Miyakogusa Predicted Gene

Lj0g3v0252459.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0252459.1 Non Chatacterized Hit- tr|I1JG77|I1JG77_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40655
PE,54.7,6e-17,seg,NULL,CUFF.16560.1
         (102 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g32300.1                                                        70   6e-13
Glyma02g31420.1                                                        64   4e-11
Glyma10g21980.1                                                        58   3e-09
Glyma18g07870.1                                                        53   7e-08
Glyma08g45050.1                                                        53   8e-08
Glyma03g29480.1                                                        49   1e-06

>Glyma19g32300.1 
          Length = 121

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 44/71 (61%), Gaps = 5/71 (7%)

Query: 33  DNKEEDIT-CCTPKAKRFRIPEVLTCXXXXXXXXXXXXXXXCSSINRSPIALFASPDIDL 91
            +KE+ I  C TPKAKRFRIPEV TC               CSS  RSPIA FASPDI+L
Sbjct: 55  SSKEQGINGCATPKAKRFRIPEVQTCPPAPKKRRVVPN---CSS-KRSPIAFFASPDIEL 110

Query: 92  FFLSALNNVSV 102
           FF SAL NVS 
Sbjct: 111 FFFSALRNVSA 121


>Glyma02g31420.1 
          Length = 125

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 42/72 (58%), Gaps = 9/72 (12%)

Query: 33  DNKEEDI---TCCTPKAKRFRIPEVLTCXXXXXXXXXXXXXXXCSSIN--RSPIALFASP 87
           D  EEDI    C TPK KRFRIPEVLTC               CSS    RSPIA FASP
Sbjct: 46  DLNEEDICSSVCSTPKGKRFRIPEVLTCPPAPKKRRVTS----CSSSKNKRSPIAFFASP 101

Query: 88  DIDLFFLSALNN 99
           DI+LFF SA+ +
Sbjct: 102 DIELFFFSAIKS 113


>Glyma10g21980.1 
          Length = 123

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 39/74 (52%), Gaps = 7/74 (9%)

Query: 33  DNKEEDI---TCCTPKAKRFRIPEVLTC----XXXXXXXXXXXXXXXCSSINRSPIALFA 85
           D+ EEDI    C TPK KRFRIPEVL C                    S   RS IA FA
Sbjct: 37  DHSEEDICSSVCSTPKGKRFRIPEVLKCPPAPKKRKITTTTTITSSCSSKTKRSSIAFFA 96

Query: 86  SPDIDLFFLSALNN 99
           SPDI+LFF SA+ +
Sbjct: 97  SPDIELFFFSAIKS 110


>Glyma18g07870.1 
          Length = 162

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 7/76 (9%)

Query: 30  EVLD---NKEEDITCCTPKAKRFRIPEVLTCXXXXXXXXXXXXXXXCSSINRSPIALFAS 86
           EV+D   N   +  C TPK ++FRIPE+ TC               CS + RSP++ FA 
Sbjct: 91  EVIDVVCNSNTNSPCSTPKGQKFRIPEISTCPPAPKKPRVLSN---CS-LRRSPLSFFAP 146

Query: 87  PDIDLFFLSALNNVSV 102
           PD++ FF  AL +VSV
Sbjct: 147 PDLEHFFFVALRDVSV 162


>Glyma08g45050.1 
          Length = 185

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 4/62 (6%)

Query: 41  CCTPKAKRFRIPEVLTCXXXXXXXXXXXXXXXCSSINRSPIALFASPDIDLFFLSALNNV 100
           C TPK K+FRIPE+ TC                 S+ RSP++ FA PD++ FF  AL +V
Sbjct: 128 CSTPKGKKFRIPEISTCPPAPKKPRVLSN----CSLRRSPLSFFAPPDLEHFFFVALRDV 183

Query: 101 SV 102
           SV
Sbjct: 184 SV 185


>Glyma03g29480.1 
          Length = 93

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 33/60 (55%), Gaps = 7/60 (11%)

Query: 33 DNKEEDI---TCCTPKAKRFRIPEVLTCXXXXXXXXXXXXXXXCSSINRSPIALFASPDI 89
           ++E D+    C TPKAKRFRIPEVLTC                 S  +SPIA FASPDI
Sbjct: 37 SSQERDVCSSGCATPKAKRFRIPEVLTCPPAPKKRRVMPNY----SSKKSPIAFFASPDI 92