Miyakogusa Predicted Gene
- Lj0g3v0246299.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0246299.1 Non Chatacterized Hit- tr|I1M710|I1M710_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10202
PE,86.39,0,WD40,WD40 repeat; WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; LISH,Li,CUFF.16091.1
(303 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g03550.2 442 e-124
Glyma14g03550.1 442 e-124
Glyma02g45200.1 439 e-123
Glyma08g41670.1 419 e-117
Glyma18g14400.2 410 e-115
Glyma18g14400.1 410 e-115
Glyma19g35380.1 194 1e-49
Glyma19g35380.2 145 7e-35
Glyma03g32630.1 74 2e-13
>Glyma14g03550.2
Length = 572
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/294 (76%), Positives = 242/294 (82%), Gaps = 2/294 (0%)
Query: 1 MGGVEDEEPALKRMKXXXXXXXXXXXXXXXXXXXXXFLSDSMARPLPSHGDEQVVGSKGV 60
MGGVEDEEP++KRMK SD MARPLPS GDE V GSKGV
Sbjct: 1 MGGVEDEEPSMKRMKLSSKGLVGLSNGSSKEPVGG-LSSDLMARPLPSKGDEHV-GSKGV 58
Query: 61 IKRDEFVRIIAKALYSLGYRKSGAHLEEESGIPLHSPGVNMFIQQILDGNWDDSIATLHT 120
IK++EFVRIIAKALYSLGY KSGAHLEEESGIPLHSPGVN+F+QQILDGNWDDS+ATL+
Sbjct: 59 IKKEEFVRIIAKALYSLGYGKSGAHLEEESGIPLHSPGVNLFMQQILDGNWDDSVATLYK 118
Query: 121 VGLADESVVRSASFLILEQKFFELLHAEKVMEALKTLRTEISPLSVYSNRIRELSSCIVS 180
+GLADES+VRSASFLILEQKFFELL+ EKVMEALKTLRTEI+PL + S+RIRELSSC+VS
Sbjct: 119 IGLADESMVRSASFLILEQKFFELLNGEKVMEALKTLRTEIAPLCINSSRIRELSSCLVS 178
Query: 181 PSPKQDILEVRSRSXXXXXXXXXXXXTVMIPEKRLEHLVEQALILQREACLFHNSLDKEM 240
S + DIL VRSRS TVMIPEKRLEHLVEQALILQREAC FHNSLDKEM
Sbjct: 179 ASSRLDILRVRSRSKLLEELQKLLPPTVMIPEKRLEHLVEQALILQREACPFHNSLDKEM 238
Query: 241 SLYSDHHCGKDQIPSKTLQILEAHDDEVWLVQFSHNGKYLASASNDRTAIIWEV 294
SLYSDHHCGKDQIPS TLQILEAHDDEVW VQFSHNGKYLASAS D+TAIIWEV
Sbjct: 239 SLYSDHHCGKDQIPSSTLQILEAHDDEVWFVQFSHNGKYLASASKDQTAIIWEV 292
>Glyma14g03550.1
Length = 572
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/294 (76%), Positives = 242/294 (82%), Gaps = 2/294 (0%)
Query: 1 MGGVEDEEPALKRMKXXXXXXXXXXXXXXXXXXXXXFLSDSMARPLPSHGDEQVVGSKGV 60
MGGVEDEEP++KRMK SD MARPLPS GDE V GSKGV
Sbjct: 1 MGGVEDEEPSMKRMKLSSKGLVGLSNGSSKEPVGG-LSSDLMARPLPSKGDEHV-GSKGV 58
Query: 61 IKRDEFVRIIAKALYSLGYRKSGAHLEEESGIPLHSPGVNMFIQQILDGNWDDSIATLHT 120
IK++EFVRIIAKALYSLGY KSGAHLEEESGIPLHSPGVN+F+QQILDGNWDDS+ATL+
Sbjct: 59 IKKEEFVRIIAKALYSLGYGKSGAHLEEESGIPLHSPGVNLFMQQILDGNWDDSVATLYK 118
Query: 121 VGLADESVVRSASFLILEQKFFELLHAEKVMEALKTLRTEISPLSVYSNRIRELSSCIVS 180
+GLADES+VRSASFLILEQKFFELL+ EKVMEALKTLRTEI+PL + S+RIRELSSC+VS
Sbjct: 119 IGLADESMVRSASFLILEQKFFELLNGEKVMEALKTLRTEIAPLCINSSRIRELSSCLVS 178
Query: 181 PSPKQDILEVRSRSXXXXXXXXXXXXTVMIPEKRLEHLVEQALILQREACLFHNSLDKEM 240
S + DIL VRSRS TVMIPEKRLEHLVEQALILQREAC FHNSLDKEM
Sbjct: 179 ASSRLDILRVRSRSKLLEELQKLLPPTVMIPEKRLEHLVEQALILQREACPFHNSLDKEM 238
Query: 241 SLYSDHHCGKDQIPSKTLQILEAHDDEVWLVQFSHNGKYLASASNDRTAIIWEV 294
SLYSDHHCGKDQIPS TLQILEAHDDEVW VQFSHNGKYLASAS D+TAIIWEV
Sbjct: 239 SLYSDHHCGKDQIPSSTLQILEAHDDEVWFVQFSHNGKYLASASKDQTAIIWEV 292
>Glyma02g45200.1
Length = 573
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/302 (74%), Positives = 243/302 (80%), Gaps = 1/302 (0%)
Query: 1 MGGVEDEEPALKRMKXXXXXXXXXXXXXXXXXXXXXFLSDSMARPLPSHGDEQVVGSKGV 60
MGGVEDEEP++KRMK SD MA+PL S DE VVGSKGV
Sbjct: 1 MGGVEDEEPSMKRMKLSSKGLVGLSNGSSKEPVRG-LSSDLMAQPLLSKEDEHVVGSKGV 59
Query: 61 IKRDEFVRIIAKALYSLGYRKSGAHLEEESGIPLHSPGVNMFIQQILDGNWDDSIATLHT 120
IK++EFVRIIAKALYSLGY KSGAHLEEESGIPL SPGVN+F QQILDGNWDDS+ATL+
Sbjct: 60 IKKEEFVRIIAKALYSLGYGKSGAHLEEESGIPLQSPGVNLFRQQILDGNWDDSVATLYK 119
Query: 121 VGLADESVVRSASFLILEQKFFELLHAEKVMEALKTLRTEISPLSVYSNRIRELSSCIVS 180
+GLADES+VRSASFLILEQKFFELL+ EKVMEALKTLRTEI+PL + ++RIRELSSC+VS
Sbjct: 120 IGLADESMVRSASFLILEQKFFELLNGEKVMEALKTLRTEIAPLCINNSRIRELSSCLVS 179
Query: 181 PSPKQDILEVRSRSXXXXXXXXXXXXTVMIPEKRLEHLVEQALILQREACLFHNSLDKEM 240
PSP+ DIL VRSRS TVMIPEKRLEHLVEQALILQ EAC FHNSLDKEM
Sbjct: 180 PSPRLDILRVRSRSKLLEELQKLLPPTVMIPEKRLEHLVEQALILQHEACPFHNSLDKEM 239
Query: 241 SLYSDHHCGKDQIPSKTLQILEAHDDEVWLVQFSHNGKYLASASNDRTAIIWEVIFDIEL 300
SLYSDHHCGKDQIPS TLQILEAHDDEVW VQFSHNGKYLASASNDRTAIIW V + L
Sbjct: 240 SLYSDHHCGKDQIPSSTLQILEAHDDEVWFVQFSHNGKYLASASNDRTAIIWVVGINGRL 299
Query: 301 IL 302
+
Sbjct: 300 TV 301
>Glyma08g41670.1
Length = 581
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/305 (71%), Positives = 241/305 (79%), Gaps = 5/305 (1%)
Query: 1 MGGVEDEEPALKRMKXXXXXXXXXXXXXXXXXXXXXFLSDSMARPLPSHGDEQVVGSKGV 60
MGGVEDEEPALKRMK SD MARPL S GD +V+GSKGV
Sbjct: 1 MGGVEDEEPALKRMKLSSKGLVGLSNGSSSVESVGGSSSDLMARPLSSEGDGEVIGSKGV 60
Query: 61 IKRDEFVRIIAKALYSLGYRKSGAHLEEESGIPLHSPGVNMFIQQILDGNWDDSIATLHT 120
IKR+EFVRII KALYSLGY+KSGA LEEESGIPLHS VN F+Q ILDG+WD+S+ATL+
Sbjct: 61 IKREEFVRIITKALYSLGYKKSGARLEEESGIPLHSSVVNQFMQHILDGHWDESVATLNK 120
Query: 121 VGLADESVVRSASFLILEQKFFELLHAEKVMEALKTLRTEISPLSVYSNRIRELSSCIVS 180
+GLADE+VVR+ASFLILEQKFFELL EKVM+ALKTLRTEI+PL S+RIRELSS ++S
Sbjct: 121 IGLADENVVRAASFLILEQKFFELLDGEKVMDALKTLRTEITPLCSDSSRIRELSSRMLS 180
Query: 181 P-----SPKQDILEVRSRSXXXXXXXXXXXXTVMIPEKRLEHLVEQALILQREACLFHNS 235
P S K+DI+ VRSRS TV+IPEKRLEHLVEQALILQREACLFHNS
Sbjct: 181 PCGQAGSSKRDIVLVRSRSKLLEELQKLLPPTVLIPEKRLEHLVEQALILQREACLFHNS 240
Query: 236 LDKEMSLYSDHHCGKDQIPSKTLQILEAHDDEVWLVQFSHNGKYLASASNDRTAIIWEVI 295
LDKEMSLYSDHHCGK QIPS+TLQILEAHDDEVW VQFSHNGKYLASASNDR+AIIWEV
Sbjct: 241 LDKEMSLYSDHHCGKTQIPSRTLQILEAHDDEVWYVQFSHNGKYLASASNDRSAIIWEVD 300
Query: 296 FDIEL 300
+ EL
Sbjct: 301 MNGEL 305
>Glyma18g14400.2
Length = 580
Score = 410 bits (1055), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/305 (70%), Positives = 239/305 (78%), Gaps = 6/305 (1%)
Query: 1 MGGVEDEEPALKRMKXXXXXXXXXXXXXXXXXXXXXFLSDSMARPLPSHGDEQVVGSKGV 60
MGGVEDE PALKRMK SD MARPL S GD +V+GSKGV
Sbjct: 1 MGGVEDEAPALKRMKLSSKGLVGLSNGSSGEPVGGSS-SDLMARPLSSEGDGEVIGSKGV 59
Query: 61 IKRDEFVRIIAKALYSLGYRKSGAHLEEESGIPLHSPGVNMFIQQILDGNWDDSIATLHT 120
IKR+EFVRII KALYSLGY+KSG LEEESGIPLHS VN+F+QQILDG+WD+SI TL+
Sbjct: 60 IKREEFVRIITKALYSLGYKKSGVRLEEESGIPLHSSVVNLFMQQILDGHWDESIVTLNK 119
Query: 121 VGLADESVVRSASFLILEQKFFELLHAEKVMEALKTLRTEISPLSVYSNRIRELSSCIVS 180
+GLADE+VV++ASFLILEQKFFELL EKVM+ALKTLRTEI+PL S+RIRELSS ++S
Sbjct: 120 IGLADENVVQAASFLILEQKFFELLDGEKVMDALKTLRTEITPLCSDSSRIRELSSRMLS 179
Query: 181 P-----SPKQDILEVRSRSXXXXXXXXXXXXTVMIPEKRLEHLVEQALILQREACLFHNS 235
P S K+DI+ VRSRS TV+IPEKRLEHLVEQAL+LQREACLFHNS
Sbjct: 180 PCGQVGSSKRDIVLVRSRSKLLEELQKLLPPTVLIPEKRLEHLVEQALVLQREACLFHNS 239
Query: 236 LDKEMSLYSDHHCGKDQIPSKTLQILEAHDDEVWLVQFSHNGKYLASASNDRTAIIWEVI 295
LDKEMSLYSDHHCGK QIPS+T QILEAHDDEVW VQFSHNGKYLASASNDR+AIIWEV
Sbjct: 240 LDKEMSLYSDHHCGKTQIPSRTSQILEAHDDEVWYVQFSHNGKYLASASNDRSAIIWEVD 299
Query: 296 FDIEL 300
+ EL
Sbjct: 300 MNGEL 304
>Glyma18g14400.1
Length = 580
Score = 410 bits (1055), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/305 (70%), Positives = 239/305 (78%), Gaps = 6/305 (1%)
Query: 1 MGGVEDEEPALKRMKXXXXXXXXXXXXXXXXXXXXXFLSDSMARPLPSHGDEQVVGSKGV 60
MGGVEDE PALKRMK SD MARPL S GD +V+GSKGV
Sbjct: 1 MGGVEDEAPALKRMKLSSKGLVGLSNGSSGEPVGGSS-SDLMARPLSSEGDGEVIGSKGV 59
Query: 61 IKRDEFVRIIAKALYSLGYRKSGAHLEEESGIPLHSPGVNMFIQQILDGNWDDSIATLHT 120
IKR+EFVRII KALYSLGY+KSG LEEESGIPLHS VN+F+QQILDG+WD+SI TL+
Sbjct: 60 IKREEFVRIITKALYSLGYKKSGVRLEEESGIPLHSSVVNLFMQQILDGHWDESIVTLNK 119
Query: 121 VGLADESVVRSASFLILEQKFFELLHAEKVMEALKTLRTEISPLSVYSNRIRELSSCIVS 180
+GLADE+VV++ASFLILEQKFFELL EKVM+ALKTLRTEI+PL S+RIRELSS ++S
Sbjct: 120 IGLADENVVQAASFLILEQKFFELLDGEKVMDALKTLRTEITPLCSDSSRIRELSSRMLS 179
Query: 181 P-----SPKQDILEVRSRSXXXXXXXXXXXXTVMIPEKRLEHLVEQALILQREACLFHNS 235
P S K+DI+ VRSRS TV+IPEKRLEHLVEQAL+LQREACLFHNS
Sbjct: 180 PCGQVGSSKRDIVLVRSRSKLLEELQKLLPPTVLIPEKRLEHLVEQALVLQREACLFHNS 239
Query: 236 LDKEMSLYSDHHCGKDQIPSKTLQILEAHDDEVWLVQFSHNGKYLASASNDRTAIIWEVI 295
LDKEMSLYSDHHCGK QIPS+T QILEAHDDEVW VQFSHNGKYLASASNDR+AIIWEV
Sbjct: 240 LDKEMSLYSDHHCGKTQIPSRTSQILEAHDDEVWYVQFSHNGKYLASASNDRSAIIWEVD 299
Query: 296 FDIEL 300
+ EL
Sbjct: 300 MNGEL 304
>Glyma19g35380.1
Length = 523
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/257 (41%), Positives = 152/257 (59%), Gaps = 8/257 (3%)
Query: 53 QVVGSKGVIKRDEFVRIIAKALYSLGYRKSGAHLEEESGIPLHSPGVNMFIQQILDGNWD 112
+V+GSKG+I+R EFVRII + LYSLGY S + LE ESGI S V + IL+G+WD
Sbjct: 6 EVLGSKGLIRRHEFVRIIIQCLYSLGYSSSASCLESESGISYKSNEVKLLESLILNGSWD 65
Query: 113 DSIATLHTVGLADESVVRSASFLILEQKFFELLHAEKVMEALKTLRTEISPLSVYSNRIR 172
+SI L+++ SA FL+ Q E L+ + AL LR ++S L ++
Sbjct: 66 ESIDYLNSIKDELGETRESALFLVFRQCVMEYLNCGEYALALGVLRKQVSALDAGKCKVH 125
Query: 173 ELSSCIVSPSPKQ-------DILEVRSRSXXXXXXXXXXXXTVMIPEKRLEHLVEQALIL 225
+ C++S ++ D++ R + +PE RLEHLVE ++
Sbjct: 126 SFAKCLLSFKDRELGAVDGGDVVVHDLRKKLLADLEKLFPPPISVPEGRLEHLVENTVMS 185
Query: 226 QREACLFHNSLDKEMSLYSDHHCGKDQIPSKTLQILEAHDDEVWLVQFSHNGKYLASASN 285
++C++H+S +SLY DHHC +DQIP+ T QIL H +EVW VQFS+NG+YLAS+SN
Sbjct: 186 WVDSCMYHSS-SSPISLYEDHHCSRDQIPTTTTQILTGHKNEVWFVQFSNNGEYLASSSN 244
Query: 286 DRTAIIWEVIFDIELIL 302
D TAIIW+V+ D +L L
Sbjct: 245 DCTAIIWKVLEDGKLTL 261
>Glyma19g35380.2
Length = 462
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 130/251 (51%), Gaps = 57/251 (22%)
Query: 53 QVVGSKGVIKRDEFVRIIAKALYSLGYRKSGAHLEEESGIPLHSPGVNMFIQQILDGNWD 112
+V+GSKG+I+R EFVRII + LYSLGY S + LE ESGI S V + IL+G+WD
Sbjct: 6 EVLGSKGLIRRHEFVRIIIQCLYSLGYSSSASCLESESGISYKSNEVKLLESLILNGSWD 65
Query: 113 DSIATLHTVGLADE-SVVRSASFLILEQKFFELLHAEKVMEALKTLRTEISPLSVYSNRI 171
+SI L+++ DE V ++ + + L EK+ P+SV R+
Sbjct: 66 ESIDYLNSI--KDELGAVDGGDVVVHDLRKKLLADLEKLFPP---------PISVPEGRL 114
Query: 172 RELSSCIVSPSPKQDILEVRSRSXXXXXXXXXXXXTVMIPEKRLEHLVEQALILQREACL 231
L VE ++ ++C+
Sbjct: 115 EHL--------------------------------------------VENTVMSWVDSCM 130
Query: 232 FHNSLDKEMSLYSDHHCGKDQIPSKTLQILEAHDDEVWLVQFSHNGKYLASASNDRTAII 291
+H+S +SLY DHHC +DQIP+ T QIL H +EVW VQFS+NG+YLAS+SND TAII
Sbjct: 131 YHSS-SSPISLYEDHHCSRDQIPTTTTQILTGHKNEVWFVQFSNNGEYLASSSNDCTAII 189
Query: 292 WEVIFDIELIL 302
W+V+ D +L L
Sbjct: 190 WKVLEDGKLTL 200
>Glyma03g32630.1
Length = 432
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 143 ELLHAEKVMEALKTLRTEISPLSVYSNRIRELSSCIVSPSPKQDILEVRSRSXXXXXXXX 202
E L+ + AL LR ++S L V ++ L+ C++S + +++ V
Sbjct: 2 EYLNCGEDALALGVLRKQVSALDVDKCKVHSLAKCLLSFNKDRELGAVDGGDVVVVVHDL 61
Query: 203 XXXXT----------VMIPEKRLEHLVEQALILQREACLFHNS--LDKEMSLYSDHHCGK 250
V +PE RLEHLVE ++ ++C++H + +
Sbjct: 62 LKKLLEDLEKLFPPPVSVPEGRLEHLVESTVMSWVDSCMYHRMRIITAAGIRFLLQRLSH 121
Query: 251 DQIPSKTLQILEAHDDEVWLVQFSHNGKYLASASNDRTAIIWEVIFDIELIL 302
+ IL H +EVW VQFS+NG+YL S+SND TAIIW+V+ D +L L
Sbjct: 122 ESFLIYQGLILTGHKNEVWFVQFSNNGEYLVSSSNDCTAIIWKVLEDGKLTL 173