Miyakogusa Predicted Gene

Lj0g3v0244289.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0244289.1 Non Chatacterized Hit- tr|I3SMC1|I3SMC1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,90.32,0.00000007,
,CUFF.15972.1
         (66 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g29400.1                                                        54   4e-08

>Glyma13g29400.1 
          Length = 204

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/31 (77%), Positives = 29/31 (93%)

Query: 12 SALNEATPGSVKSVFKAWDDRLNSSGDHLET 42
          +ALNEA PGSVKSVFKAW++RL+SSG HLE+
Sbjct: 30 TALNEANPGSVKSVFKAWEERLDSSGVHLES 60