Miyakogusa Predicted Gene

Lj0g3v0252939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0252939.1 Non Chatacterized Hit- tr|I1MKV7|I1MKV7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,47.92,0.0000002,
,CUFF.16621.1
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g03970.1                                                        60   8e-10
Glyma19g29580.2                                                        51   4e-07
Glyma19g29580.1                                                        51   4e-07

>Glyma16g03970.1 
          Length = 655

 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 33/48 (68%)

Query: 1  MMFCDLCVKFVTGLRINDALVCCNECGKMLVNLFMPEEPNFEKNSAGQ 48
          M++C  C K V G R++D  +CC  CG++L + F  EEP+F KN+AGQ
Sbjct: 1  MVYCSHCAKNVAGERLDDGFLCCGSCGRVLEDYFFAEEPSFVKNAAGQ 48


>Glyma19g29580.2 
          Length = 481

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 54/110 (49%), Gaps = 28/110 (25%)

Query: 48  QQIKQRRAEEAKNLGPPQSAAEATKQMLITKQVAP------------------------K 83
           ++++Q+RA EAKN  P QSAAEA  QM   K+                           K
Sbjct: 351 KEMRQKRAYEAKNTRPAQSAAEAFGQMSNKKRNLQGLKSKVNFELLNELFDEMENTDDLK 410

Query: 84  NPKKVRSS---DNHDYLKSKFEDKIQDDDLGLVDEFEDGGMHEDYYGNAD 130
            PKKVR     DN D + SK EDK  +D++GL DEF+D G   + Y N +
Sbjct: 411 KPKKVRFDLPLDNDDNIPSKVEDK-NEDEMGLADEFDDEGDMGEMYQNTE 459


>Glyma19g29580.1 
          Length = 483

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 54/110 (49%), Gaps = 28/110 (25%)

Query: 48  QQIKQRRAEEAKNLGPPQSAAEATKQMLITKQVAP------------------------K 83
           ++++Q+RA EAKN  P QSAAEA  QM   K+                           K
Sbjct: 353 KEMRQKRAYEAKNTRPAQSAAEAFGQMSNKKRNLQGLKSKVNFELLNELFDEMENTDDLK 412

Query: 84  NPKKVRSS---DNHDYLKSKFEDKIQDDDLGLVDEFEDGGMHEDYYGNAD 130
            PKKVR     DN D + SK EDK  +D++GL DEF+D G   + Y N +
Sbjct: 413 KPKKVRFDLPLDNDDNIPSKVEDK-NEDEMGLADEFDDEGDMGEMYQNTE 461