Miyakogusa Predicted Gene

Lj0g3v0252129.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0252129.1 Non Chatacterized Hit- tr|K4BS36|K4BS36_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,41.86,2e-18,ZF_PHD_1,Zinc finger, PHD-type, conserved
site,CUFF.16532.1
         (294 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g39280.1                                                       258   4e-69
Glyma09g23090.1                                                       116   2e-26
Glyma06g33590.1                                                       115   4e-26
Glyma20g30510.1                                                        95   8e-20
Glyma10g37140.1                                                        87   2e-17
Glyma10g37140.2                                                        87   2e-17
Glyma10g37130.1                                                        83   3e-16
Glyma12g01750.2                                                        71   1e-12

>Glyma04g39280.1 
          Length = 265

 Score =  258 bits (660), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 144/271 (53%), Positives = 177/271 (65%), Gaps = 40/271 (14%)

Query: 17  LMFCVMCKACAVH--SYCPDKFHTEDDGTVSWKCEDCAPDNPK-CL-SEQLRKSERISDA 72
           L  C MC + +++  SYC DKFHTEDDGT+ W+CEDCAP+ PK C  +E LR++      
Sbjct: 8   LDICKMCSSDSLYVCSYCLDKFHTEDDGTLIWRCEDCAPNYPKKCFHAECLRRN------ 61

Query: 73  TEAKYNRMKMQKESCAPRKLKSVRFAEDNENRQPILEDEIVPYEEPESHKVPLSTSPNEQ 132
                                      D E RQPILED+ + Y+EPES K PL+TS ++Q
Sbjct: 62  ---------------------------DIEKRQPILEDKNILYKEPESPKGPLNTSSDKQ 94

Query: 133 VLESEKYGDSESIISKCMCCPEIDKYSHARPLCDPVWKGQLRLNNGTRFLLAAYMSSKAC 192
            LE EKY   E++ +  +  PE D++S A PL DPVW GQ  LN  T F L AY SSKAC
Sbjct: 95  ALEHEKY---EALTTPHLKYPEFDQHSRAHPLSDPVWTGQFILNKATDFGLVAYASSKAC 151

Query: 193 SKVHSAVTGVPKRLDAEMLLRCVIWPKSFAMFPSNADSIALYLFPRYERDEKIFDGVLHN 252
           SKV SAVT +P  LD E+L R  IWPKSF MFP N+D+I LY FP YERDE  FD VL++
Sbjct: 152 SKVLSAVTVLPTLLDVEILSRFAIWPKSFDMFPPNSDNIGLYFFPLYERDELSFDRVLND 211

Query: 253 VIEQDLALRAVVNNVELLIFSSHLLPPDDRR 283
           +IEQ+ AL+AV+NNVELLIFSSHLLPP+DRR
Sbjct: 212 IIEQEFALKAVINNVELLIFSSHLLPPNDRR 242


>Glyma09g23090.1 
          Length = 302

 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 145/295 (49%), Gaps = 32/295 (10%)

Query: 4   ICLICGDEGDVKRLMFCVMCKACAVHSYCPDK--FHTEDDGTVSWKCEDCAPDNPKCLSE 61
           +CL CG+ G  + L+FC  C+  A+H YC D     T+D   V+W CEDC     K  S 
Sbjct: 7   VCLQCGNAGFPETLVFCNKCQVYALHRYCLDGPVIFTDD---VTWFCEDC---EAKVTSF 60

Query: 62  Q-----LRKSERISDATEAKYNRMKMQKESCAPRKLKSVRFAEDNENRQPILEDEIVPYE 116
                 L   ++IS  +    ++ +++ +SC    ++SV+  ++ +N   I+   +V   
Sbjct: 61  HDSCTLLPSGKKISLNSGNDASQARIEPKSC----IESVKNKQEPQN---IIAKTMVLLS 113

Query: 117 EPES---HKVP--LSTSPNEQVLESEKYGDSESIISKCMCCPEIDKYSHARPLCDPVWKG 171
           +  S   H +   ++ +  E   E E   D +   +          Y    P+ DPVW+G
Sbjct: 114 DNHSLSHHGLSQCINNAEKENKFEKEFQPDPKDEANTSESLNATVPY----PIADPVWRG 169

Query: 172 QLRLNN---GTRFLLAAYMSSKACSKVHSAVTGVPKRLDAEMLLRCVIWPKSFAMFPSNA 228
            LR+++   GT   L A++S+ A  KV       P  L  ++  R  +WPKSF     N 
Sbjct: 170 SLRISDPSFGTVIGLLAHVSTLASPKVLEETRFFPDVLCPDLRPRTAVWPKSFMKCGPNM 229

Query: 229 DSIALYLFPRYERDEKIFDGVLHNVIEQDLALRAVVNNVELLIFSSHLLPPDDRR 283
           DSIALY FP  ER E+ F  ++ +++  DL+LR  V N ELLIF S LLP   RR
Sbjct: 230 DSIALYFFPDSERVERAFHKLVEDMMYFDLSLRTEVENAELLIFPSILLPIQCRR 284


>Glyma06g33590.1 
          Length = 302

 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 146/306 (47%), Gaps = 32/306 (10%)

Query: 4   ICLICGDEGDVKRLMFCVMCKACAVHSYCPDK--FHTEDDGTVSWKCEDCAPDNPKCLSE 61
           +CL CG+ G  + L+FC  C+  A H YC D     T+D   V+W CEDC     K  S 
Sbjct: 7   VCLQCGNAGFPETLVFCNKCQVYARHRYCLDGPVIFTDD---VTWFCEDC---EAKVTSF 60

Query: 62  Q-----LRKSERISDATEAKYNRMKMQKESCAPRKLKSVRFAEDNENRQPILEDEIVPYE 116
                 L   + IS  +    ++ +++ +SC    ++SV+  ++ +N   I+   +V   
Sbjct: 61  HDSCTLLPSGKNISLNSGNDASQARIEPKSC----IESVKNKQEPQN---IIAKTMVLLS 113

Query: 117 EPES---HKVP--LSTSPNEQVLESEKYGDSESIISKCMCCPEIDKYSHARPLCDPVWKG 171
           +  S   H +   ++ +  E   E E   D +   +          Y    P+ DPVW+G
Sbjct: 114 DNHSLSHHGLSQCINNAEKENKFEKEFQPDPKDEANTSESLNATVPY----PIADPVWRG 169

Query: 172 QLRLNN---GTRFLLAAYMSSKACSKVHSAVTGVPKRLDAEMLLRCVIWPKSFAMFPSNA 228
            LR+++   GT   L A++S+ A  KV       P  L  ++  R  +WPKSF     N 
Sbjct: 170 SLRISDPSFGTVIGLLAHVSTLASPKVLEETRFFPDVLCPDLRPRTAVWPKSFMKCGPNM 229

Query: 229 DSIALYLFPRYERDEKIFDGVLHNVIEQDLALRAVVNNVELLIFSSHLLPPDDRRKLRNL 288
           DSIALY FP  ER E+ F  ++ +++  DL+LR  V N ELLIF S LLP   RR L   
Sbjct: 230 DSIALYFFPDSERVERAFHKLVEDMMYFDLSLRTEVENAELLIFPSILLPIQCRRFLEKY 289

Query: 289 WFCCKF 294
           +    F
Sbjct: 290 YLWGVF 295


>Glyma20g30510.1 
          Length = 318

 Score = 95.1 bits (235), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 3/130 (2%)

Query: 152 CPEIDKYSHARPLCDPVWKGQLRL---NNGTRFLLAAYMSSKACSKVHSAVTGVPKRLDA 208
           C E+D Y +A+P  +P+W+G +      NGT   L A+MS  ACSKV       P+ L A
Sbjct: 184 CVELDGYVYAQPTINPIWRGSMYFCNETNGTVNGLLAHMSDLACSKVVEETGHFPEVLHA 243

Query: 209 EMLLRCVIWPKSFAMFPSNADSIALYLFPRYERDEKIFDGVLHNVIEQDLALRAVVNNVE 268
           E+L R  +WP+SF         IAL++FP  E  EK FD V+ +++  + A++ V    E
Sbjct: 244 ELLPRDKVWPESFKSRRPTDQDIALFIFPDGEGSEKDFDKVVEDIMIHEHAIKIVAKKAE 303

Query: 269 LLIFSSHLLP 278
           LLIF S  LP
Sbjct: 304 LLIFHSIELP 313


>Glyma10g37140.1 
          Length = 338

 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 3/135 (2%)

Query: 152 CPEIDKYSHARPLCDPVWKGQLRLNNGT-RFL--LAAYMSSKACSKVHSAVTGVPKRLDA 208
           C E+D + +A+P  DP+W+G +   NGT R +  L A++S+ ACS+V       P+ L A
Sbjct: 183 CVEVDGHVYAQPTIDPIWRGSMYFCNGTIRTVSGLLAHISNLACSQVAEETGHFPEVLHA 242

Query: 209 EMLLRCVIWPKSFAMFPSNADSIALYLFPRYERDEKIFDGVLHNVIEQDLALRAVVNNVE 268
           E L R  +W +SF         IAL+ FP  E  EK FD ++ +++     +R V  N E
Sbjct: 243 EFLPRDKVWAESFKRGDPTDQDIALFFFPDSEGSEKDFDVLVEDIMICKHVIRFVGKNAE 302

Query: 269 LLIFSSHLLPPDDRR 283
           LLIF S  LP  + R
Sbjct: 303 LLIFPSTELPVQNWR 317



 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 1  MSNICLICGDEGDVKRLMFCVMCKACAVHSYCPDKFHTEDDGTVSWKCEDCA 52
          M  +CL CGD G  + L+FC  C A A+H YC        D  V+W CEDCA
Sbjct: 1  METVCLHCGDRGFPETLVFCTECMAYALHRYCLKGLVNFTD-AVTWFCEDCA 51


>Glyma10g37140.2 
          Length = 309

 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 3/135 (2%)

Query: 152 CPEIDKYSHARPLCDPVWKGQLRLNNGT-RFL--LAAYMSSKACSKVHSAVTGVPKRLDA 208
           C E+D + +A+P  DP+W+G +   NGT R +  L A++S+ ACS+V       P+ L A
Sbjct: 154 CVEVDGHVYAQPTIDPIWRGSMYFCNGTIRTVSGLLAHISNLACSQVAEETGHFPEVLHA 213

Query: 209 EMLLRCVIWPKSFAMFPSNADSIALYLFPRYERDEKIFDGVLHNVIEQDLALRAVVNNVE 268
           E L R  +W +SF         IAL+ FP  E  EK FD ++ +++     +R V  N E
Sbjct: 214 EFLPRDKVWAESFKRGDPTDQDIALFFFPDSEGSEKDFDVLVEDIMICKHVIRFVGKNAE 273

Query: 269 LLIFSSHLLPPDDRR 283
           LLIF S  LP  + R
Sbjct: 274 LLIFPSTELPVQNWR 288


>Glyma10g37130.1 
          Length = 374

 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 15/142 (10%)

Query: 152 CPEIDKYSHARPLCDPVWK------------GQLRL---NNGTRFLLAAYMSSKACSKVH 196
           C E+D + +A P  DP+W+            G +      NGT   + A+MS+ ACSKV 
Sbjct: 201 CVELDGHVYAHPTIDPIWRYINCFANFIGNWGSMYFCNETNGTVNGVLAHMSNLACSKVA 260

Query: 197 SAVTGVPKRLDAEMLLRCVIWPKSFAMFPSNADSIALYLFPRYERDEKIFDGVLHNVIEQ 256
                 P+ L AE+L R  +WP+SF         IAL++FP  E  EK FD ++ +++  
Sbjct: 261 EETGHFPEVLHAELLPRDKVWPESFKSRRPTDQDIALFIFPDTEGSEKDFDKLVEDIMIN 320

Query: 257 DLALRAVVNNVELLIFSSHLLP 278
           +  +R V    ELLIF S  LP
Sbjct: 321 EHVIRIVAKKAELLIFHSIELP 342


>Glyma12g01750.2 
          Length = 1195

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 16/146 (10%)

Query: 144 SIISKCMCCPEIDKYSHARPLCDPVWKGQLRLN-NGT----RFLLAAYMSSKACSKVHSA 198
           SI+SK    PE +        C  +W+G   ++ NG        + A++S+ A  KVH  
Sbjct: 612 SILSKMSVIPEYE--------C--IWQGVFVVHRNGMPPDLYTGIQAHLSACASPKVHEV 661

Query: 199 VTGVPKRLDAEMLLRCVIWPKSFAMFPSNADSIALYLFPR-YERDEKIFDGVLHNVIEQD 257
           V      +    + R  +WP  F    +  D+IALY F R  E  E+ + G+L ++I  D
Sbjct: 662 VKKFLPEVSLNEVSRLSVWPSQFHQGGAKEDNIALYFFARDIESYERYYKGLLDHMIRND 721

Query: 258 LALRAVVNNVELLIFSSHLLPPDDRR 283
           LALR   + VELLIF+S+ L  D +R
Sbjct: 722 LALRGTFDGVELLIFASNQLLEDSQR 747