Miyakogusa Predicted Gene

Lj0g3v0248929.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0248929.1 Non Chatacterized Hit- tr|B9RSM2|B9RSM2_RICCO
Ubiquitin-protein ligase, putative OS=Ricinus communis,34.71,2e-16,
,CUFF.16262.1
         (126 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g06110.1                                                       145   7e-36
Glyma13g07530.1                                                       143   5e-35

>Glyma19g06110.1 
          Length = 636

 Score =  145 bits (367), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 72/121 (59%), Positives = 94/121 (77%)

Query: 1   MEEGEVETILRELVRKQNLRSGENTLAVEFQTRLLTLLRTASGHESPSLTTIDGNCSWLN 60
           +++GE + ILRELVRKQNLR G+NTL V+FQ R+LTL+ T SG+ESPSLTT +GN SWL 
Sbjct: 356 LKKGEADAILRELVRKQNLRRGQNTLVVQFQIRVLTLILTDSGNESPSLTTSNGNNSWLK 415

Query: 61  ALGDLTLQSPLVLKDFPVEMLNEGLSGYCHLSLCDKLRLLTFICDEVLSSEKVRSHIEKE 120
            L DL  +S  +LKDFP++ L EG+SGY +L L  KL LL F+CDE L+++K+RS IE +
Sbjct: 416 PLEDLITKSNHILKDFPLDWLQEGVSGYSNLDLSKKLTLLNFLCDEALATDKLRSCIEDK 475

Query: 121 N 121
           N
Sbjct: 476 N 476


>Glyma13g07530.1 
          Length = 708

 Score =  143 bits (360), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 72/121 (59%), Positives = 91/121 (75%)

Query: 1   MEEGEVETILRELVRKQNLRSGENTLAVEFQTRLLTLLRTASGHESPSLTTIDGNCSWLN 60
           +++GE E ILRELVRKQNLR G+NTL V+FQ R+LTL+ T SG+ESPSLTT +GN SWL 
Sbjct: 427 LKKGEAEAILRELVRKQNLRRGQNTLVVQFQIRVLTLILTDSGNESPSLTTSNGNNSWLK 486

Query: 61  ALGDLTLQSPLVLKDFPVEMLNEGLSGYCHLSLCDKLRLLTFICDEVLSSEKVRSHIEKE 120
            L DL   S  +LKDFP++ L EG+ GY +L L  KL LL F+CDE L ++K+RS IE +
Sbjct: 487 PLEDLIAGSDHILKDFPLDWLQEGVGGYYNLDLSKKLTLLNFLCDEALITDKLRSCIEDQ 546

Query: 121 N 121
           N
Sbjct: 547 N 547