sbjct: 65  MHAGPVLDCCFHDD-SSGFSVAADNTVRRL-VFSSNKEDILGRHDAPVR 111


>Glyma17g10100.1 
          Length = 406

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 9/108 (8%)

Query: 23  DSVSSLCFSPKANFLVATSWDNQVRCWEISKNGNVVNTTPKASISHDQPVLCSAWKDDGT 82
           D+VSS+  S   NFL + SWD  ++ W  +K+   + +   A   HD  +   A   DG 
Sbjct: 185 DTVSSIALSQDGNFLYSVSWDRTIKVWR-TKDLACLESVRNA---HDDAINAVAVSYDG- 239

Query: 83  TVFSGGCDKQVKMWPLLSGGQPV----TVAMHDAPIKDLAWIPEISLL 126
            V++G  DK++++W  L G + +    T+  H++ I  LA   + S+L
Sbjct: 240 HVYTGSADKRIRVWKKLEGEKKLSLVDTLEKHNSGINALALKSDGSVL 287


>Glyma05g01790.1 
          Length = 394

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 9/108 (8%)

Query: 23  DSVSSLCFSPKANFLVATSWDNQVRCWEISKNGNVVNTTPKASISHDQPVLCSAWKDDGT 82
           D+VSSL  S    FL + SWD  ++ W  +K+   + +   A   HD  +   A   DG 
Sbjct: 173 DTVSSLALSKDGTFLYSVSWDRTIKVWR-TKDFACLESVRDA---HDDAINAVAVSYDG- 227

Query: 83  TVFSGGCDKQVKMWPLLSGGQPV----TVAMHDAPIKDLAWIPEISLL 126
            V++G  DK++++W  L G +      T+  H++ I  LA   + S+L
Sbjct: 228 YVYTGSADKRIRVWKKLEGEKKHSLVDTLEKHNSGINALALSADGSVL 275


>Glyma13g31790.1 
          Length = 824

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 5/99 (5%)

Query: 30  FSPKANFLVATSWDNQVRCWEISKNGNVVNTTPKASISHDQPVLCSAWKDDGTTVFSGGC 89
           F P   F  + S D  ++ W+I K G +          H Q +    +  DG  V SGG 
Sbjct: 108 FHPFGEFFASGSMDTNLKIWDIRKKGCI-----HTYKGHSQGISIIKFTPDGRWVVSGGF 162

Query: 90  DKQVKMWPLLSGGQPVTVAMHDAPIKDLAWIPEISLLAT 128
           D  VK+W L +G        H+  I+ + + P   LLAT
Sbjct: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLAT 201


>Glyma15g07510.1 
          Length = 807

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 5/99 (5%)

Query: 30  FSPKANFLVATSWDNQVRCWEISKNGNVVNTTPKASISHDQPVLCSAWKDDGTTVFSGGC 89
           F P   F  + S D  ++ W+I K G +          H Q +    +  DG  V SGG 
Sbjct: 108 FHPFGEFFASGSMDTNLKIWDIRKKGCI-----HTYKGHSQGISTIKFTPDGRWVVSGGF 162

Query: 90  DKQVKMWPLLSGGQPVTVAMHDAPIKDLAWIPEISLLAT 128
           D  VK+W L +G        H+  I+ + + P   LLAT
Sbjct: 163 DNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLAT 201


>Glyma13g25350.1 
          Length = 819

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 5/99 (5%)

Query: 30  FSPKANFLVATSWDNQVRCWEISKNGNVVNTTPKASISHDQPVLCSAWKDDGTTVFSGGC 89
           F P   F  + S D  +  W+I K G +     +    H Q +    +  DG  V SGG 
Sbjct: 108 FHPFGEFFASGSLDTNLNIWDIRKKGCI-----QTYKGHSQGISTIKFSPDGRWVVSGGF 162

Query: 90  DKQVKMWPLLSGGQPVTVAMHDAPIKDLAWIPEISLLAT 128
           D  VK+W L  G        H+  I+ L + P   L+AT
Sbjct: 163 DNVVKVWDLTGGKLLHDFKFHEGHIRSLDFHPLEFLMAT 201


>Glyma05g09360.1 
          Length = 526

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 5/103 (4%)

Query: 26  SSLCFSPKANFLVATSWDNQVRCWEISKNGNVVNTTPKASISHDQPVLCSAWKDDGTTVF 85
           +S+ F P   F  + S D  ++ W+I K G +   T K    H + V    +  DG  V 
Sbjct: 105 TSVDFHPFGEFFASGSLDTNLKIWDIRKKGCI--HTYKG---HTRGVNAIRFTPDGRWVV 159

Query: 86  SGGCDKQVKMWPLLSGGQPVTVAMHDAPIKDLAWIPEISLLAT 128
           SGG D  VK+W L +G        H+  ++ + + P   LLAT
Sbjct: 160 SGGEDNTVKLWDLTAGKLLHDFKCHEGQVQCIDFHPNEFLLAT 202


>Glyma19g00890.1 
          Length = 788

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 5/103 (4%)

Query: 26  SSLCFSPKANFLVATSWDNQVRCWEISKNGNVVNTTPKASISHDQPVLCSAWKDDGTTVF 85
           +S+ F P   F  + S D  ++ W+I K G +   T K    H + V    +  DG  V 
Sbjct: 105 TSVDFHPFGEFFASGSLDTNLKIWDIRKKGCI--HTYKG---HTRGVNAIRFTPDGRWVV 159

Query: 86  SGGCDKQVKMWPLLSGGQPVTVAMHDAPIKDLAWIPEISLLAT 128
           SGG D  VK+W L +G        H+  I+ + + P   LLAT
Sbjct: 160 SGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPNEFLLAT 202


>Glyma05g21580.1 
          Length = 624

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 6/104 (5%)

Query: 22  SDSVSSLCFSPKANFLVATSWDNQVRCWEISKNGNVVNTTPKASISHDQPVLCSAWKDDG 81
           S  V++L ++ +   L   S+D Q R W  + NG + +T  K    H  P+    W   G
Sbjct: 335 SKDVTTLDWNGEGTLLATGSYDGQARIW--TTNGELKSTLSK----HKGPIFSLKWNKKG 388

Query: 82  TTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKDLAWIPEISL 125
             + +G CD+   +W + +         H  P  D+ W   +S 
Sbjct: 389 DYLLTGSCDQTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSF 432


>Glyma17g18140.1 
          Length = 614

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 6/104 (5%)

Query: 22  SDSVSSLCFSPKANFLVATSWDNQVRCWEISKNGNVVNTTPKASISHDQPVLCSAWKDDG 81
           S  V++L ++ +   L   S+D Q R W  + NG + +T  K    H  P+    W   G
Sbjct: 325 SKDVTTLDWNGEGTLLATGSYDGQARIW--TTNGELKSTLSK----HKGPIFSLKWNKKG 378

Query: 82  TTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKDLAWIPEISL 125
             + +G CD+   +W + +         H  P  D+ W   +S 
Sbjct: 379 DYLLTGSCDQTAIVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSF 422


>Glyma02g16570.1 
          Length = 320

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 5/103 (4%)

Query: 16  EVAQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEISKNGNVVNTTPKASISHDQPVLCS 75
           ++ +   D V  + F+P+++++V+ S+D  ++ W++ K G  V+T       H  PV   
Sbjct: 109 KILRGHDDVVFCVNFNPQSSYIVSGSFDETIKVWDV-KTGKCVHTIK----GHTMPVTSV 163

Query: 76  AWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKDLA 118
            +  DGT + S   D   K+W   +G    T+    AP    A
Sbjct: 164 HYNRDGTLIISASHDGSCKIWDTRTGNLLKTLIEDKAPAVSFA 206