Miyakogusa Predicted Gene
- Lj0g3v0245729.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0245729.1 Non Chatacterized Hit- tr|I1IST8|I1IST8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,28.88,5e-18,FAMILY NOT NAMED,NULL; coiled-coil,NULL,CUFF.16065.1
(420 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g11930.1 739 0.0
Glyma02g25230.1 718 0.0
Glyma01g00420.1 90 6e-18
Glyma04g34790.2 65 1e-10
Glyma04g34790.1 65 1e-10
Glyma06g19940.2 65 1e-10
Glyma06g19940.1 65 1e-10
Glyma05g01680.5 64 2e-10
Glyma05g01680.4 64 2e-10
Glyma05g01680.3 64 2e-10
Glyma05g01680.2 64 2e-10
Glyma05g01680.1 64 2e-10
Glyma17g10200.1 64 3e-10
Glyma01g04500.1 64 4e-10
Glyma02g03050.1 61 3e-09
>Glyma18g11930.1
Length = 881
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/420 (84%), Positives = 384/420 (91%), Gaps = 4/420 (0%)
Query: 3 ANDTDDRIENDQ--SSANLAGFSKTDGQSEVSFSNNRGNWVAIQRQLMQMERQQVHLMNM 60
+N ENDQ SAN AGFSKTDGQSEV FSNNR NW+AIQRQL+Q+ERQQVHLMNM
Sbjct: 464 SNSLKGETENDQRDGSANAAGFSKTDGQSEVPFSNNRANWLAIQRQLLQLERQQVHLMNM 523
Query: 61 LQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRGNNFTGFEGSSSRPSSKYNG 120
LQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRR NF GFEGSS+RPSSKYNG
Sbjct: 524 LQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRR--NFAGFEGSSNRPSSKYNG 581
Query: 121 FNDYSSAKYGRGGDGRIQFGERFAQSDGNALGMRGRGPSWRSDMSDGWDFSGYGASRNGQ 180
FNDYSS+KYGRGGDGRI FGERFAQSDGN+LGMRGRGPSWRSDMS+GWD SGYGASRNGQ
Sbjct: 582 FNDYSSSKYGRGGDGRIPFGERFAQSDGNSLGMRGRGPSWRSDMSEGWDHSGYGASRNGQ 641
Query: 181 ISSRRAFTGSSADGRSPKSAHESDQGGSRRAWEKAAMPIRLGEGPSARSVWQASKDEATL 240
+SSRRAF GSSADGRSPKS HE+DQ G+RRAW+KAAMPIRLGEGPSARSVWQASKDEATL
Sbjct: 642 MSSRRAFGGSSADGRSPKSVHENDQAGNRRAWDKAAMPIRLGEGPSARSVWQASKDEATL 701
Query: 241 EAIRIAGEDNGTSRATRVAIPEMTAEAMTDDNVGKDREAIWTSWSNAMDALQAGDVDSAF 300
EAIR+AGEDNGTSRATRVAIPEMTAEAM DDNVG++R+AIWTSWSNAMDALQ GD+DSAF
Sbjct: 702 EAIRVAGEDNGTSRATRVAIPEMTAEAMADDNVGQERDAIWTSWSNAMDALQVGDLDSAF 761
Query: 301 AEVSSTGDDLLLLKLMDRTGPVIDQLSNEVACEVLYTIGQFLLEPNLYGICLSWIQQLLE 360
AEV S GDD+LL+KLMD+TGPVIDQLS+EVACE + IGQFLL+ N+Y ICLSWIQQ+LE
Sbjct: 762 AEVLSAGDDILLVKLMDKTGPVIDQLSSEVACETVNAIGQFLLDQNMYDICLSWIQQVLE 821
Query: 361 IVLENGPDTFGVSLEVKKDLLLNLHEASTDTTEDWEGVPPHQLLLQLASAWEIDLQQHDK 420
IVLENGPDTF + +EVKK+LLLNLHEASTD E WEGV P QLLLQLASAWEIDLQQHDK
Sbjct: 822 IVLENGPDTFDIPMEVKKELLLNLHEASTDPAETWEGVQPDQLLLQLASAWEIDLQQHDK 881
>Glyma02g25230.1
Length = 877
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/421 (83%), Positives = 378/421 (89%), Gaps = 18/421 (4%)
Query: 2 KANDTDDRIENDQ--SSANLAGFSKTDGQSEVSFSNNRGNWVAIQRQLMQMERQQVHLMN 59
KA DTDDR ENDQ SAN++GFSK DGQSEV FSNNRGNW+AIQRQL+Q+ERQQVHLMN
Sbjct: 473 KAYDTDDRTENDQREGSANVSGFSKIDGQSEVPFSNNRGNWLAIQRQLLQLERQQVHLMN 532
Query: 60 MLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRGNNFTGFEGSSSRPSSKYN 119
MLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRR NF GFEGSS+RPSSK
Sbjct: 533 MLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRR--NFAGFEGSSNRPSSK-- 588
Query: 120 GFNDYSSAKYGRGGDGRIQFGERFAQSDGNALGMRGRGPSWRSDMSDGWDFSGYGASRNG 179
GGDGRI FGERFAQSDGNALGMRGRGPSWRSDMS+GWD GYGASRNG
Sbjct: 589 ------------GGDGRIPFGERFAQSDGNALGMRGRGPSWRSDMSEGWDHPGYGASRNG 636
Query: 180 QISSRRAFTGSSADGRSPKSAHESDQGGSRRAWEKAAMPIRLGEGPSARSVWQASKDEAT 239
Q+SSRRAF GSSADGRSPKS HESDQ G+RRAW+KAAMPIRLGEGPSARSVWQASKDEAT
Sbjct: 637 QMSSRRAFGGSSADGRSPKSVHESDQAGNRRAWDKAAMPIRLGEGPSARSVWQASKDEAT 696
Query: 240 LEAIRIAGEDNGTSRATRVAIPEMTAEAMTDDNVGKDREAIWTSWSNAMDALQAGDVDSA 299
LEAIR+AGEDNGTSRATRVAIPEMTAEAM DDNVG++++AIWTSW+NAMDALQ GD+DSA
Sbjct: 697 LEAIRVAGEDNGTSRATRVAIPEMTAEAMADDNVGQEKDAIWTSWTNAMDALQVGDIDSA 756
Query: 300 FAEVSSTGDDLLLLKLMDRTGPVIDQLSNEVACEVLYTIGQFLLEPNLYGICLSWIQQLL 359
FAEV STGDD+LL+K+MDRTGPVIDQLS+EVACE++ IGQFLL+ N+Y ICLSWIQQLL
Sbjct: 757 FAEVLSTGDDILLVKIMDRTGPVIDQLSSEVACEIVNAIGQFLLDQNMYDICLSWIQQLL 816
Query: 360 EIVLENGPDTFGVSLEVKKDLLLNLHEASTDTTEDWEGVPPHQLLLQLASAWEIDLQQHD 419
EIVLENGPDTFG+ +EVKK+LLLNLHEASTD E WEGV P QLLLQLASAWEIDLQQHD
Sbjct: 817 EIVLENGPDTFGIPMEVKKELLLNLHEASTDPAEAWEGVQPDQLLLQLASAWEIDLQQHD 876
Query: 420 K 420
K
Sbjct: 877 K 877
>Glyma01g00420.1
Length = 805
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 171/387 (44%), Gaps = 68/387 (17%)
Query: 6 TDDRIENDQSSANLAGFSKTDGQSEVSFSNNRGN-WVAIQRQLMQMERQQVHLMNMLQDF 64
+D+R++ +++ + ++ Q+ N + IQ QL +E +Q ++M+ LQ F
Sbjct: 451 SDERVKMQHPTSSDSTVTEPTHQTAHECCMQMANEMICIQNQLSDIEIKQANMMHQLQMF 510
Query: 65 MGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRGNNFTGFEGSSSRPSSKYNGFNDY 124
G D++ T+++R+ GL E++ LS S +RG + Y
Sbjct: 511 TTGIMDALSTIQSRITGL----ENVFDRLSQESLQRGR-------------------HSY 547
Query: 125 S-SAKYGRGGDGRIQFGERFAQSDGNALGMRGRGPSWRSDMSDGWDFSGYGASRNGQISS 183
S ++K GR + RF+ P+ R + S + +N +
Sbjct: 548 SENSKLGRQSENVA--SPRFSIC----------TPTPRPSVEINNKQSDSMSVKNSESWE 595
Query: 184 RRAFTGSSADGRSPKSAHESDQGGSRRAWE--KAAMPIRLGEGPSARSVWQASKDEATLE 241
++AF+ RS H G S W+ K + E S +SKD +
Sbjct: 596 KKAFS------RSQPRIHS---GDSLDMWKSNKVKATRKFTEKDVLNS---SSKDTLQMG 643
Query: 242 AIRIAGEDNGTSRATRVAIPEMTAEAMTDDNVGKD-REAIWTSWSNAMDALQAGDVDSAF 300
+++ ++G ATR+ N D E+ W + + GD++SA+
Sbjct: 644 SVK----NDGIFSATRIT------------NARNDCSESNNNYWKHVKRLVCEGDLNSAY 687
Query: 301 AEVSSTGDDLLLLKLMDRTGPVIDQLSNEVACEVLYTIGQFLLEPNLYGICLSWIQQLLE 360
E D+ +L++L++ TGPVI+ LS + +L T+ +LLE L+ + W+QQ++E
Sbjct: 688 REALCFSDEFILVELLNTTGPVIESLSVKTMNVLLSTLASYLLEGKLFNTIIPWLQQIVE 747
Query: 361 IVLENGPDTFGVSLEVKKDLLLNLHEA 387
+ +GP+ +S+E KK LL + EA
Sbjct: 748 MSTIHGPNCIAISIEAKKHLLSAVQEA 774
>Glyma04g34790.2
Length = 568
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 43 IQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRGN 102
I+ QL+Q+E+QQ L++++Q FMG S + M TLE RV GLE ++++S DL++SSGR
Sbjct: 413 IRAQLVQIEKQQSSLLDLVQKFMGNSENGMHTLETRVHGLELALDEISYDLAVSSGRISK 472
Query: 103 N---------FTGFEGSSSRPSSKYNGFNDYSSAKYGRGG 133
+ G E S++ K G YSS ++ R G
Sbjct: 473 SDAPKNTCCLLPGAEFLSTKFWKKTQG--RYSSYRFSRTG 510
>Glyma04g34790.1
Length = 622
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 43 IQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRGN 102
I+ QL+Q+E+QQ L++++Q FMG S + M TLE RV GLE ++++S DL++SSGR
Sbjct: 467 IRAQLVQIEKQQSSLLDLVQKFMGNSENGMHTLETRVHGLELALDEISYDLAVSSGRISK 526
Query: 103 N---------FTGFEGSSSRPSSKYNGFNDYSSAKYGRGG 133
+ G E S++ K G YSS ++ R G
Sbjct: 527 SDAPKNTCCLLPGAEFLSTKFWKKTQG--RYSSYRFSRTG 564
>Glyma06g19940.2
Length = 623
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 43 IQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGR--- 99
I+ QL+Q+E+QQ L++++Q FMG S + M TLE RV GLE ++++S DL++SSGR
Sbjct: 468 IRAQLVQIEKQQSSLLDLVQKFMGSSENGMRTLETRVHGLELALDEISYDLAVSSGRITK 527
Query: 100 ------RGNNFTGFEGSSSRPSSKYNGFNDYSSAKYGRGG 133
G E SS+ K G YSS ++ R G
Sbjct: 528 FDAPKHTCCMLPGAEFLSSKFWKKTQG--RYSSYRFSRTG 565
>Glyma06g19940.1
Length = 623
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 43 IQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGR--- 99
I+ QL+Q+E+QQ L++++Q FMG S + M TLE RV GLE ++++S DL++SSGR
Sbjct: 468 IRAQLVQIEKQQSSLLDLVQKFMGSSENGMRTLETRVHGLELALDEISYDLAVSSGRITK 527
Query: 100 ------RGNNFTGFEGSSSRPSSKYNGFNDYSSAKYGRGG 133
G E SS+ K G YSS ++ R G
Sbjct: 528 FDAPKHTCCMLPGAEFLSSKFWKKTQG--RYSSYRFSRTG 565
>Glyma05g01680.5
Length = 611
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 19/112 (16%)
Query: 43 IQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGR--- 99
I+ QL Q+E QQ L+++LQ FMG S + M +LE RV GLE ++++S DL+ISSGR
Sbjct: 462 IRDQLHQIENQQSSLLDLLQKFMGSSQNGMRSLETRVHGLELALDEISYDLAISSGRMTK 521
Query: 100 ---RGNNFTGFEGSSSRPSSKYNGFNDYSSAKYGRGGDGRIQFGERFAQSDG 148
GN G+ ++ S+K+ R GR RF++S G
Sbjct: 522 PDPHGNTCCMLPGA------------EFLSSKFWRKTHGRDSI-TRFSRSGG 560
>Glyma05g01680.4
Length = 611
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 19/112 (16%)
Query: 43 IQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGR--- 99
I+ QL Q+E QQ L+++LQ FMG S + M +LE RV GLE ++++S DL+ISSGR
Sbjct: 462 IRDQLHQIENQQSSLLDLLQKFMGSSQNGMRSLETRVHGLELALDEISYDLAISSGRMTK 521
Query: 100 ---RGNNFTGFEGSSSRPSSKYNGFNDYSSAKYGRGGDGRIQFGERFAQSDG 148
GN G+ ++ S+K+ R GR RF++S G
Sbjct: 522 PDPHGNTCCMLPGA------------EFLSSKFWRKTHGRDSI-TRFSRSGG 560
>Glyma05g01680.3
Length = 611
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 19/112 (16%)
Query: 43 IQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGR--- 99
I+ QL Q+E QQ L+++LQ FMG S + M +LE RV GLE ++++S DL+ISSGR
Sbjct: 462 IRDQLHQIENQQSSLLDLLQKFMGSSQNGMRSLETRVHGLELALDEISYDLAISSGRMTK 521
Query: 100 ---RGNNFTGFEGSSSRPSSKYNGFNDYSSAKYGRGGDGRIQFGERFAQSDG 148
GN G+ ++ S+K+ R GR RF++S G
Sbjct: 522 PDPHGNTCCMLPGA------------EFLSSKFWRKTHGRDSI-TRFSRSGG 560
>Glyma05g01680.2
Length = 611
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 19/112 (16%)
Query: 43 IQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGR--- 99
I+ QL Q+E QQ L+++LQ FMG S + M +LE RV GLE ++++S DL+ISSGR
Sbjct: 462 IRDQLHQIENQQSSLLDLLQKFMGSSQNGMRSLETRVHGLELALDEISYDLAISSGRMTK 521
Query: 100 ---RGNNFTGFEGSSSRPSSKYNGFNDYSSAKYGRGGDGRIQFGERFAQSDG 148
GN G+ ++ S+K+ R GR RF++S G
Sbjct: 522 PDPHGNTCCMLPGA------------EFLSSKFWRKTHGRDSI-TRFSRSGG 560
>Glyma05g01680.1
Length = 611
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 19/112 (16%)
Query: 43 IQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGR--- 99
I+ QL Q+E QQ L+++LQ FMG S + M +LE RV GLE ++++S DL+ISSGR
Sbjct: 462 IRDQLHQIENQQSSLLDLLQKFMGSSQNGMRSLETRVHGLELALDEISYDLAISSGRMTK 521
Query: 100 ---RGNNFTGFEGSSSRPSSKYNGFNDYSSAKYGRGGDGRIQFGERFAQSDG 148
GN G+ ++ S+K+ R GR RF++S G
Sbjct: 522 PDPHGNTCCMLPGA------------EFLSSKFWRKTHGRDSI-TRFSRSGG 560
>Glyma17g10200.1
Length = 533
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 18/100 (18%)
Query: 43 IQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGR--- 99
I+ QL Q+E+QQ L+++LQ FMG S + M +LE RV GLE ++++S DL+ISSGR
Sbjct: 443 IRDQLHQIEKQQSSLLDLLQKFMGSSQNGMRSLETRVHGLELALDEISYDLAISSGRMTK 502
Query: 100 ---RGNNFTGFEGSSSRPSSKYNGFNDYSSAKYGRGGDGR 136
+GN G+ ++ S+K+ R GR
Sbjct: 503 SDAQGNACCMLPGA------------EFLSSKFRRKTHGR 530
>Glyma01g04500.1
Length = 639
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Query: 40 WVAIQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGR 99
+ I+ QL+Q+E QQ +L+++LQ F+G S M +LE+RV GLE ++++S DL++S GR
Sbjct: 454 FALIREQLLQIENQQSNLLDLLQRFIGSSQSGMNSLESRVHGLEMALDEISHDLAVSGGR 513
Query: 100 RGNNFTGFEGSSSRPSSKYNGFNDYSSAKYGRGGDGR 136
N + P + D+ S+K+ + +GR
Sbjct: 514 VSNIDATEDTCCKLPGT------DFLSSKFWKKTEGR 544
>Glyma02g03050.1
Length = 608
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
Query: 39 NWVAIQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSG 98
++ I+ QL+Q+E QQ +L+++LQ F+G S M +LE+RV GLE ++++S+DL++ G
Sbjct: 422 DFALIREQLLQIENQQSNLLDLLQRFIGSSQSGMNSLESRVHGLEIALDEISQDLAV-PG 480
Query: 99 RRGNNFTGFEGSSSRPSSKYNGFNDYSSAKYGRGGDGR 136
R +N E + K G D+ S+K+ + +GR
Sbjct: 481 ARVSNIDATEDT----CCKLPG-TDFLSSKFWKKTEGR 513