Miyakogusa Predicted Gene

Lj0g3v0251739.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0251739.1 Non Chatacterized Hit- tr|D8S415|D8S415_SELML
Putative uncharacterized protein OS=Selaginella moelle,27.43,3e-18,SET
domain,NULL; TPR-like,NULL; SET,SET domain; TPR_11,NULL; no
description,Tetratricopeptide-like h,CUFF.16499.1
         (528 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g35640.1                                                       766   0.0  
Glyma20g01650.1                                                       124   3e-28
Glyma18g47340.1                                                        96   1e-19
Glyma10g17540.1                                                        71   3e-12
Glyma13g09630.1                                                        61   3e-09
Glyma12g32180.1                                                        52   2e-06
Glyma04g43200.1                                                        50   5e-06

>Glyma07g35640.1 
          Length = 527

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/519 (71%), Positives = 437/519 (84%), Gaps = 10/519 (1%)

Query: 14  RSKATELFIREEWKDSIDAYTHFINLCTHQIQISHSHP-EKLRKSLCIALCNRAEASSRL 72
           RSKATELF+REEW  SI+AY+  I LCT  +   +SHP + LR+SLCIALCNRAEA S+L
Sbjct: 15  RSKATELFLREEWNASIEAYSLIITLCTQTLS-HNSHPTQNLRRSLCIALCNRAEAKSKL 73

Query: 73  RDFHCALQDCDHALNLDPTHFKTLVCKGKILLGLNRYSMALECFRIALLDPQAAGNSETL 132
           ++FHCALQDCDHAL LD TH KTL+CKGKILL LNRYS ALECFR A +D    GN+E  
Sbjct: 74  KNFHCALQDCDHALELDATHSKTLLCKGKILLCLNRYSSALECFRSAAID----GNAENA 129

Query: 133 NGYFQKCKKFEFLSRTGSIDLSDWVANGFPGKAPELAEHIGAVEIKKSEISGRGLFATKN 192
           +GY ++CK  E LS+TG +DLSDWV+NGF GK PELAEHIGAVEI+KSEISGRGLFATKN
Sbjct: 130 SGYLERCKSLELLSKTGCLDLSDWVSNGFKGKVPELAEHIGAVEIRKSEISGRGLFATKN 189

Query: 193 IDAGSLILVTKAIAIERSLLNEG-KDLSEDAQLVIWKNFVDKVSEFIRKCHKTRSLIGRL 251
           IDAG+LILVTKAIA+ERS++  G +DL EDAQL +WKNF+DKV E + KC+KT+ LI RL
Sbjct: 190 IDAGALILVTKAIAMERSIIMGGVQDLCEDAQLAMWKNFIDKVFEVVGKCYKTKGLITRL 249

Query: 252 SIGENEDGLEVPDVDLFRPQNVE--DVESIEEIDMVKLLAILDVNSLTEDAVSANILRKQ 309
           S GENED LEV DV LFRP++VE  D +++  +DMVKL+ ILDVNSLTEDAVSAN+L + 
Sbjct: 250 SCGENEDELEVLDVGLFRPESVEKDDGDAVVGVDMVKLVGILDVNSLTEDAVSANVLTRG 309

Query: 310 NDCYGVGLWLLPAFINHSCCPNARRLHVGDYLIVHASKDLKAGEEITFAYLDPLSPLNKR 369
           NDCYGVGLWLLP+F+NHSC PNARRLHVGDYL+VHASKDLKAGEE+TFAY DPL  L+KR
Sbjct: 310 NDCYGVGLWLLPSFVNHSCVPNARRLHVGDYLVVHASKDLKAGEEVTFAYFDPLCGLSKR 369

Query: 370 KEMSVTWGIHCKCRRCKFEGEIFSKQEMKEIEIGVERGLLDVGGVVYKLEDQMKRWKVRG 429
           KEMSV WGIHCKC+RC+FEGE+FSKQE++EIEIG+ERG +DVGGVV+KLE+QMKR KVRG
Sbjct: 370 KEMSVNWGIHCKCKRCRFEGEVFSKQEIREIEIGLERG-MDVGGVVFKLEEQMKRMKVRG 428

Query: 430 KEKGFLRASFWSAYSEAYRSERSMKRWGRRIPALXXXXXXXXXXXXXXHRLLRILVEEMK 489
           KEKG+LRASFW AYSEAYRSER+MKRWGRRIP +              HRLL+++VEE+K
Sbjct: 429 KEKGYLRASFWEAYSEAYRSERAMKRWGRRIPTMEAVVDSISDVVGGDHRLLKMMVEELK 488

Query: 490 KNGGGHVEMEKVFKLAKDVYGKVVKKQAMRKILELCIAD 528
           KNGGG VE EKVFK+A+DV+GKVVKKQAM+ +LELCI D
Sbjct: 489 KNGGGVVEREKVFKMARDVFGKVVKKQAMKTLLELCIGD 527


>Glyma20g01650.1 
          Length = 179

 Score =  124 bits (310), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 57/99 (57%), Positives = 68/99 (68%), Gaps = 20/99 (20%)

Query: 291 LDVNSLTEDAVSANILRKQNDCYGVGLWLLPAFINHSCCPNARRLHVGDYLIVHASKDLK 350
           LDVNSLT D VS N+                    HSCCPN RRLHVGDYL++HASKDLK
Sbjct: 45  LDVNSLTGDVVSGNV--------------------HSCCPNTRRLHVGDYLVIHASKDLK 84

Query: 351 AGEEITFAYLDPLSPLNKRKEMSVTWGIHCKCRRCKFEG 389
           AG E++FAYLDP   L+KR EMS+ W I+CKC+RC+F+G
Sbjct: 85  AGAEVSFAYLDPFCGLSKRNEMSLNWRIYCKCKRCRFKG 123


>Glyma18g47340.1 
          Length = 150

 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 77/144 (53%), Gaps = 32/144 (22%)

Query: 50  HPEKLRKSLCIALCNRAEASSRLRDFHCALQDCDHALNLDPTHFKTLVCKGKILLGLNRY 109
           H +KL +SL IALCN A+A S+L++F+ ALQDCDH L LD TH K L     +   + ++
Sbjct: 8   HFQKLCRSLFIALCNLAKARSKLKNFYNALQDCDHTLELDATHLKNLFVSEWVFGKMQKF 67

Query: 110 SMALECFRIALLDPQAAGNSETLNGYFQKCKKFEFLSRTGSIDLSDWVANGFPGKAPELA 169
              +E                  NG F   +   F           WV     GK PEL 
Sbjct: 68  GAFVE------------------NGVFGYFRLVGF----------KWV----RGKVPELQ 95

Query: 170 EHIGAVEIKKSEISGRGLFATKNI 193
           +HIGAVEI++SEI+GR LF+TKN+
Sbjct: 96  DHIGAVEIRRSEINGRWLFSTKNM 119


>Glyma10g17540.1 
          Length = 60

 Score = 71.2 bits (173), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 41/57 (71%), Gaps = 1/57 (1%)

Query: 70  SRLRDF-HCALQDCDHALNLDPTHFKTLVCKGKILLGLNRYSMALECFRIALLDPQA 125
           S+L+DF H  L DC+H L LD TH KTL+CKGKILL L  YS ALECFR A +D  A
Sbjct: 2   SKLKDFFHNVLHDCNHVLELDATHSKTLLCKGKILLSLKLYSSALECFRSASIDGNA 58


>Glyma13g09630.1 
          Length = 48

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 33/41 (80%)

Query: 64  NRAEASSRLRDFHCALQDCDHALNLDPTHFKTLVCKGKILL 104
           NR +  S+L+ FH ALQDCDHAL LD TH KTL+CKG+ILL
Sbjct: 3   NREKTRSKLKFFHDALQDCDHALELDATHLKTLLCKGQILL 43


>Glyma12g32180.1 
          Length = 484

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)

Query: 312 CYGVGLWLLPAFINHSCCPNARRLHV-----GDYLIVHASKDLKAGEEITFAYLDPLSPL 366
           C G   + L + +NHSCCPNA+         G   I+ A + +  GEEIT +Y+D     
Sbjct: 402 CEGTAFFPLQSCLNHSCCPNAKAFKREEDKDGQATII-AQRSICKGEEITISYVDEDLTF 460

Query: 367 NKRKEMSVTWGIHCKCRRC 385
            +R+     +G  C+C +C
Sbjct: 461 EERQASLADYGFRCRCSKC 479


>Glyma04g43200.1 
          Length = 485

 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 2/108 (1%)

Query: 314 GVGLWLLPAFINHSCCPNARRLHVGDYLIVHASKDLKAGEEITFAYLDPL-SPLNKRKEM 372
           G GL+ + + INHSC PN+  +  G   +V A + + +G E+  +Y++   S + ++K +
Sbjct: 207 GTGLYPVISIINHSCLPNSVLVFEGSSALVRAVQHIPSGTEVLISYIETAESTMTRQKAL 266

Query: 373 SVTWGIHCKCRRCKFEGEIFSKQEMKEIEIGVERGLLDVGGVVYKLED 420
              +   C C RC   G+    QE   +E G +      GG + +  D
Sbjct: 267 KEQYLFTCTCPRCSKVGQYDDIQESAILE-GYKCKSEKCGGFLLRTTD 313