Miyakogusa Predicted Gene

Lj0g3v0249789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0249789.1 Non Chatacterized Hit- tr|F6GVX5|F6GVX5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,53.42,0.000000000000002,seg,NULL,CUFF.16336.1
         (111 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g11340.1                                                       156   4e-39
Glyma04g43330.1                                                       151   1e-37
Glyma04g13010.1                                                        61   3e-10

>Glyma06g11340.1 
          Length = 467

 Score =  156 bits (395), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 74/80 (92%), Positives = 77/80 (96%)

Query: 1  MENADVFLGLHDFLERMRQPAAADFVKAIKSFIVSFSNNAPDPDRDSAAVQEFLANMEAA 60
          MENADVFLGLHDFLERMRQP+AA+FVKAIKSFIVSFSNNAPDPDRDSAAVQ FLA MEA 
Sbjct: 1  MENADVFLGLHDFLERMRQPSAAEFVKAIKSFIVSFSNNAPDPDRDSAAVQAFLAKMEAD 60

Query: 61 FKAHPLWAGCSEEELESAGE 80
          F+AHPLWAGCSEEELESAGE
Sbjct: 61 FRAHPLWAGCSEEELESAGE 80


>Glyma04g43330.1 
          Length = 443

 Score =  151 bits (382), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 72/80 (90%), Positives = 74/80 (92%)

Query: 1  MENADVFLGLHDFLERMRQPAAADFVKAIKSFIVSFSNNAPDPDRDSAAVQEFLANMEAA 60
          MENADVFLGLHDFLERMRQP+AA+FVKAIKSFIVSFSNNAPDPDRDSA VQ FLA MEA 
Sbjct: 1  MENADVFLGLHDFLERMRQPSAAEFVKAIKSFIVSFSNNAPDPDRDSATVQAFLAKMEAD 60

Query: 61 FKAHPLWAGCSEEELESAGE 80
          F AHPLWAGCSEEEL SAGE
Sbjct: 61 FSAHPLWAGCSEEELASAGE 80


>Glyma04g13010.1 
          Length = 411

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 10/88 (11%)

Query: 3  NADVFLGLHDFLERMRQPAAADFVKAIKSFIVSFSN----------NAPDPDRDSAAVQE 52
          + +V    HDFL RMR PA+ D V++IK  I +             + P P+ D   VQ+
Sbjct: 2  DMEVSTSFHDFLYRMRHPASLDLVRSIKRHIFTHFFQFFFIVSFSFHQPKPENDGKRVQD 61

Query: 53 FLANMEAAFKAHPLWAGCSEEELESAGE 80
          F  +MEAA + H LW   SEE+++ A +
Sbjct: 62 FFVSMEAAIRDHSLWTTASEEDIDCAMQ 89