Miyakogusa Predicted Gene

Lj0g3v0253809.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0253809.1 Non Chatacterized Hit- tr|D8TQD6|D8TQD6_VOLCA
Putative uncharacterized protein OS=Volvox carteri GN=,27.36,5e-18,no
description,Armadillo-like helical; ARM repeat,Armadillo-type fold;
DUF2454,Protein of unknown fu,CUFF.16650.1
         (449 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g03500.1                                                       618   e-177
Glyma11g34810.1                                                       119   7e-27

>Glyma18g03500.1 
          Length = 430

 Score =  618 bits (1594), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 317/451 (70%), Positives = 359/451 (79%), Gaps = 27/451 (5%)

Query: 3   ESFSSSSMLNDLLVRLSKPISESLLTTPYTPHQGSNVSIKAFIKPLLSFRNPNIHSSIQD 62
           ES S  S   DLL+RLS  I+ESL T PYTPHQ SNVS+KAF++PLL    P   ++++D
Sbjct: 2   ESPSPPSPFRDLLLRLSTGIAESLATVPYTPHQSSNVSVKAFLEPLLV---PT--ATVRD 56

Query: 63  FXXXXXXXXXXXXX-XXXXXXWIPNHLSSLATASFFEVSRAYLTVFDDRNSRFLAELGLI 121
           F                    WIP++LSSLAT+SF ++SRAYL       +R        
Sbjct: 57  FALACALISSSTAVDSSGILSWIPSNLSSLATSSFSDLSRAYL------GNR-------- 102

Query: 122 GDVVPPPEKRLLLEMMPEVLPDLKDRIKESSIDKSDENNEFSAASARVPAVFAILAAFQF 181
            D+  PPEKRL+LE+MPEVLP LK+RIKESSID SDE +EFSAA+ARVP  FAILAAFQF
Sbjct: 103 -DLAVPPEKRLVLELMPEVLPFLKERIKESSIDVSDETDEFSAATARVPVGFAILAAFQF 161

Query: 182 RWFVIQVDYPHLGKLCGLVIPCALTAVDHWSPAVKGQGMITLTYLGRNVDAAELDRYKDV 241
           RWFV QVDYPHLGKLCGLVIPCALTAVDHWSP VKGQGMI+L ++G+NVDAA+L  Y DV
Sbjct: 162 RWFVTQVDYPHLGKLCGLVIPCALTAVDHWSPVVKGQGMISLMHVGKNVDAAQLGGYVDV 221

Query: 242 ILDACCQNIASDDEIWHLVVEASVVLVTLTQKRNPRSPWFERMLNEMLSHLERQPRNKER 301
           ILDACCQN ASDDEIWH VVEASVVLVTLTQ+ NPRSPWFERMLNEMLSHLERQPRNKER
Sbjct: 222 ILDACCQNTASDDEIWHHVVEASVVLVTLTQRSNPRSPWFERMLNEMLSHLERQPRNKER 281

Query: 302 RIAWLKSADPLFNGVGLMLLAHFRRIFPLFFQWMHADDDDTVILVLKCTFILLRLTWIRK 361
           RIAWLKSAD LFNGVG+MLLAHFRRIFPLFFQWMHADD++T+ILVLKCT+++LRLTWIR 
Sbjct: 282 RIAWLKSADSLFNGVGIMLLAHFRRIFPLFFQWMHADDNETIILVLKCTYVILRLTWIRN 341

Query: 362 SPYVVRLVDELVLVYKEAALRTAREGIRANTCQILILLQESKGMHFNVAWEKHRQDPDLT 421
           SP+V RLVD+L LVYKEAALRTARE IRAN CQILILLQ SKG++FN AW+KHR DPDLT
Sbjct: 342 SPFVARLVDKLALVYKEAALRTAREEIRANICQILILLQGSKGLYFNAAWDKHRSDPDLT 401

Query: 422 TLHLSLSRRNNTNLDTLLSE----KGPAPVQ 448
           TL  SLS R+NTN  T+ SE    +G  PVQ
Sbjct: 402 TLDFSLSGRSNTN--TVPSEDCPQQGLVPVQ 430


>Glyma11g34810.1 
          Length = 65

 Score =  119 bits (298), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 55/65 (84%), Positives = 59/65 (90%)

Query: 281 FERMLNEMLSHLERQPRNKERRIAWLKSADPLFNGVGLMLLAHFRRIFPLFFQWMHADDD 340
           FER LNEMLSHLERQPRNKER I WLKSAD LFNGVGLMLLAHFRRIFPL FQWMHAD++
Sbjct: 1   FERKLNEMLSHLERQPRNKERCITWLKSADSLFNGVGLMLLAHFRRIFPLLFQWMHADNN 60

Query: 341 DTVIL 345
           + +IL
Sbjct: 61  EIIIL 65