Miyakogusa Predicted Gene

Lj0g3v0250909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0250909.1 Non Chatacterized Hit- tr|D7KCT1|D7KCT1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,74.58,6e-19,seg,NULL,CUFF.16430.1
         (122 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g31740.1                                                       125   1e-29
Glyma20g35870.1                                                       120   4e-28

>Glyma10g31740.1 
          Length = 131

 Score =  125 bits (313), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 61/72 (84%), Positives = 64/72 (88%)

Query: 51  HGTGNGVTAFFFNPAQDPIVQEALKEPVAFLGGMFAGILRLDLNEEPLKEWVTRTVEAAG 110
           +G  NGV AFFFNP QDPIV+EALKEPVAFLGGMFAGILRLDLNEEPLKEWVTRTVEAAG
Sbjct: 49  NGNRNGVKAFFFNPEQDPIVKEALKEPVAFLGGMFAGILRLDLNEEPLKEWVTRTVEAAG 108

Query: 111 VDEEETTTEGST 122
           + EEE  TE ST
Sbjct: 109 ISEEEANTEEST 120


>Glyma20g35870.1 
          Length = 131

 Score =  120 bits (300), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 58/72 (80%), Positives = 62/72 (86%)

Query: 51  HGTGNGVTAFFFNPAQDPIVQEALKEPVAFLGGMFAGILRLDLNEEPLKEWVTRTVEAAG 110
           +G GNGV AFF NP QD I++EALKEPVAFLGGMFAGILRLDLNEEPLKEWVTRT EAAG
Sbjct: 49  NGNGNGVKAFFINPEQDLIIKEALKEPVAFLGGMFAGILRLDLNEEPLKEWVTRTAEAAG 108

Query: 111 VDEEETTTEGST 122
           + EEE  TE ST
Sbjct: 109 ISEEEANTEEST 120