Miyakogusa Predicted Gene

Lj0g3v0252439.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0252439.1 tr|G7I9G8|G7I9G8_MEDTR U4/U6.U5
tri-snRNP-associated protein OS=Medicago truncatula GN=MTR_1g083910
,69.67,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; SQUAMOUS CELL CARCINOMA
ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHO,CUFF.16559.1
         (884 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g24660.1                                                       943   0.0  
Glyma07g34600.1                                                       927   0.0  
Glyma15g29960.2                                                       609   e-174
Glyma15g29960.1                                                       525   e-149
Glyma18g10600.1                                                        97   1e-19

>Glyma08g24660.1 
          Length = 667

 Score =  943 bits (2437), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/669 (72%), Positives = 529/669 (79%), Gaps = 43/669 (6%)

Query: 257 MKETRAKKHSEAASEISSWVSKSRKIQKERALQLSKVFEEQDN----------------- 299
           MKE+R KK  EA SEIS+WV+KSRKI+K+RA QLSK+FEEQ N                 
Sbjct: 1   MKESRTKKQPEADSEISAWVNKSRKIEKKRAFQLSKIFEEQRNFYSLKEHSSVGSRNSSF 60

Query: 300 ----------------------IAVEGSXXXXXXXXXXXXLAGVKVLHGLDKVVEGGTVV 337
                                 + +               LAGVKVLHGLDKV+EGGTVV
Sbjct: 61  LCIFPFISEIIRWLLSIIDPFYLYLLFCEFGLHHIPSSDNLAGVKVLHGLDKVMEGGTVV 120

Query: 338 LTIKDQPILADGDINEDVDMLENVEIGEQKRRDEAYKASKKKPGIYEDKFNDDPSVEKKM 397
           LTIKDQPILADGD+NEDVDMLEN+EIGEQKRRDEAYKA+KKK G+Y+DKF+DDPS EKKM
Sbjct: 121 LTIKDQPILADGDVNEDVDMLENIEIGEQKRRDEAYKAAKKKTGVYDDKFHDDPSTEKKM 180

Query: 398 LPQYDDPTADEGLTLDERGRFTGEAXXXXXXXXXXXTGDSSTNNLEDLTSSGKVSSDYYT 457
           LPQYDDP A+EGLTLD +GRF+GEA           TG  STN  EDLTSSGKVSSDYYT
Sbjct: 181 LPQYDDPAAEEGLTLDGKGRFSGEAEKKLEELRRRLTG-VSTNTFEDLTSSGKVSSDYYT 239

Query: 458 QEEMXXXXXXXXXXXXXXXXXXDINALEAEAISSGLGVGDLGSRKDASRQAIKDEQERLD 517
            EEM                  DINALEAEA+SSGLGVGDLGSRKD  RQAIKDEQERL+
Sbjct: 240 HEEMLKFKKPKKKKSLRKKDKLDINALEAEAVSSGLGVGDLGSRKDVRRQAIKDEQERLE 299

Query: 518 AEMRNNAYQSAYAKADEASKLLLLEQTINVKAEEDETPVFADDDEDLRKSLEKARRLALK 577
           AEMR+NAYQSAYAKADEASKLL LEQT+NVK EEDETPVF DDDEDLRKSLEKARRLALK
Sbjct: 300 AEMRSNAYQSAYAKADEASKLLRLEQTLNVKTEEDETPVFVDDDEDLRKSLEKARRLALK 359

Query: 578 KQEKEVASGPQAVALLATSNHNNEVVDDQ--AGADSRENKVVFTEMEEFVWGLHIDEEAR 635
           K+E E ASGPQA+ALLATSNHNNE  DDQ     +SRENKVVFTEMEEFVWGLHIDEEAR
Sbjct: 360 KKEGEGASGPQAIALLATSNHNNET-DDQNPTAGESRENKVVFTEMEEFVWGLHIDEEAR 418

Query: 636 KPEGEDVFMHDDEVAEVRDEQKSDEAGGWTEVKEASEDEQTKSEDKEEIVPDETIHEVSV 695
           KPE EDVFMHDDE A V DE+K +E GGWTEV+E SEDEQ  +EDKEEI+PDETIHEV+V
Sbjct: 419 KPESEDVFMHDDEEANVPDEEKINEVGGWTEVQETSEDEQRNTEDKEEIIPDETIHEVAV 478

Query: 696 XXXXXXXXXXXXDRGSLKESIEWGGRNMDKKKSKLVGIVDDEGKDAQNKKEIRIERTDEF 755
                       +RG+LKESIEWGGRNMDKKKSKLVGIVDDE K+AQ  +EIRIERTDEF
Sbjct: 479 GKGLSGALKLLKERGTLKESIEWGGRNMDKKKSKLVGIVDDEEKEAQKTREIRIERTDEF 538

Query: 756 GRILTPKEAFRLISHKFHGKGPGKMKQEKRMKQYHEELRMKQMKSSDTPSLSVERMREAQ 815
           GRILTPKEAFR+ISHKFHGKGPGKMKQEKRMKQY+EEL+MKQMKSSDTPSLSVERMREAQ
Sbjct: 539 GRILTPKEAFRMISHKFHGKGPGKMKQEKRMKQYYEELKMKQMKSSDTPSLSVERMREAQ 598

Query: 816 VRSKTPYIVLSGNVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKAEPSS 875
            R +TPY+VLSG+VKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKAEPSS
Sbjct: 599 ARLQTPYLVLSGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKAEPSS 658

Query: 876 ANTPKKAKS 884
           ++TPKK KS
Sbjct: 659 SDTPKKPKS 667


>Glyma07g34600.1 
          Length = 688

 Score =  927 bits (2396), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/662 (73%), Positives = 525/662 (79%), Gaps = 39/662 (5%)

Query: 256 KMKETRAKKHSEAASEISSWVSKSRKIQKERALQLSKVFEEQ------------------ 297
           K  E+R KK  EA SEIS+WV+KSRKI+K+RA QLSK+FEEQ                  
Sbjct: 33  KASESRTKKQPEADSEISTWVNKSRKIEKKRAFQLSKIFEEQLFLCIVRLVSMFGGTHSI 92

Query: 298 -------------DNIAVEGSXXXXXXXXXXXXLAGVKVLHGLDKVVEGGTVVLTIKDQP 344
                         N  VEG             LAGVKVLHGLDKV+EGGTVVLTIKDQP
Sbjct: 93  DWMICWHIQAVKVKNYIVEG--FEIHITLEKYNLAGVKVLHGLDKVMEGGTVVLTIKDQP 150

Query: 345 ILADGDINEDVDMLENVEIGEQKRRDEAYKASKKKPGIYEDKFNDDPSVEKKMLPQYDDP 404
           ILADGD+NEDVDMLEN+EIGEQKRRDEAYKA+KKK G+Y+DKF DDPS EKKML QYDDP
Sbjct: 151 ILADGDVNEDVDMLENIEIGEQKRRDEAYKAAKKKTGVYDDKFTDDPSTEKKMLQQYDDP 210

Query: 405 TADEGLTLDERGRFTGEAXXXXXXXXXXXTGDSSTNNLEDLTSSGKVSSDYYTQEEMXXX 464
            A+EGLTLDE+GRF+GEA           TG  STN  EDLTSSGKVSSDYYT EEM   
Sbjct: 211 AAEEGLTLDEKGRFSGEAEKKLEELRRRLTG-VSTNTFEDLTSSGKVSSDYYTHEEMLKF 269

Query: 465 XXXXXXXXXXXXXXXDINALEAEAISSGLGVGDLGSRKDASRQAIKDEQERLDAEMRNNA 524
                          DINALEAEA+SSGLGVGDLGSRKD  RQAIKDEQERL+AE R+NA
Sbjct: 270 KKPKKKKSLRKKDRLDINALEAEAVSSGLGVGDLGSRKDVRRQAIKDEQERLEAETRSNA 329

Query: 525 YQSAYAKADEASKLLLLEQTINVKAEEDETPVFADDDEDLRKSLEKARRLALKKQEKEVA 584
           YQSAYAKADEASKLL LEQT+NVK EEDETPVF DDDEDL KSLEKARRLALKK E E A
Sbjct: 330 YQSAYAKADEASKLLRLEQTLNVK-EEDETPVFVDDDEDLCKSLEKARRLALKK-EGEGA 387

Query: 585 SGPQAVALLATSNHNNEVVDDQ--AGADSRENKVVFTEMEEFVWGLHIDEEARKPEGEDV 642
           SGPQA+ALLATSNHNNE  DDQ     +SRENKVVFTEMEEFVWGLHIDEEARKPE EDV
Sbjct: 388 SGPQAIALLATSNHNNET-DDQNPTAGESRENKVVFTEMEEFVWGLHIDEEARKPESEDV 446

Query: 643 FMHDDEVAEVRDEQKSDEAGGWTEVKEASEDEQTKSEDKEEIVPDETIHEVSVXXXXXXX 702
           FMHDDE   V DE+ S+EAGGWTEV+E +EDEQ  +EDKEEIVPDETIHEV+V       
Sbjct: 447 FMHDDEETNVPDEENSNEAGGWTEVQETNEDEQHNTEDKEEIVPDETIHEVAVGKGLSGA 506

Query: 703 XXXXXDRGSLKESIEWGGRNMDKKKSKLVGIVDDEGKDAQNKKEIRIERTDEFGRILTPK 762
                +RG+LKESIEWGGR+MDKKKSKLVGIVDDE K+AQ  +EIRIERTDEFGRILTPK
Sbjct: 507 LKLLKERGTLKESIEWGGRSMDKKKSKLVGIVDDEEKEAQKTREIRIERTDEFGRILTPK 566

Query: 763 EAFRLISHKFHGKGPGKMKQEKRMKQYHEELRMKQMKSSDTPSLSVERMREAQVRSKTPY 822
           EAFR+ISHKFHGKGPGKMKQEKRMKQYHEEL+MKQMKSSDTPSLSVERMREAQ R +TPY
Sbjct: 567 EAFRMISHKFHGKGPGKMKQEKRMKQYHEELKMKQMKSSDTPSLSVERMREAQARLQTPY 626

Query: 823 IVLSGNVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKAEPSSANTPKKA 882
           +VLSG+VKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKAEPSS++TPKK 
Sbjct: 627 LVLSGHVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKAEPSSSDTPKKP 686

Query: 883 KS 884
           KS
Sbjct: 687 KS 688


>Glyma15g29960.2 
          Length = 479

 Score =  609 bits (1571), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 338/506 (66%), Positives = 372/506 (73%), Gaps = 32/506 (6%)

Query: 318 LAGVKVLHGLDKVVEGGTVVLTIKDQPILADGDINEDVDMLENVEIGEQKRRDEAYKASK 377
           LAGVKVLHGLDKV+EGGTVVLTIKDQPILA+GD+NEDVDMLEN+EIGEQKRRDEAYKA+K
Sbjct: 3   LAGVKVLHGLDKVMEGGTVVLTIKDQPILANGDVNEDVDMLENIEIGEQKRRDEAYKAAK 62

Query: 378 KK-PGIYEDKFNDDPSVEKKMLPQYDDPTADEGLTLDERGRFTGEAXXXXXXXXXXXTGD 436
           KK  GIY+DKFNDD S EKKMLPQYDDP A+EGLTLDE+GRF+GEA           TG 
Sbjct: 63  KKKTGIYDDKFNDDLSTEKKMLPQYDDPVAEEGLTLDEKGRFSGEAEKKIEELRRRLTG- 121

Query: 437 SSTNNLEDLTSSGKVSSDYYTQEEMXXXXXXXXXXXXXXXXXXDINALEAEAISSGLGVG 496
            STN  EDLT+SGKVSSDYYT EEM                  DINALE E +SSGL V 
Sbjct: 122 VSTNTFEDLTASGKVSSDYYTHEEMLKFKKPKKKKSLRKKYKLDINALEVETVSSGLSVS 181

Query: 497 DLGSRKDASRQAIKDEQERLDAEMRNNAYQSAYAKADEASKLLLLEQTINVKAEEDETPV 556
           DLGSRKD  RQAIKDEQERL+AEMR+NAYQSAYAKADEASKLL LEQT+NVK EEDETPV
Sbjct: 182 DLGSRKDVRRQAIKDEQERLEAEMRSNAYQSAYAKADEASKLLRLEQTLNVKTEEDETPV 241

Query: 557 FADDDEDLRKSLEKARRLALKKQEKEVASGPQAVALLATSNHNNEVVDDQ--AGADSREN 614
           F DDDEDLRKSLEKARRLALKK E E AS PQA+ALLATSNHNNE  DDQ     +SREN
Sbjct: 242 FVDDDEDLRKSLEKARRLALKK-EGEGASCPQAIALLATSNHNNET-DDQNPTAGESREN 299

Query: 615 KVVFTEMEEFVWGLHIDEEARKPEGEDVFMHDDEVAEVRDEQKSDEAGGWTEVKEASEDE 674
           KVVFTEMEEFVW LHIDEEARKPE EDVFMHDDE A V DE+KS+EAGGWT V+E +EDE
Sbjct: 300 KVVFTEMEEFVWSLHIDEEARKPESEDVFMHDDEEANVPDEEKSNEAGGWTGVQETNEDE 359

Query: 675 QTKSEDKEEIVPDETIHEVSVXXXXXXXXXXXXDRGSLKESIEWGGRNMDKKKSKLVGIV 734
           Q  +E+KEEI       +  +               S  ++  W     ++     V I+
Sbjct: 360 QRNTENKEEI-------KYLILWRVHRILECEFRSNSTSKTSSW-----EQNVCGFVCII 407

Query: 735 DDEGKDAQNKKEIRIERTDEFGRILTPKEAFRLISHKFHGKGPGKMKQEKRMKQYHEELR 794
                       I I    E  R+    EAFR+ISHKFHGKGPGKMKQEKRMKQYHEEL+
Sbjct: 408 ------------IIIFNGAE--RLSLVLEAFRMISHKFHGKGPGKMKQEKRMKQYHEELK 453

Query: 795 MKQMKSSDTPSLSVERMREAQVRSKT 820
           MKQ+KS DTPSLSVERMRE Q R +T
Sbjct: 454 MKQIKSLDTPSLSVERMREVQARLQT 479


>Glyma15g29960.1 
          Length = 817

 Score =  525 bits (1352), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 280/370 (75%), Positives = 302/370 (81%), Gaps = 6/370 (1%)

Query: 318 LAGVKVLHGLDKVVEGGTVVLTIKDQPILADGDINEDVDMLENVEIGEQKRRDEAYKASK 377
           LAGVKVLHGLDKV+EGGTVVLTIKDQPILA+GD+NEDVDMLEN+EIGEQKRRDEAYKA+K
Sbjct: 450 LAGVKVLHGLDKVMEGGTVVLTIKDQPILANGDVNEDVDMLENIEIGEQKRRDEAYKAAK 509

Query: 378 KK-PGIYEDKFNDDPSVEKKMLPQYDDPTADEGLTLDERGRFTGEAXXXXXXXXXXXTGD 436
           KK  GIY+DKFNDD S EKKMLPQYDDP A+EGLTLDE+GRF+GEA           TG 
Sbjct: 510 KKKTGIYDDKFNDDLSTEKKMLPQYDDPVAEEGLTLDEKGRFSGEAEKKIEELRRRLTG- 568

Query: 437 SSTNNLEDLTSSGKVSSDYYTQEEMXXXXXXXXXXXXXXXXXXDINALEAEAISSGLGVG 496
            STN  EDLT+SGKVSSDYYT EEM                  DINALE E +SSGL V 
Sbjct: 569 VSTNTFEDLTASGKVSSDYYTHEEMLKFKKPKKKKSLRKKYKLDINALEVETVSSGLSVS 628

Query: 497 DLGSRKDASRQAIKDEQERLDAEMRNNAYQSAYAKADEASKLLLLEQTINVKAEEDETPV 556
           DLGSRKD  RQAIKDEQERL+AEMR+NAYQSAYAKADEASKLL LEQT+NVK EEDETPV
Sbjct: 629 DLGSRKDVRRQAIKDEQERLEAEMRSNAYQSAYAKADEASKLLRLEQTLNVKTEEDETPV 688

Query: 557 FADDDEDLRKSLEKARRLALKKQEKEVASGPQAVALLATSNHNNEVVDDQ--AGADSREN 614
           F DDDEDLRKSLEKARRLALKK E E AS PQA+ALLATSNHNNE  DDQ     +SREN
Sbjct: 689 FVDDDEDLRKSLEKARRLALKK-EGEGASCPQAIALLATSNHNNET-DDQNPTAGESREN 746

Query: 615 KVVFTEMEEFVWGLHIDEEARKPEGEDVFMHDDEVAEVRDEQKSDEAGGWTEVKEASEDE 674
           KVVFTEMEEFVW LHIDEEARKPE EDVFMHDDE A V DE+KS+EAGGWT V+E +EDE
Sbjct: 747 KVVFTEMEEFVWSLHIDEEARKPESEDVFMHDDEEANVPDEEKSNEAGGWTGVQETNEDE 806

Query: 675 QTKSEDKEEI 684
           Q  +E+KEEI
Sbjct: 807 QRNTENKEEI 816


>Glyma18g10600.1 
          Length = 49

 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/49 (91%), Positives = 48/49 (97%)

Query: 836 DPKSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKAEPSSANTPKKAKS 884
           +PKSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKAEPSS++TPKK KS
Sbjct: 1   NPKSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKAEPSSSDTPKKPKS 49