Miyakogusa Predicted Gene
- Lj0g3v0252309.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0252309.1 Non Chatacterized Hit- tr|J3MCE6|J3MCE6_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB06G1,40.18,4e-19,no
description,Cupredoxin; Cu_bind_like,Plastocyanin-like;
PHYTOCYANIN,Plastocyanin-like; Cupredoxin,CUFF.16547.1
(150 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g04000.1 213 6e-56
Glyma04g03900.1 211 3e-55
Glyma02g15230.1 126 9e-30
Glyma07g33210.1 120 5e-28
Glyma20g01290.1 110 5e-25
Glyma07g29430.1 110 7e-25
Glyma07g29410.1 110 7e-25
Glyma07g29400.1 108 1e-24
>Glyma06g04000.1
Length = 143
Score = 213 bits (542), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 104/148 (70%), Positives = 120/148 (81%), Gaps = 8/148 (5%)
Query: 1 MDTTCSHTARVFGQGVVIFLVIMSLAAGSDGRSITVGDSHGWSAGTNYTQWATKNSPFHI 60
MD T R+ QGV +FLVI + A S+ R+I VGDS GW AGTNYTQWA +NSPFHI
Sbjct: 1 MDAT-----RILAQGVFVFLVITCVGAESEPRTILVGDSQGWQAGTNYTQWAIQNSPFHI 55
Query: 61 NDTLVFKYPLPGNST-IAQSVYMLPNLWSYTTCQFRGAKLLGSAAQGAGEGLKVELNQSR 119
NDTL+FKYP GNST +AQSVY+LPN WSY TC+FRGAKLLG+A +G GEG KVELNQ +
Sbjct: 56 NDTLLFKYP--GNSTTLAQSVYLLPNQWSYITCEFRGAKLLGNATEGDGEGFKVELNQLK 113
Query: 120 PYYFASAEGNAYDCIAGLTKFIAVPSST 147
PYYFASAEGN YDCIAGL+KFIAVPS++
Sbjct: 114 PYYFASAEGNFYDCIAGLSKFIAVPSTS 141
>Glyma04g03900.1
Length = 145
Score = 211 bits (536), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/148 (70%), Positives = 118/148 (79%), Gaps = 8/148 (5%)
Query: 1 MDTTCSHTARVFGQGVVIFLVIMSLAAGSDGRSITVGDSHGWSAGTNYTQWATKNSPFHI 60
MD T R+ QGV +FLVI + A + R+I VGDS GW AGTNYTQWA +NSPFHI
Sbjct: 1 MDAT-----RILAQGVFVFLVITYVGAEREPRTILVGDSQGWQAGTNYTQWAIQNSPFHI 55
Query: 61 NDTLVFKYPLPGNST-IAQSVYMLPNLWSYTTCQFRGAKLLGSAAQGAGEGLKVELNQSR 119
NDTLVFKYP GNST +AQSVY+LPN WSY TC+FRGAKLLG+A +G GEG KVELNQ
Sbjct: 56 NDTLVFKYP--GNSTTLAQSVYLLPNQWSYITCEFRGAKLLGNATEGDGEGFKVELNQLT 113
Query: 120 PYYFASAEGNAYDCIAGLTKFIAVPSST 147
PYYFASAEGN YDCIAGL+KFIAVPS++
Sbjct: 114 PYYFASAEGNFYDCIAGLSKFIAVPSTS 141
>Glyma02g15230.1
Length = 150
Score = 126 bits (316), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 72/115 (62%)
Query: 30 DGRSITVGDSHGWSAGTNYTQWATKNSPFHINDTLVFKYPLPGNSTIAQSVYMLPNLWSY 89
+ R I VG S GW G NYT WA KN PF++NDTLVFKY P ++ SVY+ PNLWS+
Sbjct: 30 EPRKIIVGGSEGWHFGFNYTDWAFKNGPFYLNDTLVFKYDAPNATSFPHSVYIFPNLWSF 89
Query: 90 TTCQFRGAKLLGSAAQGAGEGLKVELNQSRPYYFASAEGNAYDCIAGLTKFIAVP 144
C + AK+L + QG GEG LN+ +PY+FA E N + C +G KF +P
Sbjct: 90 LNCDVKSAKMLANPTQGGGEGFHFVLNRWQPYFFACGERNGFHCNSGQMKFAVMP 144
>Glyma07g33210.1
Length = 139
Score = 120 bits (301), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
Query: 20 LVIMSLAAGSDGRSITVGDSHGWSAGTNYTQWATKNSPFHINDTLVFKYPLPGNSTIAQS 79
LV+ +L G R I VG S W G NYT WA N PF+ NDTLVFKY P ++ S
Sbjct: 8 LVLTTLIGGP--REIIVGGSEHWHFGYNYTNWAINNGPFYFNDTLVFKYDAPNATSFPHS 65
Query: 80 VYMLPNLWSYTTCQFRGAKLLGSAAQGAGEGLKVELNQSRPYYFASAEGNAYDCIAGLTK 139
VY+L N WS+ C + AK+L + QGA EG K L + +PYYFA E N + C G K
Sbjct: 66 VYLLANFWSFLNCDVKKAKMLANPKQGAEEGFKFVLKKWQPYYFACGERNGFHCNNGQMK 125
Query: 140 FIAVP 144
F +P
Sbjct: 126 FAVIP 130
>Glyma20g01290.1
Length = 176
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 67/113 (59%)
Query: 32 RSITVGDSHGWSAGTNYTQWATKNSPFHINDTLVFKYPLPGNSTIAQSVYMLPNLWSYTT 91
R I VG S W G NYT WA K +PF++NDTLVFKY P ++ SVYM + S+
Sbjct: 55 RQILVGGSEHWHYGFNYTDWAFKTAPFYLNDTLVFKYDAPNATSFPHSVYMFKSFGSFLK 114
Query: 92 CQFRGAKLLGSAAQGAGEGLKVELNQSRPYYFASAEGNAYDCIAGLTKFIAVP 144
C + AK+L + QG+GEG K L + +P+YFA E N + C G KF +P
Sbjct: 115 CDIKKAKMLANPTQGSGEGFKFVLKKWQPHYFACGERNGFHCNNGTMKFAVMP 167
>Glyma07g29430.1
Length = 160
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 67/116 (57%)
Query: 29 SDGRSITVGDSHGWSAGTNYTQWATKNSPFHINDTLVFKYPLPGNSTIAQSVYMLPNLWS 88
+D I VG S W G NYT WA N+PF++NDTLVFKY P ++ SVYM + S
Sbjct: 36 TDWWQILVGGSEHWHYGFNYTDWAFNNAPFYLNDTLVFKYDAPNPTSFPHSVYMFKSFGS 95
Query: 89 YTTCQFRGAKLLGSAAQGAGEGLKVELNQSRPYYFASAEGNAYDCIAGLTKFIAVP 144
+ C + AK+L + QG GEG K L + +P+YFA E N + C G KF +P
Sbjct: 96 FLKCDIKKAKMLANPTQGTGEGFKFVLKRWQPHYFACGERNGFHCNNGTMKFAVMP 151
>Glyma07g29410.1
Length = 176
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 66/113 (58%)
Query: 32 RSITVGDSHGWSAGTNYTQWATKNSPFHINDTLVFKYPLPGNSTIAQSVYMLPNLWSYTT 91
R I VG S W G NYT WA KN+PF++NDTLVFKY P ++ SVYM+ + S+
Sbjct: 55 RQILVGGSEHWHYGFNYTDWAFKNAPFYLNDTLVFKYDAPNATSFPHSVYMIKSFGSFMK 114
Query: 92 CQFRGAKLLGSAAQGAGEGLKVELNQSRPYYFASAEGNAYDCIAGLTKFIAVP 144
C AK+L + QG GE K L + +P+YFA E N + C G KF +P
Sbjct: 115 CDIEKAKMLANPTQGTGESFKFVLKRWQPHYFACGERNGFHCNNGTMKFAVMP 167
>Glyma07g29400.1
Length = 176
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%)
Query: 32 RSITVGDSHGWSAGTNYTQWATKNSPFHINDTLVFKYPLPGNSTIAQSVYMLPNLWSYTT 91
+ I VG S W G NYT WA K++PF++NDTLVFKY P ++ SVYM + S+
Sbjct: 55 KQIVVGGSEHWHYGFNYTDWAFKSAPFYLNDTLVFKYDAPNATSFPHSVYMFKSFGSFLK 114
Query: 92 CQFRGAKLLGSAAQGAGEGLKVELNQSRPYYFASAEGNAYDCIAGLTKFIAVP 144
C AK+L + QG GEG K L + +P+YFA E N + C G KF +P
Sbjct: 115 CDIEKAKMLANPMQGTGEGFKFVLKRWKPHYFACGERNGFHCNNGTMKFAVMP 167