Miyakogusa Predicted Gene

Lj0g3v0248049.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0248049.1 Non Chatacterized Hit- tr|B4FYS0|B4FYS0_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,38.24,6e-17,seg,NULL,CUFF.16193.1
         (239 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g05160.1                                                       169   2e-42
Glyma19g27860.1                                                       166   3e-41
Glyma02g07380.1                                                        60   2e-09
Glyma16g26370.1                                                        55   6e-08

>Glyma16g05160.1 
          Length = 312

 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/198 (48%), Positives = 115/198 (58%), Gaps = 4/198 (2%)

Query: 44  HVLTQVLQPDPDSVREALATAKPTSATVTRLVSSYFDHSQNASHLCLLLCGSIHRARQIY 103
           HVL+QVLQPD  SVREALA AKP S  +TRLVS+YFDHS+ AS  CL L  S+HRAR +Y
Sbjct: 20  HVLSQVLQPDSHSVREALAKAKPKS-NLTRLVSTYFDHSETASDFCLRLSRSVHRARYLY 78

Query: 104 APLSDLIGIL---DPSSSLSQPQCDRAYDLFLQFDRHENPFLFPHFQDLRRSFSNLRSHI 160
           APLSDL+ +L    P  SLSQPQC+ AYDLFLQFDR ENPF       LR SFS+L+  I
Sbjct: 79  APLSDLLSVLPADAPLPSLSQPQCNHAYDLFLQFDREENPFALFRLHRLRDSFSDLKRDI 138

Query: 161 QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGFAAVALTPFCVPKS 220
           Q                                           VGF+A++  PFCVP+ 
Sbjct: 139 QRDLRKCHSRIRLFRHGAAGCALCFVAAAAGTVLVASIVAVHAVVGFSALSAAPFCVPRQ 198

Query: 221 ERKVRERLKQLDAAENGT 238
           +++   RLKQL+  ENGT
Sbjct: 199 KKRELARLKQLEVVENGT 216


>Glyma19g27860.1 
          Length = 378

 Score =  166 bits (419), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 96/198 (48%), Positives = 116/198 (58%), Gaps = 4/198 (2%)

Query: 44  HVLTQVLQPDPDSVREALATAKPTSATVTRLVSSYFDHSQNASHLCLLLCGSIHRARQIY 103
           HVL+QVLQPD  SV EALA AKP S  +TRLVS+YF HS+ AS  CL L  S+HRAR +Y
Sbjct: 95  HVLSQVLQPDSHSVHEALAKAKPKS-NLTRLVSTYFYHSETASDFCLRLSRSVHRARHLY 153

Query: 104 APLSDLIGILDPSSS--LSQPQCDRAYDLFLQFDRHENPFLFPHFQDLRRSFSNLRSHIQ 161
           APLSDL+ +L P+S+  LSQPQCDRAY+LFLQFDR ENPF       LR  FS+L+  IQ
Sbjct: 154 APLSDLLAVL-PASAPPLSQPQCDRAYELFLQFDREENPFALSRLHRLRDDFSDLKRDIQ 212

Query: 162 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGFAAVALTPFCVPKSE 221
                                                      VGF+A++  PFCV + +
Sbjct: 213 RDLRKCHSRIRLFRHSAAGCALCFVAVAAGTVVVASIVFVHAVVGFSALSAAPFCVTRQK 272

Query: 222 RKVRERLKQLDAAENGTL 239
           R+   RLKQL+A ENGTL
Sbjct: 273 RRELARLKQLEAVENGTL 290


>Glyma02g07380.1 
          Length = 287

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 2/83 (2%)

Query: 50  LQPDPDSVREALA-TAKPTSATVTRLVSSYFDHSQNASHLCLLLCGSIHRARQIYAPLSD 108
           L P  D V+EALA T  P    + RL+S++FDH++ AS+LCL     + RA  ++APL D
Sbjct: 52  LNPTRDRVQEALALTLTPIPTRLMRLISTFFDHTETASNLCLHFHHCLLRALDLHAPLLD 111

Query: 109 LIGILDPSSSLSQPQCDRAYDLF 131
               L+P++  +Q  C RA  LF
Sbjct: 112 FFQTLNPTNP-TQNDCVRAVRLF 133


>Glyma16g26370.1 
          Length = 311

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 4/92 (4%)

Query: 50  LQPDPDSVREALATAKPTSATVTRLVSSYFDHSQNASHLCLLLCGSIHRARQIYAPLSDL 109
           L P+ D V++AL T  PT   +TRL+S++FDH++ AS LCL L   + RAR ++APL D 
Sbjct: 42  LNPNRDRVQDAL-TLIPTR--LTRLISTFFDHTETASDLCLHLHQCLLRARDLHAPLLDF 98

Query: 110 IGILDPSSSLSQPQCDRAYDLFLQFDRHENPF 141
              L+P+   +Q  C RA  LF  F   +NP 
Sbjct: 99  FQTLNPTDP-TQNDCVRALRLFHPFHAFQNPI 129