Miyakogusa Predicted Gene

Lj0g3v0242709.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0242709.1 gene.g18958.t1.1
         (77 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g03470.1                                                       140   2e-34
Glyma05g36170.1                                                       137   3e-33

>Glyma08g03470.1 
          Length = 992

 Score =  140 bits (354), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/95 (74%), Positives = 74/95 (77%), Gaps = 20/95 (21%)

Query: 1   MQVLRFKHGQ--------------------VDLALDEMLRLQEEGPSEQDVSTVLEIEQR 40
           MQVLRFK GQ                    VD+ALDEMLRLQEEGPSEQDVST+LEIEQR
Sbjct: 802 MQVLRFKLGQIYSVGVSVFLGGNKPSRIGDVDIALDEMLRLQEEGPSEQDVSTILEIEQR 861

Query: 41  AHENGLQENYYWLDRILHSYQSRVYSGDVGTSFEV 75
           AHENGLQENYYWLDRILHSYQSRVYSGDVGTSFE+
Sbjct: 862 AHENGLQENYYWLDRILHSYQSRVYSGDVGTSFEI 896


>Glyma05g36170.1 
          Length = 949

 Score =  137 bits (344), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 70/104 (67%), Positives = 74/104 (71%), Gaps = 29/104 (27%)

Query: 1   MQVLRFKHGQVD-----------------------------LALDEMLRLQEEGPSEQDV 31
           MQVLRFKHGQ+                              +ALDEMLRLQEEGPSEQDV
Sbjct: 764 MQVLRFKHGQIYSVGVSVFLGGNKPSRIGDIRGDISINFSYIALDEMLRLQEEGPSEQDV 823

Query: 32  STVLEIEQRAHENGLQENYYWLDRILHSYQSRVYSGDVGTSFEV 75
           ST+LEIEQRAHENGLQENYYWLDRILHSYQSRVYSGDVGTSFE+
Sbjct: 824 STILEIEQRAHENGLQENYYWLDRILHSYQSRVYSGDVGTSFEI 867