Miyakogusa Predicted Gene

Lj0g3v0253719.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0253719.1 Non Chatacterized Hit- tr|I6M4F5|I6M4F5_COFCA
Uncharacterized protein OS=Coffea canephora PE=4
SV=1,100,0.0000000002,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.16647.1
         (185 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g36950.1                                                        70   9e-13
Glyma09g00310.1                                                        70   1e-12

>Glyma12g36950.1 
          Length = 364

 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 30/30 (100%), Positives = 30/30 (100%)

Query: 1   MNGQYLCNRQITVSYAYKKDTKGERHGTPA 30
           MNGQYLCNRQITVSYAYKKDTKGERHGTPA
Sbjct: 174 MNGQYLCNRQITVSYAYKKDTKGERHGTPA 203


>Glyma09g00310.1 
          Length = 397

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 30/30 (100%), Positives = 30/30 (100%)

Query: 1   MNGQYLCNRQITVSYAYKKDTKGERHGTPA 30
           MNGQYLCNRQITVSYAYKKDTKGERHGTPA
Sbjct: 174 MNGQYLCNRQITVSYAYKKDTKGERHGTPA 203