Miyakogusa Predicted Gene

Lj0g3v0244099.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0244099.1 Non Chatacterized Hit- tr|B8ACT4|B8ACT4_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,66.67,0.058,PROTEIN RER1,Retrieval of early ER protein Rer1;
seg,NULL; Rer1,Retrieval of early ER protein Rer1,CUFF.16071.1
         (194 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g01400.1                                                       257   6e-69
Glyma04g01360.1                                                       256   1e-68
Glyma06g01410.2                                                       256   1e-68
Glyma06g01410.1                                                       256   1e-68
Glyma04g01370.2                                                       252   2e-67
Glyma04g01370.1                                                       252   2e-67
Glyma01g39640.1                                                       218   2e-57
Glyma17g18430.1                                                       204   4e-53
Glyma05g20940.1                                                       203   1e-52
Glyma11g05620.1                                                       178   4e-45
Glyma17g18430.2                                                       104   6e-23

>Glyma06g01400.1 
          Length = 194

 Score =  257 bits (656), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 127/160 (79%), Positives = 135/160 (84%)

Query: 15  VNQWWLEFSKMFQYYLDKSTPHTTYRWIGTVVIASIYVLRVFYVQGFYIVSXXXXXXXXX 74
           V Q+  +FSK+FQYYLDKSTPH+TYRWIGT VIASIYVLRV YVQGFYIVS         
Sbjct: 15  VKQYLHDFSKLFQYYLDKSTPHSTYRWIGTFVIASIYVLRVVYVQGFYIVSYGLGIYLLN 74

Query: 75  XXXXXXSPLVDPEVEHSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFS 134
                 SPLVDPE++ SD PLLPTKGSDEFKPFIRRLPEFKFWYSFTKA CIAFVMTFFS
Sbjct: 75  LLIGFLSPLVDPELDPSDSPLLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFS 134

Query: 135 VFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPLNL 174
           +FDVPVFWPILLCYW VLFVLTMRRQ+AHMIKYKYIP NL
Sbjct: 135 LFDVPVFWPILLCYWFVLFVLTMRRQVAHMIKYKYIPFNL 174


>Glyma04g01360.1 
          Length = 196

 Score =  256 bits (653), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 126/160 (78%), Positives = 135/160 (84%)

Query: 15  VNQWWLEFSKMFQYYLDKSTPHTTYRWIGTVVIASIYVLRVFYVQGFYIVSXXXXXXXXX 74
           V Q+  +FSK+FQYYLDKSTPH+TYRWIGT VIASIYVLRV YVQGFYIVS         
Sbjct: 17  VKQYLHDFSKLFQYYLDKSTPHSTYRWIGTFVIASIYVLRVVYVQGFYIVSYGLGIYLLN 76

Query: 75  XXXXXXSPLVDPEVEHSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFS 134
                 SPLVDPE++ SD PLLPTKGSDEFKPFIRRLPEFKFWYSFTKA CIAFVMTFFS
Sbjct: 77  LLIGFLSPLVDPELDPSDSPLLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFS 136

Query: 135 VFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPLNL 174
           +FDVPVFWPILLCYW VLFVLTMRRQ+AHM+KYKYIP NL
Sbjct: 137 LFDVPVFWPILLCYWFVLFVLTMRRQVAHMMKYKYIPFNL 176


>Glyma06g01410.2 
          Length = 198

 Score =  256 bits (653), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 124/161 (77%), Positives = 135/161 (83%)

Query: 14  PVNQWWLEFSKMFQYYLDKSTPHTTYRWIGTVVIASIYVLRVFYVQGFYIVSXXXXXXXX 73
           PV Q+  EFSK+FQYYLDKSTPH  YRWIGT VIASIYVLRV Y+QGFYIVS        
Sbjct: 18  PVKQYLQEFSKLFQYYLDKSTPHALYRWIGTFVIASIYVLRVVYLQGFYIVSYGLGIYLL 77

Query: 74  XXXXXXXSPLVDPEVEHSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFF 133
                  SPLVDPE++ S+ P+LPTKGSDEFKPFIRRLPEFKFWYSFTKA CIAFVMTFF
Sbjct: 78  NLLIGFLSPLVDPELDPSNAPMLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFF 137

Query: 134 SVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPLNL 174
           S+FDVPVFWPILLCYW+VLFVLTMRRQ+AHM+KYKYIP NL
Sbjct: 138 SMFDVPVFWPILLCYWVVLFVLTMRRQVAHMMKYKYIPFNL 178


>Glyma06g01410.1 
          Length = 198

 Score =  256 bits (653), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 124/161 (77%), Positives = 135/161 (83%)

Query: 14  PVNQWWLEFSKMFQYYLDKSTPHTTYRWIGTVVIASIYVLRVFYVQGFYIVSXXXXXXXX 73
           PV Q+  EFSK+FQYYLDKSTPH  YRWIGT VIASIYVLRV Y+QGFYIVS        
Sbjct: 18  PVKQYLQEFSKLFQYYLDKSTPHALYRWIGTFVIASIYVLRVVYLQGFYIVSYGLGIYLL 77

Query: 74  XXXXXXXSPLVDPEVEHSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFF 133
                  SPLVDPE++ S+ P+LPTKGSDEFKPFIRRLPEFKFWYSFTKA CIAFVMTFF
Sbjct: 78  NLLIGFLSPLVDPELDPSNAPMLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFF 137

Query: 134 SVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPLNL 174
           S+FDVPVFWPILLCYW+VLFVLTMRRQ+AHM+KYKYIP NL
Sbjct: 138 SMFDVPVFWPILLCYWVVLFVLTMRRQVAHMMKYKYIPFNL 178


>Glyma04g01370.2 
          Length = 194

 Score =  252 bits (643), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 123/160 (76%), Positives = 134/160 (83%)

Query: 15  VNQWWLEFSKMFQYYLDKSTPHTTYRWIGTVVIASIYVLRVFYVQGFYIVSXXXXXXXXX 74
           + Q+  EFSK+FQYYLDKSTPH  YRWIGT VIASIYVLRV YVQGFYIVS         
Sbjct: 15  LKQYLQEFSKLFQYYLDKSTPHPPYRWIGTFVIASIYVLRVVYVQGFYIVSYGLGIYLLN 74

Query: 75  XXXXXXSPLVDPEVEHSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFS 134
                 SPLVDPE++ S+ P+LPTKGSDEFKPFIRRLPEFKFWYSFTKA CIAFVMTFFS
Sbjct: 75  LLIGFLSPLVDPELDPSNAPMLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFS 134

Query: 135 VFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPLNL 174
           +FDVPVFWPILLCYW+VLFVLTMRRQ+AHM+KYKYIP NL
Sbjct: 135 MFDVPVFWPILLCYWVVLFVLTMRRQVAHMMKYKYIPFNL 174


>Glyma04g01370.1 
          Length = 194

 Score =  252 bits (643), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 123/160 (76%), Positives = 134/160 (83%)

Query: 15  VNQWWLEFSKMFQYYLDKSTPHTTYRWIGTVVIASIYVLRVFYVQGFYIVSXXXXXXXXX 74
           + Q+  EFSK+FQYYLDKSTPH  YRWIGT VIASIYVLRV YVQGFYIVS         
Sbjct: 15  LKQYLQEFSKLFQYYLDKSTPHPPYRWIGTFVIASIYVLRVVYVQGFYIVSYGLGIYLLN 74

Query: 75  XXXXXXSPLVDPEVEHSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFS 134
                 SPLVDPE++ S+ P+LPTKGSDEFKPFIRRLPEFKFWYSFTKA CIAFVMTFFS
Sbjct: 75  LLIGFLSPLVDPELDPSNAPMLPTKGSDEFKPFIRRLPEFKFWYSFTKALCIAFVMTFFS 134

Query: 135 VFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPLNL 174
           +FDVPVFWPILLCYW+VLFVLTMRRQ+AHM+KYKYIP NL
Sbjct: 135 MFDVPVFWPILLCYWVVLFVLTMRRQVAHMMKYKYIPFNL 174


>Glyma01g39640.1 
          Length = 191

 Score =  218 bits (556), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 106/173 (61%), Positives = 127/173 (73%), Gaps = 2/173 (1%)

Query: 1   MEGTGGXXXXXXXPVNQWWLEFSKMFQYYLDKSTPHTTYRWIGTVVIASIYVLRVFYVQG 60
           M+   G        +++W    S+ +Q+ LDK+TPH   RWIG +V+A++YVLRV+ VQG
Sbjct: 1   MDVGAGDDHSPEAVISRWKFAVSQQYQHMLDKTTPHVLRRWIGCLVVAAVYVLRVYLVQG 60

Query: 61  FYIVSXXXXXXXXXXXXXXXSPLVDPEVEHSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           FYIVS               SP VDPE+  SDGP LPT+GSDEF+PF+RRLPEFKFWYS 
Sbjct: 61  FYIVSYALGIYILNLLIGFLSPQVDPEI--SDGPTLPTRGSDEFRPFVRRLPEFKFWYSI 118

Query: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPLN 173
           TKAFCIAFVMTFFS FDVPVFWPILL YW+VLF LTMRRQI+HMIKYKY+P +
Sbjct: 119 TKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFS 171


>Glyma17g18430.1 
          Length = 197

 Score =  204 bits (520), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 99/172 (57%), Positives = 122/172 (70%), Gaps = 2/172 (1%)

Query: 4   TGGXXXXXXXPVNQWWLEFSKMFQYYLDKSTPHTTYRWIGTVVIASIYVLRVFYVQGFYI 63
           TGG        +++W     + +Q+ LDKSTPH   RW+G   +A +Y+LRV++V+GFY+
Sbjct: 3   TGGGGASPTAAMSRWKFAAWRQYQHLLDKSTPHVGRRWLGFAAVALLYLLRVYFVEGFYV 62

Query: 64  VSXXXXXXXXXXXXXXXSPLVDPEVE--HSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFT 121
           VS               SP VDPE    ++D P+LP   SDEF+PF+RRLPEFKFWYS T
Sbjct: 63  VSYGLGIYILNLLIGFLSPQVDPETAILNADDPILPIAASDEFRPFVRRLPEFKFWYSIT 122

Query: 122 KAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPLN 173
           KAFCIAFVMTFFSVFDVPVFWPILL YW+VLF LTMRRQI+HMIKYKY+P +
Sbjct: 123 KAFCIAFVMTFFSVFDVPVFWPILLFYWVVLFSLTMRRQISHMIKYKYLPFS 174


>Glyma05g20940.1 
          Length = 198

 Score =  203 bits (516), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 100/173 (57%), Positives = 119/173 (68%), Gaps = 2/173 (1%)

Query: 3   GTGGXXXXXXXPVNQWWLEFSKMFQYYLDKSTPHTTYRWIGTVVIASIYVLRVFYVQGFY 62
           G GG        +++W     + FQ+ LDKSTPH   RW+G   +A +Y LRV+ VQGFY
Sbjct: 5   GGGGGASSPTATMSRWKFAAWRQFQHLLDKSTPHVGRRWLGFAAVALLYALRVYLVQGFY 64

Query: 63  IVSXXXXXXXXXXXXXXXSPLVDPE--VEHSDGPLLPTKGSDEFKPFIRRLPEFKFWYSF 120
           +VS               SP VDPE  +  +D P LP+  SDEF+PF+RRLPEFKFWYS 
Sbjct: 65  VVSYGLGIYILNLLIGFLSPQVDPETVILDADVPTLPSTASDEFRPFVRRLPEFKFWYSI 124

Query: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPLN 173
           TKAFCIAFVMTFFS FDVPVFWPILL YW+VLF LTMRRQI+HMIKYKY+P +
Sbjct: 125 TKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFSLTMRRQISHMIKYKYLPFS 177


>Glyma11g05620.1 
          Length = 191

 Score =  178 bits (451), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 91/159 (57%), Positives = 108/159 (67%), Gaps = 2/159 (1%)

Query: 15  VNQWWLEFSKMFQYYLDKSTPHTTYRWIGTVVIASIYVLRVFYVQGFYIVSXXXXXXXXX 74
           +++W    S+ +Q+ LDK+TPH   RWIG   +   YVLRV+ VQGFYIVS         
Sbjct: 15  ISRWKFAVSRQYQHMLDKTTPHVLRRWIGAWWLPPCYVLRVYLVQGFYIVSYALRHLHLT 74

Query: 75  XXXXXXSPLVDPEVEHSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFS 134
                    VDPE+     P  P     +F+PF+RRLPEFKFWYS TKAFCIAFVMTFFS
Sbjct: 75  LIGLPPPLQVDPEIIGRPHP--PHPRIRQFRPFVRRLPEFKFWYSITKAFCIAFVMTFFS 132

Query: 135 VFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPLN 173
            FDVPVFWPILL YW+VLF LTMRRQI+HMIKYKY+P +
Sbjct: 133 AFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFS 171


>Glyma17g18430.2 
          Length = 139

 Score =  104 bits (260), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 70/117 (59%), Gaps = 2/117 (1%)

Query: 4   TGGXXXXXXXPVNQWWLEFSKMFQYYLDKSTPHTTYRWIGTVVIASIYVLRVFYVQGFYI 63
           TGG        +++W     + +Q+ LDKSTPH   RW+G   +A +Y+LRV++V+GFY+
Sbjct: 3   TGGGGASPTAAMSRWKFAAWRQYQHLLDKSTPHVGRRWLGFAAVALLYLLRVYFVEGFYV 62

Query: 64  VSXXXXXXXXXXXXXXXSPLVDPEVE--HSDGPLLPTKGSDEFKPFIRRLPEFKFWY 118
           VS               SP VDPE    ++D P+LP   SDEF+PF+RRLPEFKF +
Sbjct: 63  VSYGLGIYILNLLIGFLSPQVDPETAILNADDPILPIAASDEFRPFVRRLPEFKFCF 119