Miyakogusa Predicted Gene

Lj0g3v0253839.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0253839.1 Non Chatacterized Hit- tr|I3SPD0|I3SPD0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.48,0,TRAPP,Transport protein particle (TRAPP) component;
Ligand-binding domain in the NO signalling and G,CUFF.16690.1
         (194 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g03480.1                                                       392   e-109
Glyma11g34840.1                                                       391   e-109

>Glyma18g03480.1 
          Length = 219

 Score =  392 bits (1006), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/194 (97%), Positives = 192/194 (98%)

Query: 1   MIGVGKMKQYSNVLDKPLTKGKQEVSLSAFAFLFSELVQYNQTQVDNIGELERRLEDAGY 60
           MIGVGK+KQYSNVLDKPLTKGKQEVSLSAFAFLFSELVQYNQTQVDNIGELERRLEDAGY
Sbjct: 26  MIGVGKIKQYSNVLDKPLTKGKQEVSLSAFAFLFSELVQYNQTQVDNIGELERRLEDAGY 85

Query: 61  AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELLCHR+KGNRRETRLL ILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 86  AVGARVLELLCHRDKGNRRETRLLNILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 145

Query: 121 KELLVNKFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQRPRTTILI 180
           KELLVNKFISIPKDMGTFNCGAFVAGIVRGVLD AGFPAVVTAHFVPMEGQQRPRTTILI
Sbjct: 146 KELLVNKFISIPKDMGTFNCGAFVAGIVRGVLDGAGFPAVVTAHFVPMEGQQRPRTTILI 205

Query: 181 KFAEEVLRREARLG 194
           KFAEEVLRREARLG
Sbjct: 206 KFAEEVLRREARLG 219


>Glyma11g34840.1 
          Length = 194

 Score =  391 bits (1004), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/194 (97%), Positives = 193/194 (99%)

Query: 1   MIGVGKMKQYSNVLDKPLTKGKQEVSLSAFAFLFSELVQYNQTQVDNIGELERRLEDAGY 60
           MIGVGK+KQYSNVLDKPLTKGKQEVSLSAFAFLFSELVQYNQTQVDNIGELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLDKPLTKGKQEVSLSAFAFLFSELVQYNQTQVDNIGELERRLEDAGY 60

Query: 61  AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELLCHR+KGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNKFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQRPRTTILI 180
           KELLVNKFISIPKDMGTFNCGAFVAGIVRGVLD AGFPAVVTAHFVPMEGQQRPRTTILI
Sbjct: 121 KELLVNKFISIPKDMGTFNCGAFVAGIVRGVLDGAGFPAVVTAHFVPMEGQQRPRTTILI 180

Query: 181 KFAEEVLRREARLG 194
           KFAEEVL+REARLG
Sbjct: 181 KFAEEVLQREARLG 194