Miyakogusa Predicted Gene
- Lj0g3v0249129.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0249129.1 tr|Q9LEU5|Q9LEU5_ARATH Cylicin-related protein
OS=Arabidopsis thaliana GN=T30N20_220 PE=2
SV=1,53.85,3e-19,Tudor/PWWP/MBT,NULL; no description,NULL;
LBR_tudor,Lamin-B receptor of TUDOR domain; ANDROGEN
INDUC,NODE_25720_length_605_cov_193.783478.path2.1
(112 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g06630.2 166 6e-42
Glyma04g06570.1 166 6e-42
Glyma04g06570.2 166 7e-42
Glyma06g06630.1 165 8e-42
Glyma06g06630.3 165 9e-42
Glyma06g06650.2 165 1e-41
Glyma06g06650.1 165 1e-41
Glyma04g06560.2 164 1e-41
Glyma04g06560.1 164 1e-41
Glyma04g06560.4 164 2e-41
Glyma04g06560.3 158 1e-39
Glyma06g06640.1 123 4e-29
Glyma09g01700.1 83 8e-17
Glyma07g02700.2 81 2e-16
Glyma15g12670.1 79 8e-16
Glyma07g39830.1 79 2e-15
Glyma19g40350.1 65 2e-11
Glyma18g51890.1 59 1e-09
Glyma08g29010.1 57 3e-09
Glyma08g23290.1 52 2e-07
Glyma14g16400.1 47 3e-06
Glyma14g16390.1 47 5e-06
Glyma17g30730.1 47 5e-06
Glyma17g30490.1 46 9e-06
>Glyma06g06630.2
Length = 892
Score = 166 bits (420), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 81/109 (74%), Positives = 92/109 (84%)
Query: 3 VYSPRSGTKSTKSENTEEIPLTSAKRKRTPGKEKESDTKKYGENLVGLRVKVWWPEDREF 62
V S RSGTKSTK+EN+EE P T+ KRKR+ GKE ES+ K+YG+NLVGLRVKVWWP+DREF
Sbjct: 582 VSSLRSGTKSTKNENSEETPKTNVKRKRSSGKENESNAKEYGQNLVGLRVKVWWPDDREF 641
Query: 63 YTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVIKKADSDADGGRR 111
Y GVV+SFDSA+KKHKVLYDDGDEETLNL +EKW VI DSDAD R
Sbjct: 642 YRGVVDSFDSAKKKHKVLYDDGDEETLNLVKEKWKVIGADDSDADEEER 690
>Glyma04g06570.1
Length = 912
Score = 166 bits (419), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 80/105 (76%), Positives = 90/105 (85%), Gaps = 1/105 (0%)
Query: 3 VYSPRSGTKSTKSENTEEIPLTSAKRKRTPGKEKESDTKKYGENLVGLRVKVWWPEDREF 62
V SP SGTKSTK +EE P T+ KRKRTPGKE +SD K+YGENLVGLRVKVWWP+D EF
Sbjct: 590 VSSPTSGTKSTKDGKSEETPKTNVKRKRTPGKENDSDVKEYGENLVGLRVKVWWPKDHEF 649
Query: 63 YTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVIKKADSDAD 107
Y GV++SFDSA+KKHKVLYDDGDEETLNL +EKW VI +ADSDAD
Sbjct: 650 YIGVIDSFDSAKKKHKVLYDDGDEETLNLVKEKWKVI-EADSDAD 693
>Glyma04g06570.2
Length = 812
Score = 166 bits (419), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 80/105 (76%), Positives = 90/105 (85%), Gaps = 1/105 (0%)
Query: 3 VYSPRSGTKSTKSENTEEIPLTSAKRKRTPGKEKESDTKKYGENLVGLRVKVWWPEDREF 62
V SP SGTKSTK +EE P T+ KRKRTPGKE +SD K+YGENLVGLRVKVWWP+D EF
Sbjct: 490 VSSPTSGTKSTKDGKSEETPKTNVKRKRTPGKENDSDVKEYGENLVGLRVKVWWPKDHEF 549
Query: 63 YTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVIKKADSDAD 107
Y GV++SFDSA+KKHKVLYDDGDEETLNL +EKW VI +ADSDAD
Sbjct: 550 YIGVIDSFDSAKKKHKVLYDDGDEETLNLVKEKWKVI-EADSDAD 593
>Glyma06g06630.1
Length = 917
Score = 165 bits (418), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/109 (74%), Positives = 92/109 (84%)
Query: 3 VYSPRSGTKSTKSENTEEIPLTSAKRKRTPGKEKESDTKKYGENLVGLRVKVWWPEDREF 62
V S RSGTKSTK+EN+EE P T+ KRKR+ GKE ES+ K+YG+NLVGLRVKVWWP+DREF
Sbjct: 582 VSSLRSGTKSTKNENSEETPKTNVKRKRSSGKENESNAKEYGQNLVGLRVKVWWPDDREF 641
Query: 63 YTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVIKKADSDADGGRR 111
Y GVV+SFDSA+KKHKVLYDDGDEETLNL +EKW VI DSDAD R
Sbjct: 642 YRGVVDSFDSAKKKHKVLYDDGDEETLNLVKEKWKVIGADDSDADEEER 690
>Glyma06g06630.3
Length = 703
Score = 165 bits (418), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 80/105 (76%), Positives = 91/105 (86%)
Query: 3 VYSPRSGTKSTKSENTEEIPLTSAKRKRTPGKEKESDTKKYGENLVGLRVKVWWPEDREF 62
V S RSGTKSTK+EN+EE P T+ KRKR+ GKE ES+ K+YG+NLVGLRVKVWWP+DREF
Sbjct: 582 VSSLRSGTKSTKNENSEETPKTNVKRKRSSGKENESNAKEYGQNLVGLRVKVWWPDDREF 641
Query: 63 YTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVIKKADSDAD 107
Y GVV+SFDSA+KKHKVLYDDGDEETLNL +EKW VI DSDAD
Sbjct: 642 YRGVVDSFDSAKKKHKVLYDDGDEETLNLVKEKWKVIGADDSDAD 686
>Glyma06g06650.2
Length = 900
Score = 165 bits (418), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/105 (77%), Positives = 90/105 (85%), Gaps = 1/105 (0%)
Query: 3 VYSPRSGTKSTKSENTEEIPLTSAKRKRTPGKEKESDTKKYGENLVGLRVKVWWPEDREF 62
V SP SGTKSTK +EE P T+ KR+RTPGKE ES K+YGENLVGLRVKVWWP+DREF
Sbjct: 578 VSSPTSGTKSTKDGKSEETPKTNLKRERTPGKENESGVKEYGENLVGLRVKVWWPKDREF 637
Query: 63 YTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVIKKADSDAD 107
Y GV++SFDSARKKHKVLYDDGDEETLNL +EKW VI +ADSDAD
Sbjct: 638 YIGVIDSFDSARKKHKVLYDDGDEETLNLVKEKWKVI-EADSDAD 681
>Glyma06g06650.1
Length = 901
Score = 165 bits (417), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/105 (77%), Positives = 90/105 (85%), Gaps = 1/105 (0%)
Query: 3 VYSPRSGTKSTKSENTEEIPLTSAKRKRTPGKEKESDTKKYGENLVGLRVKVWWPEDREF 62
V SP SGTKSTK +EE P T+ KR+RTPGKE ES K+YGENLVGLRVKVWWP+DREF
Sbjct: 578 VSSPTSGTKSTKDGKSEETPKTNLKRERTPGKENESGVKEYGENLVGLRVKVWWPKDREF 637
Query: 63 YTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVIKKADSDAD 107
Y GV++SFDSARKKHKVLYDDGDEETLNL +EKW VI +ADSDAD
Sbjct: 638 YIGVIDSFDSARKKHKVLYDDGDEETLNLVKEKWKVI-EADSDAD 681
>Glyma04g06560.2
Length = 869
Score = 164 bits (416), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 92/109 (84%)
Query: 3 VYSPRSGTKSTKSENTEEIPLTSAKRKRTPGKEKESDTKKYGENLVGLRVKVWWPEDREF 62
V S RSGTKSTK+EN+EE P T+ KRK + GKE ES+ K+YG+NLVGLRVKVWWP+DREF
Sbjct: 584 VSSLRSGTKSTKNENSEETPKTNVKRKHSSGKENESNAKEYGQNLVGLRVKVWWPDDREF 643
Query: 63 YTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVIKKADSDADGGRR 111
Y GV++SFDSA+KKHKVLYDDGDEETLNL +EKW VI+ DSDAD R
Sbjct: 644 YKGVIDSFDSAKKKHKVLYDDGDEETLNLVKEKWKVIEADDSDADEEER 692
>Glyma04g06560.1
Length = 869
Score = 164 bits (416), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 92/109 (84%)
Query: 3 VYSPRSGTKSTKSENTEEIPLTSAKRKRTPGKEKESDTKKYGENLVGLRVKVWWPEDREF 62
V S RSGTKSTK+EN+EE P T+ KRK + GKE ES+ K+YG+NLVGLRVKVWWP+DREF
Sbjct: 584 VSSLRSGTKSTKNENSEETPKTNVKRKHSSGKENESNAKEYGQNLVGLRVKVWWPDDREF 643
Query: 63 YTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVIKKADSDADGGRR 111
Y GV++SFDSA+KKHKVLYDDGDEETLNL +EKW VI+ DSDAD R
Sbjct: 644 YKGVIDSFDSAKKKHKVLYDDGDEETLNLVKEKWKVIEADDSDADEEER 692
>Glyma04g06560.4
Length = 868
Score = 164 bits (416), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 92/109 (84%)
Query: 3 VYSPRSGTKSTKSENTEEIPLTSAKRKRTPGKEKESDTKKYGENLVGLRVKVWWPEDREF 62
V S RSGTKSTK+EN+EE P T+ KRK + GKE ES+ K+YG+NLVGLRVKVWWP+DREF
Sbjct: 584 VSSLRSGTKSTKNENSEETPKTNVKRKHSSGKENESNAKEYGQNLVGLRVKVWWPDDREF 643
Query: 63 YTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVIKKADSDADGGRR 111
Y GV++SFDSA+KKHKVLYDDGDEETLNL +EKW VI+ DSDAD R
Sbjct: 644 YKGVIDSFDSAKKKHKVLYDDGDEETLNLVKEKWKVIEADDSDADEEER 692
>Glyma04g06560.3
Length = 868
Score = 158 bits (400), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/109 (71%), Positives = 91/109 (83%), Gaps = 1/109 (0%)
Query: 3 VYSPRSGTKSTKSENTEEIPLTSAKRKRTPGKEKESDTKKYGENLVGLRVKVWWPEDREF 62
V S RSGTKSTK+EN+EE P T+ KRK + GKE S+ K+YG+NLVGLRVKVWWP+DREF
Sbjct: 584 VSSLRSGTKSTKNENSEETPKTNVKRKHSSGKEN-SNAKEYGQNLVGLRVKVWWPDDREF 642
Query: 63 YTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVIKKADSDADGGRR 111
Y GV++SFDSA+KKHKVLYDDGDEETLNL +EKW VI+ DSDAD R
Sbjct: 643 YKGVIDSFDSAKKKHKVLYDDGDEETLNLVKEKWKVIEADDSDADEEER 691
>Glyma06g06640.1
Length = 858
Score = 123 bits (309), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
Query: 35 EKESDTKKYGENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREE 94
+KES TK+YG+NLVGL+VKVWWP+D EFY GV+ SFDSA+KKHKVLYDDGDEETLNL +E
Sbjct: 592 DKESSTKEYGQNLVGLQVKVWWPDDHEFYKGVIVSFDSAKKKHKVLYDDGDEETLNLVKE 651
Query: 95 KWGVIKKADSDADGGRR 111
KW VI +ADSDAD R
Sbjct: 652 KWKVI-EADSDADKEER 667
>Glyma09g01700.1
Length = 1382
Score = 82.8 bits (203), Expect = 8e-17, Method: Composition-based stats.
Identities = 47/105 (44%), Positives = 65/105 (61%), Gaps = 14/105 (13%)
Query: 5 SPRSGTKSTKSENTE-EIPLTSAK---RKRTPG------KEKESDTKKYGENLVGLRVKV 54
SP + + KS+N + + SAK RK G KE+ESD E+L+G R+KV
Sbjct: 1259 SPDNTKPTDKSKNNNLKSSIGSAKKLKRKSIGGLAKCTTKEEESD----AEDLIGCRIKV 1314
Query: 55 WWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVI 99
WWP D++FY G V S+DS ++KH +LY DGD E LNL +E+W +I
Sbjct: 1315 WWPLDKKFYEGTVKSYDSLKRKHVILYKDGDVEVLNLEKEQWKLI 1359
>Glyma07g02700.2
Length = 710
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 20 EIPLTSAKRKRTPGKEKESDTKKYGENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKV 79
E P S +R+ + S++ G +LV R+KVWWP+D+ FY GV++S+D + KHK+
Sbjct: 539 ETPQASLRRRHITANVEASESCDDGSSLVCRRIKVWWPKDKMFYEGVIDSYDPIKGKHKI 598
Query: 80 LYDDGDEETLNLREEKW 96
LY DGD E LNL+ ++W
Sbjct: 599 LYADGDVEVLNLKRQRW 615
>Glyma15g12670.1
Length = 90
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%), Gaps = 4/63 (6%)
Query: 34 KEKESDTKKYGENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLRE 93
KE ESD E+L+G R+KVWWP D++FY G V S+DS ++KH +LY+DGD E LNL +
Sbjct: 4 KEGESD----AEDLIGCRIKVWWPLDKKFYEGTVKSYDSLKRKHVILYNDGDVEVLNLEK 59
Query: 94 EKW 96
E+W
Sbjct: 60 ERW 62
>Glyma07g39830.1
Length = 1655
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 10/81 (12%)
Query: 27 KRKRTPG------KEKESDTKKYGENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVL 80
KRK G KE E DT E+L+G R+KVWWP D++FY G + S+D + KH +L
Sbjct: 1347 KRKSISGLAKCTTKEGEIDT----EDLIGCRIKVWWPTDKKFYGGTIKSYDPLKGKHVIL 1402
Query: 81 YDDGDEETLNLREEKWGVIKK 101
YDDGD E L L +E+W +I K
Sbjct: 1403 YDDGDVEILRLEKERWELIDK 1423
>Glyma19g40350.1
Length = 1273
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 43 YGENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREEK 95
Y + L+G R+KV+WP D+ +Y G V SFDS KH V YDDG+EE+L+L +EK
Sbjct: 85 YFQELIGRRIKVYWPLDKAWYEGSVKSFDSLTSKHVVRYDDGEEESLDLSKEK 137
>Glyma18g51890.1
Length = 1088
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 32/50 (64%)
Query: 45 ENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREE 94
E VGLR KV+WP D + Y G V S+D K H V YDDGDEE+L L E
Sbjct: 210 EAFVGLRCKVYWPMDLKAYIGYVRSYDKETKIHHVKYDDGDEESLILANE 259
>Glyma08g29010.1
Length = 1088
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 31/50 (62%)
Query: 45 ENLVGLRVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREE 94
E VGLR KV+WP D + Y G V S+D K H V YDDGDEE L + E
Sbjct: 209 EAFVGLRCKVYWPMDLKAYIGYVRSYDKETKIHHVKYDDGDEENLIIANE 258
>Glyma08g23290.1
Length = 130
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 62 FYTGVVNSFDSARKKHKVLYDDGDEETLNLREEKW 96
FY GV++S+D + KHK+LY DGD E LNL+ ++W
Sbjct: 2 FYEGVIDSYDPIKGKHKILYADGDVEVLNLKRQRW 36
>Glyma14g16400.1
Length = 1532
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 34/49 (69%)
Query: 51 RVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVI 99
R+K++WP D+ +Y G+V+++D K + + YDD D E +NL E++ ++
Sbjct: 340 RIKIFWPLDQSWYYGLVDNYDEGSKLYHIKYDDRDVEWVNLHTERFKLL 388
>Glyma14g16390.1
Length = 1445
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 34/49 (69%)
Query: 51 RVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVI 99
R+K++WP D+ +Y G+V+++D K + + YDD D E +NL E++ ++
Sbjct: 297 RIKIFWPLDQSWYYGLVDNYDEGSKLYHIKYDDRDVEWVNLETERFKLL 345
>Glyma17g30730.1
Length = 1517
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 51 RVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVI 99
R+K++WP D+ +Y G V+++D K + + YDD D E +NL E++ ++
Sbjct: 338 RIKIFWPLDQSWYYGFVDNYDEGSKLYHIKYDDRDVEWVNLHTERFKLL 386
>Glyma17g30490.1
Length = 1478
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 35/49 (71%)
Query: 51 RVKVWWPEDREFYTGVVNSFDSARKKHKVLYDDGDEETLNLREEKWGVI 99
R+K++WP D+ +Y G+V+++D K + + YDD D + +NL+ E++ ++
Sbjct: 338 RIKIFWPLDQSWYYGLVDNYDEGSKLYHIKYDDRDVKWVNLQTERFKLL 386