Miyakogusa Predicted Gene

Lj0g3v0253369.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0253369.1 Non Chatacterized Hit- tr|I1PA63|I1PA63_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,35.61,1e-18,CCT,CCT domain;
seg,NULL,NODE_34062_length_1388_cov_165.608063.path2.1
         (369 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g19870.2                                                       453   e-127
Glyma10g05520.1                                                       368   e-102
Glyma13g19870.3                                                       335   5e-92
Glyma13g19870.1                                                       334   8e-92
Glyma11g15560.1                                                        87   2e-17

>Glyma13g19870.2 
          Length = 373

 Score =  453 bits (1166), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/370 (63%), Positives = 254/370 (68%), Gaps = 3/370 (0%)

Query: 1   MHGAKFEALNRRPKSSDIENKGTNDDEEFPSLELSLKRLRGVNDAGITIQDERIVLRRSD 60
           MH   FEAL ++PKSSDIENK TN+DEE PSLELSLKRLRGV DAGI IQD+R VLRRSD
Sbjct: 1   MHSGGFEALYKKPKSSDIENKDTNNDEELPSLELSLKRLRGVEDAGIAIQDDRNVLRRSD 60

Query: 61  QSAFSRYNAASNTKKSPTGCVGSNSPHNNSLEITKKDSSRDIQSHSSGNPPNQNSNVASN 120
           QSAFSRYNAA N KKSPTGCVGSNSPHNNSLE+TKKDSS DIQSHSSGNPPNQNSN ASN
Sbjct: 61  QSAFSRYNAALNPKKSPTGCVGSNSPHNNSLEVTKKDSSHDIQSHSSGNPPNQNSNGASN 120

Query: 121 NIDMGSTTNNAFTKSAVKSEPGVASETKCLYQTSAFQPLKNNLICASQRVIVHNTEDTTT 180
           NIDMGSTTNNA+ KSAV SEP VAS TKCLYQTSA+QP KNNL+C SQ+V++HNTEDTT 
Sbjct: 121 NIDMGSTTNNAYAKSAVISEPAVASTTKCLYQTSAYQPEKNNLVCTSQQVVLHNTEDTTA 180

Query: 181 PMVAPLKVDTHKDSATQDFHFRHENHNCIANSVQHQLPPDHDAESLKKMAVTAPHCGSSN 240
            M+AP K+D HKDSA  DFH   ENHNCIA++++HQLPPDHDAES+KKMA  APHCGSSN
Sbjct: 181 TMLAPPKLDRHKDSAAPDFHLHCENHNCIADNMKHQLPPDHDAESIKKMATAAPHCGSSN 240

Query: 241 ---VVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 297
              V+VE                                                     
Sbjct: 241 AVEVLVEGNVGNHSINRSASGSNNGSNGQNGSSTAVNAGGTNMKSNNGLTGNSGSGDASG 300

Query: 298 XXXXXRVDQNKASQRQAALTXXXXXXXXXXXXCFHKKVRYQSRKRLAEXXXXXXXXXXXX 357
                RVDQNK SQR+AALT            CFHKKVRYQSRKRLAE            
Sbjct: 301 SVSANRVDQNKTSQREAALTKFRQKRKERRERCFHKKVRYQSRKRLAEQRPRFRGQFVRQ 360

Query: 358 SSNENASEAT 367
           SSNENASEAT
Sbjct: 361 SSNENASEAT 370


>Glyma10g05520.1 
          Length = 683

 Score =  368 bits (945), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/240 (75%), Positives = 199/240 (82%), Gaps = 12/240 (5%)

Query: 1   MHGAKFEALNRRPKSSDIENKGTNDDEEFPSLELSLKRLRGVNDAGITIQDERIVLRRSD 60
           MH  +FEALN++PKSSDIENKGTN+DEE PSLELSLKRLRGV DA ITIQD+R VLRRSD
Sbjct: 371 MHSGEFEALNKKPKSSDIENKGTNNDEELPSLELSLKRLRGVEDADITIQDDRNVLRRSD 430

Query: 61  QSAFSRYNAASNTKKSPTGCVGSNSPHNNSLEITKKDSSRDIQSHSSGNPPNQNSNVASN 120
           QSAFSRYNAASNTKKSPTGCVGSNSP+NNSLE+TKKDSSRDIQSHS GNPPNQNSN ASN
Sbjct: 431 QSAFSRYNAASNTKKSPTGCVGSNSPYNNSLEVTKKDSSRDIQSHSCGNPPNQNSNGASN 490

Query: 121 NIDMGSTTNNAFTKSAVKSEPGVASETKCLYQTSAFQPLKNNLICASQRVIVHNTEDTTT 180
           NIDMGSTTNNA+ KSAV SEP  AS TKCLYQTSAFQP+KN+L+  S  ++         
Sbjct: 491 NIDMGSTTNNAYAKSAVMSEPAGASTTKCLYQTSAFQPVKNSLVYMSATIL--------- 541

Query: 181 PMVAPLKVDTHKDSATQDFHFRHENHNCIANSVQHQLPPDHDAESLKKMAVTAPHCGSSN 240
              AP K+D HKDSA  DFH   ENHNCIA++++HQLPPDHDAES+KKMA  APHC   N
Sbjct: 542 ---APPKLDRHKDSAALDFHLHCENHNCIADNMKHQLPPDHDAESIKKMATAAPHCNVGN 598


>Glyma13g19870.3 
          Length = 523

 Score =  335 bits (859), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 185/335 (55%), Positives = 199/335 (59%), Gaps = 35/335 (10%)

Query: 1   MHGAKFEALNRRPKSSDIENKGTNDDEEFPSLELSLKRLRGVNDAGITIQDERIVLRRSD 60
           MH   FEAL ++PKSSDIENK TN+DEE PSLELSLKRLRGV DAGI IQD+R VLRRSD
Sbjct: 200 MHSGGFEALYKKPKSSDIENKDTNNDEELPSLELSLKRLRGVEDAGIAIQDDRNVLRRSD 259

Query: 61  QSAFSRYNAASNTKKSPTGCVGSNSPHNNSLEITKKDSSRDIQSHSSGNPPNQNSNVASN 120
           QSAFSRYNAA N KKSPTGCVGSNSPHNNSLE+TKKDSS DIQSHSSGNPPNQNSN ASN
Sbjct: 260 QSAFSRYNAALNPKKSPTGCVGSNSPHNNSLEVTKKDSSHDIQSHSSGNPPNQNSNGASN 319

Query: 121 NIDMGSTTNNAFTKSAVKSEPGVASETKCLYQTSAFQPLKNNLICASQRVIVHNTEDTTT 180
           NIDMGSTTNNA+ KSAV SEP VAS TK                             TT 
Sbjct: 320 NIDMGSTTNNAYAKSAVISEPAVASTTKY----------------------------TTA 351

Query: 181 PMVAPLKVDTHKDSATQDFHFRHENHNCIANSVQHQLPPDHDAESLKKMAVTAPHCGSSN 240
            M+AP K+D HKDSA  DFH   ENHNCIA++++HQLPPDHDAES+KKMA  APH     
Sbjct: 352 TMLAPPKLDRHKDSAAPDFHLHCENHNCIADNMKHQLPPDHDAESIKKMATAAPH----- 406

Query: 241 VVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
              E                                                        
Sbjct: 407 --FEGNVGNHSINRSASGSNNGSNGQNGSSTAVNAGGTNMKSNNGLTGNSGSGDASGSVS 464

Query: 301 XXRVDQNKASQRQAALTXXXXXXXXXXXXCFHKKV 335
             RVDQNK SQR+AALT            CFHKKV
Sbjct: 465 ANRVDQNKTSQREAALTKFRQKRKERRERCFHKKV 499


>Glyma13g19870.1 
          Length = 549

 Score =  334 bits (857), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 185/335 (55%), Positives = 199/335 (59%), Gaps = 35/335 (10%)

Query: 1   MHGAKFEALNRRPKSSDIENKGTNDDEEFPSLELSLKRLRGVNDAGITIQDERIVLRRSD 60
           MH   FEAL ++PKSSDIENK TN+DEE PSLELSLKRLRGV DAGI IQD+R VLRRSD
Sbjct: 226 MHSGGFEALYKKPKSSDIENKDTNNDEELPSLELSLKRLRGVEDAGIAIQDDRNVLRRSD 285

Query: 61  QSAFSRYNAASNTKKSPTGCVGSNSPHNNSLEITKKDSSRDIQSHSSGNPPNQNSNVASN 120
           QSAFSRYNAA N KKSPTGCVGSNSPHNNSLE+TKKDSS DIQSHSSGNPPNQNSN ASN
Sbjct: 286 QSAFSRYNAALNPKKSPTGCVGSNSPHNNSLEVTKKDSSHDIQSHSSGNPPNQNSNGASN 345

Query: 121 NIDMGSTTNNAFTKSAVKSEPGVASETKCLYQTSAFQPLKNNLICASQRVIVHNTEDTTT 180
           NIDMGSTTNNA+ KSAV SEP VAS TK                             TT 
Sbjct: 346 NIDMGSTTNNAYAKSAVISEPAVASTTKY----------------------------TTA 377

Query: 181 PMVAPLKVDTHKDSATQDFHFRHENHNCIANSVQHQLPPDHDAESLKKMAVTAPHCGSSN 240
            M+AP K+D HKDSA  DFH   ENHNCIA++++HQLPPDHDAES+KKMA  APH     
Sbjct: 378 TMLAPPKLDRHKDSAAPDFHLHCENHNCIADNMKHQLPPDHDAESIKKMATAAPH----- 432

Query: 241 VVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
              E                                                        
Sbjct: 433 --FEGNVGNHSINRSASGSNNGSNGQNGSSTAVNAGGTNMKSNNGLTGNSGSGDASGSVS 490

Query: 301 XXRVDQNKASQRQAALTXXXXXXXXXXXXCFHKKV 335
             RVDQNK SQR+AALT            CFHKKV
Sbjct: 491 ANRVDQNKTSQREAALTKFRQKRKERRERCFHKKV 525


>Glyma11g15560.1 
          Length = 406

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 100/202 (49%), Gaps = 17/202 (8%)

Query: 28  EFPSLELSLKRLRGVNDAGITIQDERIVLRRSDQSAFSRYNAASNTKKSPTGCVGSNSPH 87
           E PSLEL+L+RL  V D      +E  VLR SDQSAFS+YN AS   ++ TG VGS SP 
Sbjct: 128 EHPSLELTLERLGEVRDGKNFTGEECNVLRHSDQSAFSKYNTAS-ANQAQTGNVGSCSPL 186

Query: 88  NNSLEITKKDSSRDIQSHSSGNPPNQNSNVASNNI-DMGSTTNNAFTKSAV-----KSEP 141
           +NS      ++  +  SHS+G PPNQ SN  SNNI DM S      TK        +S  
Sbjct: 187 DNSSAAPNTETMHNFASHSNGTPPNQQSN-GSNNINDMASINTYLGTKLDTFDKKPESGR 245

Query: 142 GVASETKCLYQTSAFQPLKNNLICASQRVIVHNTEDTTTPMVAPLKVDTHKDSATQDFH- 200
           G+ S     + +   Q L+ N IC+SQ+      E+ T  +   +    H       ++ 
Sbjct: 246 GIGS-----FNSRELQTLQKNNICSSQKKTTAR-EEYTEIIKESVGGSEHGFQVEHTYYQ 299

Query: 201 FRHENHNCIANSVQHQLPPDHD 222
             H NH  IA+     L  DHD
Sbjct: 300 LHHYNH--IAHKAAVDLQSDHD 319