Miyakogusa Predicted Gene

Lj0g3v0247689.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0247689.1 Non Chatacterized Hit- tr|K3XKC9|K3XKC9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si002352,48.05,0.000000000004,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.16201.1
         (106 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g06000.1                                                       111   1e-25
Glyma13g16690.1                                                       110   4e-25

>Glyma17g06000.1 
          Length = 304

 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/107 (60%), Positives = 70/107 (65%), Gaps = 12/107 (11%)

Query: 1   MGNGEVIQGDKVTGEGNLKKEGKSEPNGTXXXXXXXXXXXXXXXXXXXHPDGTLKMKKLR 60
           MGNGEVIQG+    E N KKEG +  N                     HPDG LKMKKLR
Sbjct: 209 MGNGEVIQGE----ESNFKKEGSAVKNKIKWKKFIKSALKS-------HPDGILKMKKLR 257

Query: 61  KAVFKALQESGIVVN-ETELSETLEQKINSSSRFAIENKYVRLVAKD 106
           K V KALQESGI V+ E ELSE LEQKINSSSRFA+ENKYVRL+AKD
Sbjct: 258 KVVLKALQESGIAVDDEAELSEALEQKINSSSRFAVENKYVRLLAKD 304


>Glyma13g16690.1 
          Length = 290

 Score =  110 bits (274), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 59/102 (57%), Positives = 69/102 (67%), Gaps = 7/102 (6%)

Query: 5   EVIQGDKVTGEGNLKKEGKSEPNGTXXXXXXXXXXXXXXXXXXXHPDGTLKMKKLRKAVF 64
           ++IQG++ TGE NLKKE  +  N                     HPD  LKMKKLRK V 
Sbjct: 196 DLIQGEEATGESNLKKERSAVKNKIKWKKFIKSALKS-------HPDRILKMKKLRKVVL 248

Query: 65  KALQESGIVVNETELSETLEQKINSSSRFAIENKYVRLVAKD 106
           +ALQE GIVV++TELSE LEQKINSSSRFA+ENKYVRL+AKD
Sbjct: 249 RALQECGIVVDDTELSEALEQKINSSSRFAVENKYVRLLAKD 290