Miyakogusa Predicted Gene
- Lj0g3v0242399.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0242399.1 tr|E9HLF4|E9HLF4_DAPPU Ubiquitin
carboxyl-terminal hydrolase OS=Daphnia pulex GN=DAPPUDRAFT_261673
P,30.88,2e-18,seg,NULL; Cysteine proteinases,NULL; DUSP-like,NULL;
UCH_2_3,Peptidase C19, ubiquitin carboxyl-termi,CUFF.15851.1
(314 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g17070.1 471 e-133
Glyma04g07850.1 457 e-129
Glyma04g07850.3 457 e-129
Glyma04g07850.2 457 e-129
Glyma17g29610.1 450 e-127
Glyma06g07920.2 449 e-126
Glyma06g07920.1 448 e-126
Glyma14g13270.1 75 9e-14
Glyma02g46080.1 58 1e-08
Glyma07g01480.1 54 2e-07
>Glyma14g17070.1
Length = 1038
Score = 471 bits (1211), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/314 (73%), Positives = 254/314 (80%), Gaps = 32/314 (10%)
Query: 1 MHHRLSEPPQCELIYDLSAVLIHKGTAANSGHYIAHIKDENTGQWWEFDDEHVTNLGRHP 60
M HRLSEP Q ELIYDLSAVLIHKGTA NSGHYIAHIKD NTGQWWEFDDE+VTNLG HP
Sbjct: 317 MRHRLSEPSQFELIYDLSAVLIHKGTAVNSGHYIAHIKDVNTGQWWEFDDENVTNLGCHP 376
Query: 61 FGEEASCPTSKSVKTDVDNSNISEAMVTDNNGNGLSTTHXXXXXXXXXXXXDAYMLMYHL 120
FGE S TSKSVKTD +S+ DAYMLMYHL
Sbjct: 377 FGEGTS-STSKSVKTDTFSSS------------------------------DAYMLMYHL 405
Query: 121 KRTKNVDEKGGMVCGANHRESDDGAVTAHENGCLPSHFSEEIQNFNASYVDACEQYSHRK 180
K +KNV EKGG+V GAN E + AVTA ++ CLPSHF +EIQNFNASY+D+CEQY HRK
Sbjct: 406 KHSKNVGEKGGIVYGAN-LEVEGNAVTAQDSACLPSHFCKEIQNFNASYLDSCEQYKHRK 464
Query: 181 ELEVSRINERKQEVRSVLAEAPVQPLEQPYFWISSDWLRQWAENIIPTAIDNTSLQCSHG 240
ELE+S INER+QEVRS+LAEAP QPLEQPYFWI SDWLRQWA+NIIP A+DNTS+QCSHG
Sbjct: 465 ELELSHINERRQEVRSILAEAPTQPLEQPYFWICSDWLRQWADNIIPIALDNTSIQCSHG 524
Query: 241 KVPVSKVASMKRLSSKAWDQLLSKYGGGPKLAHDDCCWDCLIDGAQNVVSADTYRDQRES 300
KVPVSKV SMKRLSSKAWD+LLSKYGGGP L+H+DCCWDCLIDGAQNVVSADTYRDQRES
Sbjct: 525 KVPVSKVTSMKRLSSKAWDKLLSKYGGGPTLSHEDCCWDCLIDGAQNVVSADTYRDQRES 584
Query: 301 LKQLAREILDGNCE 314
LK+LAR+ILDGNCE
Sbjct: 585 LKRLARDILDGNCE 598
>Glyma04g07850.1
Length = 1085
Score = 457 bits (1176), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/314 (71%), Positives = 261/314 (83%), Gaps = 2/314 (0%)
Query: 1 MHHRLSEPPQCELIYDLSAVLIHKGTAANSGHYIAHIKDENTGQWWEFDDEHVTNLGRHP 60
M HR+SE Q L+YDLSAVLIHKGT ANSGHYIAHIKD NTGQWWEFDDEHVTNLG HP
Sbjct: 330 MRHRMSELSQFNLVYDLSAVLIHKGTGANSGHYIAHIKDVNTGQWWEFDDEHVTNLGFHP 389
Query: 61 FGEEASCPTSKSVKTDVDNSNISEAMVTDNNGNGLSTTHXXXXXXXXXXXXDAYMLMYHL 120
FGEE+S T+KS+KTD +S+ SEAMV D+NGNGL+ TH DAYMLMYHL
Sbjct: 390 FGEESSSSTTKSIKTDAIHSDNSEAMVADSNGNGLNATHSLSSQVETFLSSDAYMLMYHL 449
Query: 121 KRTKNVDEKGGMVCGANHRESDDGAVTAHENGC-LPSHFSEEIQNFNASYVDACEQYSHR 179
K+TKNV E GG++CGANH+ES +G V A +NG LPSH +EIQ+FNASY DAC +Y++R
Sbjct: 450 KQTKNVGESGGVICGANHKES-EGVVVAVQNGVPLPSHIYDEIQSFNASYDDACRRYNNR 508
Query: 180 KELEVSRINERKQEVRSVLAEAPVQPLEQPYFWISSDWLRQWAENIIPTAIDNTSLQCSH 239
KELE+S I+ER+QEVRSVLAEAPVQPLEQP++WISS+WLRQWA+NIIP +DNT +QCSH
Sbjct: 509 KELELSLISERRQEVRSVLAEAPVQPLEQPFYWISSEWLRQWADNIIPIPLDNTPVQCSH 568
Query: 240 GKVPVSKVASMKRLSSKAWDQLLSKYGGGPKLAHDDCCWDCLIDGAQNVVSADTYRDQRE 299
GKVPVSKV SMKRLS+KAWD L SKYGGGP L+HD+ C DCLI GA VVSADTYRD+RE
Sbjct: 569 GKVPVSKVTSMKRLSAKAWDTLFSKYGGGPALSHDNHCRDCLIHGAMTVVSADTYRDRRE 628
Query: 300 SLKQLAREILDGNC 313
S+K LAR+ILDGNC
Sbjct: 629 SMKSLARDILDGNC 642
>Glyma04g07850.3
Length = 1083
Score = 457 bits (1176), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/314 (71%), Positives = 261/314 (83%), Gaps = 2/314 (0%)
Query: 1 MHHRLSEPPQCELIYDLSAVLIHKGTAANSGHYIAHIKDENTGQWWEFDDEHVTNLGRHP 60
M HR+SE Q L+YDLSAVLIHKGT ANSGHYIAHIKD NTGQWWEFDDEHVTNLG HP
Sbjct: 330 MRHRMSELSQFNLVYDLSAVLIHKGTGANSGHYIAHIKDVNTGQWWEFDDEHVTNLGFHP 389
Query: 61 FGEEASCPTSKSVKTDVDNSNISEAMVTDNNGNGLSTTHXXXXXXXXXXXXDAYMLMYHL 120
FGEE+S T+KS+KTD +S+ SEAMV D+NGNGL+ TH DAYMLMYHL
Sbjct: 390 FGEESSSSTTKSIKTDAIHSDNSEAMVADSNGNGLNATHSLSSQVETFLSSDAYMLMYHL 449
Query: 121 KRTKNVDEKGGMVCGANHRESDDGAVTAHENGC-LPSHFSEEIQNFNASYVDACEQYSHR 179
K+TKNV E GG++CGANH+ES +G V A +NG LPSH +EIQ+FNASY DAC +Y++R
Sbjct: 450 KQTKNVGESGGVICGANHKES-EGVVVAVQNGVPLPSHIYDEIQSFNASYDDACRRYNNR 508
Query: 180 KELEVSRINERKQEVRSVLAEAPVQPLEQPYFWISSDWLRQWAENIIPTAIDNTSLQCSH 239
KELE+S I+ER+QEVRSVLAEAPVQPLEQP++WISS+WLRQWA+NIIP +DNT +QCSH
Sbjct: 509 KELELSLISERRQEVRSVLAEAPVQPLEQPFYWISSEWLRQWADNIIPIPLDNTPVQCSH 568
Query: 240 GKVPVSKVASMKRLSSKAWDQLLSKYGGGPKLAHDDCCWDCLIDGAQNVVSADTYRDQRE 299
GKVPVSKV SMKRLS+KAWD L SKYGGGP L+HD+ C DCLI GA VVSADTYRD+RE
Sbjct: 569 GKVPVSKVTSMKRLSAKAWDTLFSKYGGGPALSHDNHCRDCLIHGAMTVVSADTYRDRRE 628
Query: 300 SLKQLAREILDGNC 313
S+K LAR+ILDGNC
Sbjct: 629 SMKSLARDILDGNC 642
>Glyma04g07850.2
Length = 1083
Score = 457 bits (1176), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/314 (71%), Positives = 261/314 (83%), Gaps = 2/314 (0%)
Query: 1 MHHRLSEPPQCELIYDLSAVLIHKGTAANSGHYIAHIKDENTGQWWEFDDEHVTNLGRHP 60
M HR+SE Q L+YDLSAVLIHKGT ANSGHYIAHIKD NTGQWWEFDDEHVTNLG HP
Sbjct: 330 MRHRMSELSQFNLVYDLSAVLIHKGTGANSGHYIAHIKDVNTGQWWEFDDEHVTNLGFHP 389
Query: 61 FGEEASCPTSKSVKTDVDNSNISEAMVTDNNGNGLSTTHXXXXXXXXXXXXDAYMLMYHL 120
FGEE+S T+KS+KTD +S+ SEAMV D+NGNGL+ TH DAYMLMYHL
Sbjct: 390 FGEESSSSTTKSIKTDAIHSDNSEAMVADSNGNGLNATHSLSSQVETFLSSDAYMLMYHL 449
Query: 121 KRTKNVDEKGGMVCGANHRESDDGAVTAHENGC-LPSHFSEEIQNFNASYVDACEQYSHR 179
K+TKNV E GG++CGANH+ES +G V A +NG LPSH +EIQ+FNASY DAC +Y++R
Sbjct: 450 KQTKNVGESGGVICGANHKES-EGVVVAVQNGVPLPSHIYDEIQSFNASYDDACRRYNNR 508
Query: 180 KELEVSRINERKQEVRSVLAEAPVQPLEQPYFWISSDWLRQWAENIIPTAIDNTSLQCSH 239
KELE+S I+ER+QEVRSVLAEAPVQPLEQP++WISS+WLRQWA+NIIP +DNT +QCSH
Sbjct: 509 KELELSLISERRQEVRSVLAEAPVQPLEQPFYWISSEWLRQWADNIIPIPLDNTPVQCSH 568
Query: 240 GKVPVSKVASMKRLSSKAWDQLLSKYGGGPKLAHDDCCWDCLIDGAQNVVSADTYRDQRE 299
GKVPVSKV SMKRLS+KAWD L SKYGGGP L+HD+ C DCLI GA VVSADTYRD+RE
Sbjct: 569 GKVPVSKVTSMKRLSAKAWDTLFSKYGGGPALSHDNHCRDCLIHGAMTVVSADTYRDRRE 628
Query: 300 SLKQLAREILDGNC 313
S+K LAR+ILDGNC
Sbjct: 629 SMKSLARDILDGNC 642
>Glyma17g29610.1
Length = 1053
Score = 450 bits (1157), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/314 (69%), Positives = 244/314 (77%), Gaps = 31/314 (9%)
Query: 1 MHHRLSEPPQCELIYDLSAVLIHKGTAANSGHYIAHIKDENTGQWWEFDDEHVTNLGRHP 60
MHHRLSEP Q EL+YDLSAVLIHKGTA NSGHYIAHIKD NTGQWWEFDDE+VTNLG HP
Sbjct: 331 MHHRLSEPSQFELMYDLSAVLIHKGTAVNSGHYIAHIKDVNTGQWWEFDDENVTNLGCHP 390
Query: 61 FGEEASCPTSKSVKTDVDNSNISEAMVTDNNGNGLSTTHXXXXXXXXXXXXDAYMLMYHL 120
GE +S + +S DAYMLMYHL
Sbjct: 391 VGEGSSSTSKSVKTDTFSSS-------------------------------DAYMLMYHL 419
Query: 121 KRTKNVDEKGGMVCGANHRESDDGAVTAHENGCLPSHFSEEIQNFNASYVDACEQYSHRK 180
K +KNV EKGG+V GAN E AVTA ++ CLPSH EEIQ+FNASY+D+CEQY HRK
Sbjct: 420 KHSKNVGEKGGIVYGANLEEVAGNAVTAQDSACLPSHLCEEIQSFNASYLDSCEQYKHRK 479
Query: 181 ELEVSRINERKQEVRSVLAEAPVQPLEQPYFWISSDWLRQWAENIIPTAIDNTSLQCSHG 240
LE+SRINER+QEVRS+LAEAP Q L+QPYFWI SDWLRQWA+N+IP A+DNTS+QCSHG
Sbjct: 480 VLELSRINERRQEVRSILAEAPTQSLQQPYFWICSDWLRQWADNLIPIALDNTSIQCSHG 539
Query: 241 KVPVSKVASMKRLSSKAWDQLLSKYGGGPKLAHDDCCWDCLIDGAQNVVSADTYRDQRES 300
KVPVSKV SMKRLSSKAWD+LLSKYGGGP L+H+DCCWDCLIDGAQNVVSADTYRDQRES
Sbjct: 540 KVPVSKVTSMKRLSSKAWDKLLSKYGGGPTLSHEDCCWDCLIDGAQNVVSADTYRDQRES 599
Query: 301 LKQLAREILDGNCE 314
LK+LAR+ILDGNCE
Sbjct: 600 LKRLARDILDGNCE 613
>Glyma06g07920.2
Length = 1085
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/314 (70%), Positives = 257/314 (81%), Gaps = 2/314 (0%)
Query: 1 MHHRLSEPPQCELIYDLSAVLIHKGTAANSGHYIAHIKDENTGQWWEFDDEHVTNLGRHP 60
M HR+SE Q L+YDLSAVLIHKGT ANSGHYIAHIKD NTGQWWEFDDEHVTNLG HP
Sbjct: 330 MRHRMSELSQFNLVYDLSAVLIHKGTGANSGHYIAHIKDVNTGQWWEFDDEHVTNLGFHP 389
Query: 61 FGEEASCPTSKSVKTDVDNSNISEAMVTDNNGNGLSTTHXXXXXXXXXXXXDAYMLMYHL 120
FGEE+S T+KS+KTD + + SEAMV D+NGNGLS TH DAYMLMYHL
Sbjct: 390 FGEESSSSTTKSIKTDAIHFDNSEAMVADSNGNGLSATHSQSSKVETFLSSDAYMLMYHL 449
Query: 121 KRTKNVDEKGGMVCGANHRESDDGAVTAHENGC-LPSHFSEEIQNFNASYVDACEQYSHR 179
K TK+V + GG++CG NH+E +G V A +NG LPSH +EIQ+FN SY DAC+QY++R
Sbjct: 450 KHTKSVGKSGGVICGVNHKER-EGVVVAVQNGVPLPSHIYDEIQSFNTSYDDACQQYNNR 508
Query: 180 KELEVSRINERKQEVRSVLAEAPVQPLEQPYFWISSDWLRQWAENIIPTAIDNTSLQCSH 239
KEL++SRI+ER+QEVRSVLAEAPVQ LEQP++WISS+WLRQWA+NIIP +DNTS+QCSH
Sbjct: 509 KELQLSRISERRQEVRSVLAEAPVQSLEQPFYWISSEWLRQWADNIIPIPLDNTSVQCSH 568
Query: 240 GKVPVSKVASMKRLSSKAWDQLLSKYGGGPKLAHDDCCWDCLIDGAQNVVSADTYRDQRE 299
GKVPVS V SMKRLS+KAWD L SKYGGGP L+HD+ C DCLI GA VVSADTYRD+RE
Sbjct: 569 GKVPVSNVTSMKRLSAKAWDMLFSKYGGGPALSHDNHCRDCLIHGAMTVVSADTYRDRRE 628
Query: 300 SLKQLAREILDGNC 313
S+K LAR+ILDGNC
Sbjct: 629 SMKSLARDILDGNC 642
>Glyma06g07920.1
Length = 1117
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/314 (70%), Positives = 257/314 (81%), Gaps = 2/314 (0%)
Query: 1 MHHRLSEPPQCELIYDLSAVLIHKGTAANSGHYIAHIKDENTGQWWEFDDEHVTNLGRHP 60
M HR+SE Q L+YDLSAVLIHKGT ANSGHYIAHIKD NTGQWWEFDDEHVTNLG HP
Sbjct: 330 MRHRMSELSQFNLVYDLSAVLIHKGTGANSGHYIAHIKDVNTGQWWEFDDEHVTNLGFHP 389
Query: 61 FGEEASCPTSKSVKTDVDNSNISEAMVTDNNGNGLSTTHXXXXXXXXXXXXDAYMLMYHL 120
FGEE+S T+KS+KTD + + SEAMV D+NGNGLS TH DAYMLMYHL
Sbjct: 390 FGEESSSSTTKSIKTDAIHFDNSEAMVADSNGNGLSATHSQSSKVETFLSSDAYMLMYHL 449
Query: 121 KRTKNVDEKGGMVCGANHRESDDGAVTAHENGC-LPSHFSEEIQNFNASYVDACEQYSHR 179
K TK+V + GG++CG NH+E +G V A +NG LPSH +EIQ+FN SY DAC+QY++R
Sbjct: 450 KHTKSVGKSGGVICGVNHKER-EGVVVAVQNGVPLPSHIYDEIQSFNTSYDDACQQYNNR 508
Query: 180 KELEVSRINERKQEVRSVLAEAPVQPLEQPYFWISSDWLRQWAENIIPTAIDNTSLQCSH 239
KEL++SRI+ER+QEVRSVLAEAPVQ LEQP++WISS+WLRQWA+NIIP +DNTS+QCSH
Sbjct: 509 KELQLSRISERRQEVRSVLAEAPVQSLEQPFYWISSEWLRQWADNIIPIPLDNTSVQCSH 568
Query: 240 GKVPVSKVASMKRLSSKAWDQLLSKYGGGPKLAHDDCCWDCLIDGAQNVVSADTYRDQRE 299
GKVPVS V SMKRLS+KAWD L SKYGGGP L+HD+ C DCLI GA VVSADTYRD+RE
Sbjct: 569 GKVPVSNVTSMKRLSAKAWDMLFSKYGGGPALSHDNHCRDCLIHGAMTVVSADTYRDRRE 628
Query: 300 SLKQLAREILDGNC 313
S+K LAR+ILDGNC
Sbjct: 629 SMKSLARDILDGNC 642
>Glyma14g13270.1
Length = 379
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 226 IPTAIDNTSLQCSHGKVPVSKVASMKRLSSKAWDQLLSKYGGGPKLAHDDCCWDCLIDGA 285
I + I T + S G P ++ + L YGGGP L+HD+ C DCLI GA
Sbjct: 25 IVSRILKTCIAYSSGVTPAILLSEL---------SLRRGYGGGPTLSHDNHCRDCLIHGA 75
Query: 286 QNVVSADTYRDQRESLKQLAREILDG 311
VVSADTYRD+RES+K LA +ILDG
Sbjct: 76 MTVVSADTYRDRRESMKSLAWDILDG 101
>Glyma02g46080.1
Length = 159
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 29/37 (78%)
Query: 6 SEPPQCELIYDLSAVLIHKGTAANSGHYIAHIKDENT 42
SE EL Y+LS VLIHKGTAANSGHYI HIKDE T
Sbjct: 4 SELFLFELTYNLSVVLIHKGTAANSGHYIPHIKDEKT 40
>Glyma07g01480.1
Length = 480
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Query: 14 IYDLSAVLIHKGTAANSGHYIAHIKDENTGQWWEFDDEH 52
IYDL AVL HKG +A+SGHY+ +K EN G+W EFDD++
Sbjct: 410 IYDLVAVLTHKGRSADSGHYVGWVKQEN-GKWIEFDDDN 447