Miyakogusa Predicted Gene

Lj0g3v0252719.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0252719.1 Non Chatacterized Hit- tr|D8RVD9|D8RVD9_SELML
Putative uncharacterized protein OS=Selaginella
moelle,35.06,0.00000000000003,ZF_RING_2,Zinc finger, RING-type;
ZF_RING_1,Zinc finger, RING-type, conserved site; no
description,Z,CUFF.16594.1
         (313 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g05660.1                                                       324   8e-89
Glyma10g29040.1                                                        56   6e-08
Glyma20g38280.1                                                        55   9e-08

>Glyma19g05660.1 
          Length = 468

 Score =  324 bits (831), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 180/324 (55%), Positives = 213/324 (65%), Gaps = 16/324 (4%)

Query: 1   MKKCEETSLHSSRRLKKVKRNISCDNEVSTAAGPSRKERKFVKKVVNEMVSDPVIXXXXX 60
           MKK EE+S +SSR  ++ KR+I    E +T A PSRK R+    +V+++V  P I     
Sbjct: 143 MKKHEESSSYSSRLSRRGKRHICNGKENTTVARPSRKGRRLASDLVDKVVLGPSILDLTT 202

Query: 61  XXXXXXXXXXXXHTEAAATSSLSGCVDVNDLQENSSGPDARLCNQNRAMNGSSDGIEQIT 120
                        T+A ATSSLS  V+ N + +NS GP+A L NQ+R + G S+ IEQI 
Sbjct: 203 DDHLFRMDSQ--QTDAEATSSLSVGVNNNIILQNSEGPNAGLSNQSRTIIGGSNDIEQIK 260

Query: 121 DSNQI----------EDPQPVEQTSIDLCSSAG-KFIDGDQVDNVAGSPTSNEWSCVICF 169
           DS+ I          EDP PV QTSIDLCSS   KF DGDQ DNVAG PTS E SCVIC 
Sbjct: 261 DSSHISKPRNSTSFIEDPLPVPQTSIDLCSSDDEKFTDGDQADNVAGLPTSTEMSCVICL 320

Query: 170 EDFSSTLGVLPCEHTFCLTCIQRWAHQRISMGKISTCPLCKASFAWYKIFEHPATADKKL 229
            +FSST G+LPC H FC  CIQ WA    SM K STCPLCKASF   K  EH ATAD+K+
Sbjct: 321 TEFSSTRGILPCGHRFCFPCIQNWADHTTSMRKTSTCPLCKASFMMIKKVEHAATADQKI 380

Query: 230 NSQTVPCDNLASVTYIPMDQELPDNSFEDG---ACVVCRTRGPDDLIETCNVCWTRRIHS 286
            SQT+PCDN ASV +IP+DQ LPDN FE     ACVVCR R P+DL+E+C+VC  R+IHS
Sbjct: 381 YSQTIPCDNSASVIFIPVDQNLPDNIFESAQSNACVVCRGREPEDLLESCDVCHIRKIHS 440

Query: 287 YCMDPPTYPWTCTHCKELRMLYRN 310
           YCMDPP  PW CTHCKELRM YR+
Sbjct: 441 YCMDPPLRPWICTHCKELRMHYRS 464


>Glyma10g29040.1 
          Length = 759

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 20/152 (13%)

Query: 161 NEWSCVICF--EDFSSTLGVLPC-EHTFCLTCIQRWAHQRISMGKISTCPLCKASFAWYK 217
            + +C IC   ED     GVL C  H FC  CI  WA         S CPLCK  F   K
Sbjct: 390 GKQTCGICLSEEDKRRVRGVLNCCTHFFCFACIMEWAKVE------SRCPLCKQRF---K 440

Query: 218 IFEHPATADKKLNSQTVPCD-NLASVTYIPMDQELPD--NSFEDGACVVCRTRGPDDLIE 274
               PA +   ++ + V          Y P ++EL    + +E   C  C   G D L+ 
Sbjct: 441 TISKPARSTTGIDLREVVIQVPERDQVYQPSEEELRSYIDPYEYVMCSECHQGGDDGLML 500

Query: 275 TCNVCWTRRIHSYCM----DPPTYPWTCTHCK 302
            C++C +   H+YC+    + P   W C  C+
Sbjct: 501 LCDICDS-PAHTYCVGLGREVPEGNWYCDGCR 531


>Glyma20g38280.1 
          Length = 794

 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 20/154 (12%)

Query: 159 TSNEWSCVICF--EDFSSTLGVLPC-EHTFCLTCIQRWAHQRISMGKISTCPLCKASFAW 215
           +  + +C IC   ED     GVL C  H FC  CI  WA         S CPLCK  F  
Sbjct: 337 SKGKQTCGICLSEEDKRRVRGVLNCCTHFFCFACIMEWAKVE------SRCPLCKQRF-- 388

Query: 216 YKIFEHPATADKKLNSQTVPCD-NLASVTYIPMDQELPD--NSFEDGACVVCRTRGPDDL 272
            K    PA +   ++ + V          Y P ++EL    + +E   C  C   G D L
Sbjct: 389 -KAISKPARSTTGIDLREVVIQVPERDQVYQPSEEELRSYIDPYEYVICSECHQGGDDGL 447

Query: 273 IETCNVCWTRRIHSYCM----DPPTYPWTCTHCK 302
           +  C++C +   H+YC+    + P   W C  C+
Sbjct: 448 MLLCDICDS-PAHTYCVGLGREVPEGNWYCDGCR 480