Miyakogusa Predicted Gene
- Lj0g3v0246179.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0246179.1 Non Chatacterized Hit- tr|I1MCM5|I1MCM5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.81,0,COATOMER BETA
SUBUNIT,NULL; COATOMER,NULL; seg,NULL; coiled-coil,NULL;
Coatomer_WDAD,Coatomer, WD as,CUFF.16123.1
(298 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g43690.1 447 e-126
Glyma13g43680.1 426 e-119
Glyma15g01680.1 423 e-118
Glyma07g03890.2 421 e-118
Glyma07g03890.1 421 e-118
Glyma08g22140.1 415 e-116
Glyma13g43680.2 409 e-114
Glyma07g20150.1 87 2e-17
Glyma01g07970.1 82 6e-16
Glyma18g24270.1 78 9e-15
Glyma18g37700.1 76 5e-14
Glyma04g12400.1 75 1e-13
Glyma11g30520.1 60 4e-09
Glyma01g12330.1 54 3e-07
Glyma19g26060.1 52 7e-07
>Glyma13g43690.1
Length = 525
Score = 447 bits (1151), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/299 (77%), Positives = 244/299 (81%), Gaps = 10/299 (3%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAEEC 60
MIEDALEVATDPDYRFDLAIQLG+L+VAKSIAIE+QSE KWKQLGELAMSTGKLEMAEEC
Sbjct: 236 MIEDALEVATDPDYRFDLAIQLGKLDVAKSIAIELQSEPKWKQLGELAMSTGKLEMAEEC 295
Query: 61 LKHAKDXXXXXXXXXXXXDAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 120
LK+A D DAEGIS LA LAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN
Sbjct: 296 LKYAMDLSGLLLLYSSLGDAEGISKLAILAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 355
Query: 121 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 180
RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLA+PEEYPNLFEDWQVALAVES
Sbjct: 356 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLANPEEYPNLFEDWQVALAVES 415
Query: 181 KAIETRNVYPPAEQYISHADKSHVTLVEAFRNMQIEE-EEPLENGDSNYXXXXXXXXXXX 239
KA+ETRNVYPPAEQY++HADKSH+TLVEAFR+MQIEE EE LENGDS +
Sbjct: 416 KAVETRNVYPPAEQYVNHADKSHITLVEAFRSMQIEEGEEHLENGDSTH---------EL 466
Query: 240 XXXXXXXXXXXXXXXXXXXXXXXXXAVVVDAESTDGAVLVNGNEADEEWGTNNEGAPSA 298
AVVVDA+STDGAVLVNGNEADEEWGTNNEGAPSA
Sbjct: 467 TERNGEEHYTEEQEEQNGEEGSQEEAVVVDADSTDGAVLVNGNEADEEWGTNNEGAPSA 525
>Glyma13g43680.1
Length = 916
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/289 (76%), Positives = 234/289 (80%), Gaps = 10/289 (3%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAEEC 60
MIEDALEVATDPDYRFDLAIQLG+L+VAKSIAIE+QSE KWKQLGELAMSTGKLEMAEEC
Sbjct: 631 MIEDALEVATDPDYRFDLAIQLGKLDVAKSIAIELQSEPKWKQLGELAMSTGKLEMAEEC 690
Query: 61 LKHAKDXXXXXXXXXXXXDAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 120
LK+A D DAEGIS LA LAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN
Sbjct: 691 LKYAMDLSGLLLLYSSLGDAEGISKLAILAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 750
Query: 121 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 180
RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLA+PEEYPNLFEDWQVALAVES
Sbjct: 751 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLANPEEYPNLFEDWQVALAVES 810
Query: 181 KAIETRNVYPPAEQYISHADKSHVTLVEAFRNMQIEE-EEPLENGDSNYXXXXXXXXXXX 239
KA+ETRNVYPPAEQY++HADKSH+TLVEAFR+MQIEE EE LENGDS +
Sbjct: 811 KAVETRNVYPPAEQYVNHADKSHITLVEAFRSMQIEEGEEHLENGDSTH---------EL 861
Query: 240 XXXXXXXXXXXXXXXXXXXXXXXXXAVVVDAESTDGAVLVNGNEADEEW 288
AVVVDA+STDGAVLVNGNEADEEW
Sbjct: 862 TERNGEEHYTEEQEEQNGEEGSQEEAVVVDADSTDGAVLVNGNEADEEW 910
>Glyma15g01680.1
Length = 917
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/289 (76%), Positives = 232/289 (80%), Gaps = 10/289 (3%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAEEC 60
MIEDALEVATDP+YRFDL+IQLG+L+VAKSIAIE+QSE KWKQLGEL MSTGKLEMAEEC
Sbjct: 631 MIEDALEVATDPEYRFDLSIQLGKLDVAKSIAIELQSEPKWKQLGELTMSTGKLEMAEEC 690
Query: 61 LKHAKDXXXXXXXXXXXXDAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 120
LK+A D DAEGIS LA LAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN
Sbjct: 691 LKYAMDLSGLLLLYSSLGDAEGISKLAILAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 750
Query: 121 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 180
RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES
Sbjct: 751 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 810
Query: 181 KAIETRNVYPPAEQYISHADKSHVTLVEAFRNMQIEE-EEPLENGDSNYXXXXXXXXXXX 239
KA+ETRNVYPPAEQY++HADKS +TLVEAFRNMQIEE EE LENGDS +
Sbjct: 811 KAVETRNVYPPAEQYVNHADKSQITLVEAFRNMQIEEGEEHLENGDSTH---------EL 861
Query: 240 XXXXXXXXXXXXXXXXXXXXXXXXXAVVVDAESTDGAVLVNGNEADEEW 288
AVVVDA+STDGAVLVNGNEADEEW
Sbjct: 862 TEQSGEEHYTEDQEEQNGEEGSQEEAVVVDADSTDGAVLVNGNEADEEW 910
>Glyma07g03890.2
Length = 471
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/288 (76%), Positives = 230/288 (79%), Gaps = 7/288 (2%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAEEC 60
MIEDALEVATDPDYRFDLAIQLGRLEVAK IA EVQSESKWKQLGELAMSTGKLEMAEEC
Sbjct: 190 MIEDALEVATDPDYRFDLAIQLGRLEVAKGIASEVQSESKWKQLGELAMSTGKLEMAEEC 249
Query: 61 LKHAKDXXXXXXXXXXXXDAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 120
LKHA D DAEGIS LATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN
Sbjct: 250 LKHATDLSGLLLLYSSLGDAEGISKLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 309
Query: 121 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 180
RIPEAALMARSYLPSKVSEIVAIWRKDL+KVNPKAAESLADPEEYPNLF+DWQVALAVES
Sbjct: 310 RIPEAALMARSYLPSKVSEIVAIWRKDLSKVNPKAAESLADPEEYPNLFDDWQVALAVES 369
Query: 181 KAIETRNVYPPAEQYISHADKSHVTLVEAFRNMQIEE-EEPLENGDSNYXXXXXXXXXXX 239
KA E R VYPPA +Y++ ADKSH+TLVEAFRNMQIEE ++PLENGDSN+
Sbjct: 370 KATEARGVYPPASEYVNQADKSHITLVEAFRNMQIEEGDQPLENGDSNH------ELTEQ 423
Query: 240 XXXXXXXXXXXXXXXXXXXXXXXXXAVVVDAESTDGAVLVNGNEADEE 287
AVVVDA+STDGAVLVNGNEADEE
Sbjct: 424 NGEEHYTEEHEEHEEQNGEEGSQEEAVVVDADSTDGAVLVNGNEADEE 471
>Glyma07g03890.1
Length = 912
Score = 421 bits (1081), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/288 (76%), Positives = 230/288 (79%), Gaps = 7/288 (2%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAEEC 60
MIEDALEVATDPDYRFDLAIQLGRLEVAK IA EVQSESKWKQLGELAMSTGKLEMAEEC
Sbjct: 631 MIEDALEVATDPDYRFDLAIQLGRLEVAKGIASEVQSESKWKQLGELAMSTGKLEMAEEC 690
Query: 61 LKHAKDXXXXXXXXXXXXDAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 120
LKHA D DAEGIS LATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN
Sbjct: 691 LKHATDLSGLLLLYSSLGDAEGISKLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 750
Query: 121 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 180
RIPEAALMARSYLPSKVSEIVAIWRKDL+KVNPKAAESLADPEEYPNLF+DWQVALAVES
Sbjct: 751 RIPEAALMARSYLPSKVSEIVAIWRKDLSKVNPKAAESLADPEEYPNLFDDWQVALAVES 810
Query: 181 KAIETRNVYPPAEQYISHADKSHVTLVEAFRNMQIEE-EEPLENGDSNYXXXXXXXXXXX 239
KA E R VYPPA +Y++ ADKSH+TLVEAFRNMQIEE ++PLENGDSN+
Sbjct: 811 KATEARGVYPPASEYVNQADKSHITLVEAFRNMQIEEGDQPLENGDSNH------ELTEQ 864
Query: 240 XXXXXXXXXXXXXXXXXXXXXXXXXAVVVDAESTDGAVLVNGNEADEE 287
AVVVDA+STDGAVLVNGNEADEE
Sbjct: 865 NGEEHYTEEHEEHEEQNGEEGSQEEAVVVDADSTDGAVLVNGNEADEE 912
>Glyma08g22140.1
Length = 905
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/288 (75%), Positives = 227/288 (78%), Gaps = 14/288 (4%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAEEC 60
MIEDALEVATDPDYRFDLAIQLGRLEVAK IA EV SESKWKQLGELAMSTGKLEMAEEC
Sbjct: 631 MIEDALEVATDPDYRFDLAIQLGRLEVAKGIATEVHSESKWKQLGELAMSTGKLEMAEEC 690
Query: 61 LKHAKDXXXXXXXXXXXXDAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 120
LK A D DAEGIS LATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN
Sbjct: 691 LKQAMDLSGLLLLYSSLGDAEGISKLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 750
Query: 121 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 180
RIPEAALMARSYLPSKVSEIVAIWRKDL+KVNPKAAESLADPEEYPNLF+DWQVALAVES
Sbjct: 751 RIPEAALMARSYLPSKVSEIVAIWRKDLSKVNPKAAESLADPEEYPNLFDDWQVALAVES 810
Query: 181 KAIETRNVYPPAEQYISHADKSHVTLVEAFRNMQIEE-EEPLENGDSNYXXXXXXXXXXX 239
KA ETR +Y PA +Y+ ADKSH+TLVEAFRNMQIEE ++PLENGDSN+
Sbjct: 811 KATETRGIYSPASEYVKQADKSHITLVEAFRNMQIEEGDQPLENGDSNH----------- 859
Query: 240 XXXXXXXXXXXXXXXXXXXXXXXXXAVVVDAESTDGAVLVNGNEADEE 287
AVVVDA+STDGAVLVNGNEADEE
Sbjct: 860 --ELTEQNGEEHYTEEQNGEGSQEEAVVVDADSTDGAVLVNGNEADEE 905
>Glyma13g43680.2
Length = 908
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/281 (76%), Positives = 226/281 (80%), Gaps = 10/281 (3%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAEEC 60
MIEDALEVATDPDYRFDLAIQLG+L+VAKSIAIE+QSE KWKQLGELAMSTGKLEMAEEC
Sbjct: 631 MIEDALEVATDPDYRFDLAIQLGKLDVAKSIAIELQSEPKWKQLGELAMSTGKLEMAEEC 690
Query: 61 LKHAKDXXXXXXXXXXXXDAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 120
LK+A D DAEGIS LA LAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN
Sbjct: 691 LKYAMDLSGLLLLYSSLGDAEGISKLAILAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 750
Query: 121 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 180
RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLA+PEEYPNLFEDWQVALAVES
Sbjct: 751 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLANPEEYPNLFEDWQVALAVES 810
Query: 181 KAIETRNVYPPAEQYISHADKSHVTLVEAFRNMQIEE-EEPLENGDSNYXXXXXXXXXXX 239
KA+ETRNVYPPAEQY++HADKSH+TLVEAFR+MQIEE EE LENGDS +
Sbjct: 811 KAVETRNVYPPAEQYVNHADKSHITLVEAFRSMQIEEGEEHLENGDSTH---------EL 861
Query: 240 XXXXXXXXXXXXXXXXXXXXXXXXXAVVVDAESTDGAVLVN 280
AVVVDA+STDGAVLVN
Sbjct: 862 TERNGEEHYTEEQEEQNGEEGSQEEAVVVDADSTDGAVLVN 902
>Glyma07g20150.1
Length = 136
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 50/61 (81%), Gaps = 3/61 (4%)
Query: 101 LCLFMLGKLEDCLQLLVE-SNRIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESL 159
LC+FMLGKLEDCLQLLVE NRIPEAALMARSYLPSKV +V IWRKD +K+ + A L
Sbjct: 75 LCVFMLGKLEDCLQLLVERGNRIPEAALMARSYLPSKV--LVTIWRKDFSKIIVQLAIDL 132
Query: 160 A 160
A
Sbjct: 133 A 133
>Glyma01g07970.1
Length = 537
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 40/41 (97%)
Query: 79 DAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVES 119
DAEGIS LATLAKE+GKNNVAFLCLFMLGKLEDCLQLLVES
Sbjct: 485 DAEGISKLATLAKEEGKNNVAFLCLFMLGKLEDCLQLLVES 525
>Glyma18g24270.1
Length = 222
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 44/49 (89%), Gaps = 3/49 (6%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAM 49
MIEDALEVA DPDY FDLAIQLG+L+VAKSIAIE+QSE +QLGELAM
Sbjct: 121 MIEDALEVAIDPDYIFDLAIQLGKLDVAKSIAIELQSE---QQLGELAM 166
>Glyma18g37700.1
Length = 253
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 5/61 (8%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKW-----KQLGELAMSTGKLE 55
MIEDALEVATDPDYRFDLAIQLG+L+VAKSIAIE+QSE + QL + G+++
Sbjct: 139 MIEDALEVATDPDYRFDLAIQLGKLDVAKSIAIELQSERFFLSNLNLQLDYTGFTYGQIK 198
Query: 56 M 56
+
Sbjct: 199 I 199
>Glyma04g12400.1
Length = 45
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 41/47 (87%), Gaps = 3/47 (6%)
Query: 105 MLGKLEDCLQLLVE-SNRIPEAALMARSYLPSKVSEIVAIWRKDLNK 150
MLGKLEDCLQLLVE NRIPEAALMARSYLPS +S V IWRKDL+K
Sbjct: 1 MLGKLEDCLQLLVERGNRIPEAALMARSYLPSMIS--VTIWRKDLSK 45
>Glyma11g30520.1
Length = 262
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 31/33 (93%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAI 33
MIEDAL+VATDPDYRFDLAIQLG+L+VAK + +
Sbjct: 186 MIEDALKVATDPDYRFDLAIQLGKLDVAKEVIL 218
>Glyma01g12330.1
Length = 38
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/26 (92%), Positives = 26/26 (100%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLE 26
MIEDALEVATDPDYRFDLAIQLG+L+
Sbjct: 13 MIEDALEVATDPDYRFDLAIQLGKLD 38
>Glyma19g26060.1
Length = 209
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 32/48 (66%), Gaps = 6/48 (12%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLE------VAKSIAIEVQSESKWK 42
MIEDALEV TDPDYRFDL IQLG+L+ +A+ A+ S WK
Sbjct: 98 MIEDALEVPTDPDYRFDLPIQLGKLDAKYCNRIAERAAVGRISYVYWK 145