Miyakogusa Predicted Gene

Lj0g3v0249079.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0249079.1 tr|G7I4G2|G7I4G2_MEDTR FAR1-related protein
OS=Medicago truncatula GN=MTR_1g019850 PE=4 SV=1,68.49,3e-17,FAR1,FAR1
DNA binding domain,CUFF.17567.1
         (255 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g20510.1                                                       145   6e-35
Glyma06g38150.1                                                       139   3e-33
Glyma17g16270.1                                                       118   6e-27
Glyma17g30760.1                                                       109   3e-24
Glyma12g14290.1                                                        99   3e-21
Glyma10g19910.1                                                        87   2e-17
Glyma09g20300.1                                                        70   3e-12
Glyma11g09400.1                                                        63   3e-10
Glyma14g00240.1                                                        60   2e-09

>Glyma15g20510.1 
          Length = 507

 Score =  145 bits (365), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 65/108 (60%), Positives = 86/108 (79%), Gaps = 1/108 (0%)

Query: 6   KRCSTSRTDCKASLVVSKARKRHNWAIVSFNNDHNHIMVSPKSVKYLRCHKEGMSVAAKN 65
           ++CST RT C+AS +VS+     NW I SF+NDHNH+M+SPKSV Y+RCHK+ MSV A++
Sbjct: 73  RKCSTLRTSCQASPIVSRGDIASNWVIKSFSNDHNHVMLSPKSVCYMRCHKK-MSVVAQS 131

Query: 66  LVEKFHQDGLPTGKVATMFNNGSSSFSKRDCWNHLRNVRSRKLEVGDA 113
           LVEKF ++GL TGKVA++FNN  S FS RDCWNH+RN+R + L++GD 
Sbjct: 132 LVEKFEEEGLLTGKVASIFNNSDSYFSDRDCWNHIRNLRRKNLDLGDV 179


>Glyma06g38150.1 
          Length = 177

 Score =  139 bits (350), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 61/107 (57%), Positives = 85/107 (79%), Gaps = 1/107 (0%)

Query: 5   RKRCSTSRTDCKASLVVSKARKRHNWAIVSFNNDHNHIMVSPKSVKYLRCHKEGMSVAAK 64
           ++ C T +T C+ASL +S+     NW I SF+ND NH+M++PKSV Y+RCHK+ MSV A+
Sbjct: 70  KRNCLTLQTSCQASLTISRGDIASNWVIKSFSNDDNHVMLNPKSVCYMRCHKK-MSVPAQ 128

Query: 65  NLVEKFHQDGLPTGKVATMFNNGSSSFSKRDCWNHLRNVRSRKLEVG 111
           +LVEKF ++GLPT KVA++FNNG SSFS +DCWNH+RN+R + L++G
Sbjct: 129 SLVEKFEEEGLPTRKVASIFNNGDSSFSNKDCWNHIRNLRRKNLDIG 175


>Glyma17g16270.1 
          Length = 205

 Score =  118 bits (295), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 56/99 (56%), Positives = 74/99 (74%), Gaps = 8/99 (8%)

Query: 15  CKASLVVSKARKRHNWAIVSFNNDHNHIMVSPKSVKYLRCHKEGMSVAAKNLVEKFHQDG 74
           C+ASL +S+     NW + SF+NDHNH+M+SPKSV Y+RCHK+ MSV A++LVEK     
Sbjct: 1   CQASLTISRGDIAINWVVKSFSNDHNHVMLSPKSVCYMRCHKK-MSVVAQSLVEKLR--- 56

Query: 75  LPTGKVATMFNNGSSSFSKRDCWNHLRNVRSRKLEVGDA 113
               KVA++FNNG SSFS RDCWNH++N+R + L+VGD 
Sbjct: 57  ----KVASIFNNGDSSFSNRDCWNHIKNLRRKNLDVGDV 91


>Glyma17g30760.1 
          Length = 484

 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/81 (62%), Positives = 65/81 (80%), Gaps = 1/81 (1%)

Query: 15  CKASLVVSKARKRHNWAIVSFNNDHNHIMVSPKSVKYLRCHKEGMSVAAKNLVEKFHQDG 74
           C+ SL +S+     NW I SF+NDHNH+M+ PKSV Y+RCHK+ MSVAA++LVEKF ++G
Sbjct: 50  CQTSLTISRDGVASNWVIKSFSNDHNHVMLGPKSVCYMRCHKK-MSVAAQSLVEKFEEEG 108

Query: 75  LPTGKVATMFNNGSSSFSKRD 95
           LPTGKVA++FNNG SS S RD
Sbjct: 109 LPTGKVASIFNNGDSSSSNRD 129


>Glyma12g14290.1 
          Length = 431

 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 102/211 (48%), Gaps = 44/211 (20%)

Query: 4   VRKRCSTSRTDCKASL--VVSKARKRHNWAIVSFNNDHNHIMVSPKSVKYLRCHKEGMSV 61
           +RK C  S      S+  +V+  +KR  W I++FNN  N           L CHK  MS+
Sbjct: 54  LRKVCVYSYATMLVSIQPIVAVMKKRLKWIIINFNNVCNM----------LWCHKI-MSM 102

Query: 62  AAKNLVEKFHQDGLPTGKVATMFNNGSSSFSKRDCWNHLRNVRSRKLEVGDAN------- 114
           AAKN  EKF + GLP GKV   FN+ SSSFS RDCWNH RN++S+ L+VGDA        
Sbjct: 103 AAKNPFEKFAKKGLPIGKVVGFFNDVSSSFSDRDCWNHFRNLQSKNLKVGDAQTIFNFCK 162

Query: 115 ----KNVGFVGGETNL-------VSERD----------DLATLRGM--HVHRLLMSLADL 151
               +N+ FV   + L       V + D            A + G+  +   +L   A L
Sbjct: 163 QKQVENLDFVDARSRLAYTIFGDVIKFDTTYKTKKYSMSFAPINGLNNYYQTILFGCALL 222

Query: 152 AAKSEK-IDKFISSQLEEIYKKASMMVSEMQ 181
             + EK I  F  + L+ I  K+ M++   Q
Sbjct: 223 KDEIEKSITWFFENSLQAIGGKSPMLIIAYQ 253


>Glyma10g19910.1 
          Length = 81

 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/73 (57%), Positives = 51/73 (69%), Gaps = 1/73 (1%)

Query: 17 ASLVVSKARKRHNWAIVSFNNDHNHIMVSPKSVKYLRCHKEGMSVAAKNLVEKFHQDGLP 76
          ASL +S   K +NW I SFNN HNH+M+ PKSV Y+R HK+ M+V    LVEKF  +GLP
Sbjct: 1  ASLTISIGDKENNWVIKSFNNVHNHVMLGPKSVFYMRYHKK-MNVPVNILVEKFEDEGLP 59

Query: 77 TGKVATMFNNGSS 89
          TGKV  + NNG S
Sbjct: 60 TGKVVVVLNNGES 72


>Glyma09g20300.1 
          Length = 120

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 41/52 (78%), Gaps = 1/52 (1%)

Query: 29 NWAIVSFNNDHNHIMVSPKSVKYLRCHKEGMSVAAKNLVEKFHQDGLPTGKV 80
          NW I SFN++HNH M+SPKSV Y+RCHK+ M+   K LVEKF Q+G+P GK+
Sbjct: 21 NWIIKSFNDNHNHGMISPKSVSYMRCHKK-MNDDKKCLVEKFEQEGIPRGKL 71


>Glyma11g09400.1 
          Length = 774

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 19/130 (14%)

Query: 3   KVRKRCSTSRTDCKASLVVSKARKRHNWAIVSFNNDHNHIMVSPKSVKYLRCHKEGMSVA 62
           +V++  + +R  CKA LVV K +    W + SF  +HNH +V P  V  LR H+  +S  
Sbjct: 118 RVKRPRAETRVGCKAMLVV-KIQDSGRWVVSSFLKEHNHELVPPDKVHCLRSHRH-VSGP 175

Query: 63  AKNLVEKFHQDGL-PTGKVATMFNNGSS----SFSKRDCWNHLRNVRSRKLEVGDANKNV 117
           AK+L++     G+ P+G ++ +     +     F++RDC N++R+ R R L         
Sbjct: 176 AKSLIDTLQGAGIGPSGIMSALIKEYGAISNIGFTERDCRNYMRSSRQRTL--------- 226

Query: 118 GFVGGETNLV 127
              GG+T ++
Sbjct: 227 ---GGDTQIL 233


>Glyma14g00240.1 
          Length = 691

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 8/116 (6%)

Query: 2   KKVRKRCSTSRTDCKASLVVSKARKRHNWAIVSFNNDHNHIMVSPKSVKYLRCHKEGMSV 61
           +++++  + +R  CKASL V K +    W +  F  +HNH +V P  V  LR H++ +S 
Sbjct: 119 REIKRPRTITRVGCKASLSV-KMQDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQ-ISG 176

Query: 62  AAKNLVEKFHQDGLPTGKV--ATMFNNGSSS---FSKRDCWNHLRNVRSRKLEVGD 112
           AAK L++     G+   ++  A +   G  S   F++ DC N++RN R R LE GD
Sbjct: 177 AAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRLRSLE-GD 231