Miyakogusa Predicted Gene

Lj0g3v0252879.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0252879.3 Non Chatacterized Hit- tr|D8SXF4|D8SXF4_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,47.14,0.00000000000006,zinc finger,Zinc finger, CCCH-type;
seg,NULL; GB DEF: ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME
5,CUFF.16615.3
         (701 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g39390.1                                                       286   7e-77
Glyma18g10310.1                                                       229   7e-60
Glyma08g43270.1                                                       176   7e-44

>Glyma14g39390.1 
          Length = 356

 Score =  286 bits (731), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 172/323 (53%), Positives = 199/323 (61%), Gaps = 56/323 (17%)

Query: 380 ELGVERLKLLPVQKEKTISYCRHYLYGRCNEGDKCQFSHDTVPKTKSKACHHFARHSCMK 439
           +LGV+RL+L  VQK K +S+CRHYL GRC+EGDKCQFSHD VP TKSK C HFARHSCMK
Sbjct: 32  QLGVKRLQLQHVQKPKVVSHCRHYLNGRCHEGDKCQFSHDVVPLTKSKPCTHFARHSCMK 91

Query: 440 GDDCPYDHELSKYPCNNFVSSGSCWRGDTCMFSHQVPANQDIPTPSNVCKPQAASPLNNH 499
           GDDCP+DH+LSKYPC NFVS GSC+RGD C+FSHQ                   S L+  
Sbjct: 92  GDDCPFDHQLSKYPCTNFVSKGSCYRGDACLFSHQ-------------------SCLHFC 132

Query: 500 GFKSIQQNHLKGISSLIKPDHNMVADTSQKQPTPAPKGIRFINAAKLSPSPSTLKQGMLT 559
               I  +HL  I +L+  +H  V +T QKQPTP PKGI FIN AKLSPS S+LKQ  +T
Sbjct: 133 LEMQIPAHHLTTIMALLLVEHK-VTNTVQKQPTP-PKGISFINLAKLSPSLSSLKQSTVT 190

Query: 560 PNKESLVQHGTLADRSASGTSTTQSIVEISKKLPAVAPKGINFLSFGKGPVCSFKSSMSF 619
             K S VQ GT  D+S+     TQ+ V+I KKLPAV PKGINFLSFGKG   S KSS+  
Sbjct: 191 -TKGSPVQIGTREDQSS--FHKTQNKVDIPKKLPAVTPKGINFLSFGKG---SEKSSL-- 242

Query: 620 HVNRENGIKLPQVFNFGLPYQASPSIDKDGSGKVSDGTK-NVPQTDLSSNEILNKVLSVA 678
                                     +KD   K SD TK N PQTD+   EIL K  SVA
Sbjct: 243 --------------------------NKDDYNKASDTTKQNAPQTDIFLTEILGKNQSVA 276

Query: 679 EEMKSKFPGKASKDDSAKDNSRS 701
           EEMK K P K S D   +D+S S
Sbjct: 277 EEMKLKLPEKTSVDFFMRDHSHS 299


>Glyma18g10310.1 
          Length = 335

 Score =  229 bits (584), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 170/323 (52%), Gaps = 94/323 (29%)

Query: 380 ELGVERLKLLPVQKEKTISYCRHYLYGRCNEGDKCQFSHDTVPKTKSKACHHFARHSCMK 439
           +LGV+RL+L  VQ+ K +S+CRHYL GRC+EGDKCQFSHD VP      C HFAR SCMK
Sbjct: 59  QLGVKRLQLKHVQRPKVVSHCRHYLNGRCHEGDKCQFSHD-VP------CTHFARQSCMK 111

Query: 440 GDDCPYDHELSKYPCNNFVSSGSCWRGDTCMFSHQVPANQDIPTPSNVCKPQAASPLNNH 499
           GDDCP+DH+LSKYPC NFVS GSC+RGD C+FSHQV   +DIPTPSN+C+P+ +  L+ +
Sbjct: 112 GDDCPFDHQLSKYPCTNFVSKGSCYRGDACLFSHQVSTKEDIPTPSNMCRPELSPLLSGN 171

Query: 500 GFKSIQQNHLKGISSLIKPDHNMVADTSQKQPTPAPKGIRFINAAKLSPSPSTLKQGMLT 559
              S   N+  G SS+                                      KQ  LT
Sbjct: 172 ANSSAPLNNNHGSSSV--------------------------------------KQNHLT 193

Query: 560 PNKESLVQHGTLADRSASGTSTTQSIVEISKKLPAVAPKGINFLSFGKGPVCSFKSSMSF 619
                          +++G  +  S+    KKLP V PKGINFLSFGKG           
Sbjct: 194 ---------------NSAGIHSCTSVEH--KKLPTVTPKGINFLSFGKG----------- 225

Query: 620 HVNRENGIKLPQVFNFGLPYQASPSIDKDGSGKVSDGTK-NVPQTDLSSNEILNKVLSVA 678
                                A  S++KD   K SD TK N PQTD+   EIL K  SVA
Sbjct: 226 --------------------SAKSSLNKDDYNKASDKTKQNAPQTDIFLTEILGKNQSVA 265

Query: 679 EEMKSKFPGKASKDDSAKDNSRS 701
           EEMKSK P K S D   +D+S S
Sbjct: 266 EEMKSKLPEKTSVDVFMRDHSHS 288


>Glyma08g43270.1 
          Length = 327

 Score =  176 bits (447), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 94/167 (56%), Positives = 115/167 (68%), Gaps = 23/167 (13%)

Query: 425 KSKACHHFARHSCMKGDDCPYDHELSKYPCNNFVSSGSCWRGDTCMFSHQVPANQDIPTP 484
           K + C HFARHSCMKGDDCP+DH+LSKYPC+NFVS GSC+RGD C+FSHQVP  +DIPTP
Sbjct: 149 KLRPCTHFARHSCMKGDDCPFDHQLSKYPCSNFVSKGSCYRGDACLFSHQVPTKEDIPTP 208

Query: 485 SNVCKPQ----------AASPL-NNHGFKSIQQNHLKGISSLIKPDH------NMVADTS 527
           SN+C+P+           ++PL NNHG  S+Q+NH    SS    +H      + V +T 
Sbjct: 209 SNMCRPELSPLLYGNANWSTPLNNNHGSSSVQKNH----SSNSAGNHPSTSVEHKVTNTV 264

Query: 528 QKQPTPAPKGIRFINAAKLSPSPSTLKQGMLTPNKESLVQHGTLADR 574
           QKQP P PK I FIN AKLSPS S+LKQ  +T  KES VQ GT+  +
Sbjct: 265 QKQPRP-PKRISFINLAKLSPSLSSLKQSTVT-TKESPVQIGTVKSK 309



 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 31/48 (64%)

Query: 1  MAELEMVVNGVDDLVRDIGLIPLNSGLGEKQNDSSEVELMDYQVEHAE 48
          M E E V+ G ++L+ D GLIPLN GL +  ND  E E MDYQVE  E
Sbjct: 29 MIEFEQVMKGTENLICDSGLIPLNLGLDKTHNDGGEAEPMDYQVEMEE 76