Miyakogusa Predicted Gene

Lj0g3v0251809.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0251809.1 tr|I0YP46|I0YP46_9CHLO SMAD/FHA domain-containing
protein OS=Coccomyxa subellipsoidea C-169 PE=4 SV=,39.1,2e-17,SMAD/FHA
domain,SMAD/FHA domain; seg,NULL; NUCLEAR INHIBITOR OF PROTEIN
PHOSPHATASE-1,NULL; Forkhead,CUFF.16504.1
         (226 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g05520.1                                                       284   4e-77
Glyma11g05960.1                                                        49   5e-06

>Glyma20g05520.1 
          Length = 222

 Score =  284 bits (727), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 162/233 (69%), Positives = 175/233 (75%), Gaps = 18/233 (7%)

Query: 1   MESIVVQSLSLAKIPKSQACSASVLNSS---HSNATSVTFSSVT--HHHLPKCFIFRLPG 55
           MESI  QSLSLAKIPKSQ  ++ +LNS    HSNATSV FSSV   HHHL KCF+FR   
Sbjct: 1   MESIFFQSLSLAKIPKSQ--TSPLLNSPLLFHSNATSVAFSSVPYHHHHLLKCFLFRS-- 56

Query: 56  GVRLKAKGKVNLGAI--NXXXXXXXXXXXXXRWLLEPVGDGDTRHIGFKVDMPGAYEIAS 113
               KA  K NL  +                RWLLEPVGDGDTRHIGFKV+MPG YEIAS
Sbjct: 57  ----KANEKQNLVGVLRASEAATTPTTNDAERWLLEPVGDGDTRHIGFKVEMPGPYEIAS 112

Query: 114 SVVTVGRVPEKADLVIPVATVSGVHARIQKKPGKLLVTDLDSTNGTFIDDKRLRPGVISP 173
           S VTVGRVP+KADLVIPVATVSGVHARIQKK G LLVTDLDSTNGTFI+DKRLRPGV++ 
Sbjct: 113 SEVTVGRVPDKADLVIPVATVSGVHARIQKKQGNLLVTDLDSTNGTFINDKRLRPGVVAT 172

Query: 174 VSSGSLVTFGDTHLAMFRVSKVGDVKAADSDTAEETEGELDPDNKSDGNTETS 226
           +S GS +TFGDTHLAMFRVSKV DVK A  DT  ETE ELD DNKSD +TETS
Sbjct: 173 ISPGSCITFGDTHLAMFRVSKVEDVKPA--DTVGETEIELDTDNKSD-DTETS 222


>Glyma11g05960.1 
          Length = 654

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 22/134 (16%)

Query: 86  WLLEPVGD--GDTRHIGFKVDMPGAYEIASSVVTVGRVPEK----ADLVIPVATVSGVHA 139
           W+L P GD  G T+ I    D     E+   ++  G + +K    + ++IP+  VS +HA
Sbjct: 524 WILLPCGDEAGPTKPICLTQD-----EMKPCII--GSMQQKDHPGSSIIIPLPQVSQMHA 576

Query: 140 RIQKKPGKLLVTDLDSTNGTFIDDK-----RLRPGVISPVSSGSLVTFGDTHLAMFRVSK 194
           RI  K G   +TDL S +GT+I D      R+ P   + V    +V FG +  A +RV K
Sbjct: 577 RINYKDGAFFLTDLRSLHGTWITDNEGRRYRVPPNYPARVRPSDVVEFG-SDKASYRV-K 634

Query: 195 VGDVKAADSDTAEE 208
           V   ++A S++ +E
Sbjct: 635 V--TRSASSESEKE 646