Miyakogusa Predicted Gene

Lj0g3v0242069.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0242069.1 tr|A9RIG4|A9RIG4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_159272,31.87,0.22,
,NODE_48751_length_916_cov_23.459606.path2.1
         (175 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g10520.1                                                       182   2e-46
Glyma16g34710.1                                                       175   2e-44
Glyma20g16200.1                                                       172   1e-43
Glyma13g10520.2                                                       140   5e-34
Glyma16g34710.2                                                       130   5e-31

>Glyma13g10520.1 
          Length = 178

 Score =  182 bits (462), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 95/150 (63%), Positives = 104/150 (69%), Gaps = 3/150 (2%)

Query: 1   MRFIGALRNIVXXXXXXXXXXXXXQICTNPTTTAL---LESPCKLPQWLFPLRNHFHSLT 57
           M F GALRNIV             +I TN +         SPCK PQWL PL NHFHSLT
Sbjct: 1   MGFAGALRNIVRPLSVASSRALTPRISTNASMAPFCPAFPSPCKTPQWLHPLWNHFHSLT 60

Query: 58  DTXXXXXXXXXXXXXXXASLRPPGPYAWVQYTPGEPILPNKPNEGSVKRRNEKKRVRQHR 117
           DT               ASLRP GPYAWVQYTPG+PILPNKPNEGSVKRRNEKKR+RQ R
Sbjct: 61  DTRFPKRRPSEKPRRKRASLRPSGPYAWVQYTPGQPILPNKPNEGSVKRRNEKKRMRQRR 120

Query: 118 AFVLAERKKRKAQLQEANRKKSIKKVERKM 147
           AF+LAE+KKRKAQLQEANRKK+I++VERKM
Sbjct: 121 AFILAEKKKRKAQLQEANRKKNIQRVERKM 150


>Glyma16g34710.1 
          Length = 178

 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 94/150 (62%), Positives = 104/150 (69%), Gaps = 3/150 (2%)

Query: 1   MRFIGALRNIVXXXXXXXXXXXXXQICTNPTTTAL---LESPCKLPQWLFPLRNHFHSLT 57
           M   GALRNIV             +I TN +   +   L SPCK PQ L PL +HFHSLT
Sbjct: 1   MGSAGALRNIVRSLSVASSRALLPRISTNASMAPICFALPSPCKPPQRLLPLWSHFHSLT 60

Query: 58  DTXXXXXXXXXXXXXXXASLRPPGPYAWVQYTPGEPILPNKPNEGSVKRRNEKKRVRQHR 117
           DT               ASLRP GPYAWVQYTPG+PILPNKPNEGSVKRRNEKKR+RQ R
Sbjct: 61  DTRFPKRRPSERPRRKRASLRPSGPYAWVQYTPGQPILPNKPNEGSVKRRNEKKRMRQRR 120

Query: 118 AFVLAERKKRKAQLQEANRKKSIKKVERKM 147
           AF+LAERKKRKAQLQEANRKK+I++VERKM
Sbjct: 121 AFILAERKKRKAQLQEANRKKNIQRVERKM 150


>Glyma20g16200.1 
          Length = 178

 Score =  172 bits (437), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 92/150 (61%), Positives = 101/150 (67%), Gaps = 3/150 (2%)

Query: 1   MRFIGALRNIVXXXXXXXXXXXXXQICTNPTTTAL---LESPCKLPQWLFPLRNHFHSLT 57
           M F GALRNIV             +I  N +         SPCK PQWL PL N FHSLT
Sbjct: 1   MGFAGALRNIVRPLSVASSRALMPRISINASMAPFCPAFPSPCKPPQWLHPLWNQFHSLT 60

Query: 58  DTXXXXXXXXXXXXXXXASLRPPGPYAWVQYTPGEPILPNKPNEGSVKRRNEKKRVRQHR 117
           DT               ASLRP GPYAWVQYTP +PILPNKPNEGSVKRRNEKKR+RQ R
Sbjct: 61  DTRFPKRRPSEKPRRKRASLRPSGPYAWVQYTPCQPILPNKPNEGSVKRRNEKKRMRQRR 120

Query: 118 AFVLAERKKRKAQLQEANRKKSIKKVERKM 147
           AF+LAE+KKRKAQLQEANRKK+I++VERKM
Sbjct: 121 AFILAEKKKRKAQLQEANRKKNIQRVERKM 150


>Glyma13g10520.2 
          Length = 152

 Score =  140 bits (354), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 77/140 (55%), Positives = 84/140 (60%), Gaps = 8/140 (5%)

Query: 1   MRFIGALRNIVXXXXXXXXXXXXXQICTNPTTTAL---LESPCKLPQWLFPLRNHFHSLT 57
           M F GALRNIV             +I TN +         SPCK PQWL PL NHFHSLT
Sbjct: 1   MGFAGALRNIVRPLSVASSRALTPRISTNASMAPFCPAFPSPCKTPQWLHPLWNHFHSLT 60

Query: 58  DTXXXXXXXXXXXXXXXASLRPPGPYAWVQYTPGEPILPNKPNEGSVKRRNEKKRVRQHR 117
           DT               ASLRP GPYAWVQYTPG+PILPNKPNEGSVKRRNEKKR+RQ R
Sbjct: 61  DTRFPKRRPSEKPRRKRASLRPSGPYAWVQYTPGQPILPNKPNEGSVKRRNEKKRMRQRR 120

Query: 118 AFVLAER-----KKRKAQLQ 132
           AF+L        K+RK +L 
Sbjct: 121 AFILVRSPFTLLKRRKGRLS 140


>Glyma16g34710.2 
          Length = 167

 Score =  130 bits (328), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/125 (56%), Positives = 78/125 (62%), Gaps = 3/125 (2%)

Query: 1   MRFIGALRNIVXXXXXXXXXXXXXQICTNPTTTAL---LESPCKLPQWLFPLRNHFHSLT 57
           M   GALRNIV             +I TN +   +   L SPCK PQ L PL +HFHSLT
Sbjct: 1   MGSAGALRNIVRSLSVASSRALLPRISTNASMAPICFALPSPCKPPQRLLPLWSHFHSLT 60

Query: 58  DTXXXXXXXXXXXXXXXASLRPPGPYAWVQYTPGEPILPNKPNEGSVKRRNEKKRVRQHR 117
           DT               ASLRP GPYAWVQYTPG+PILPNKPNEGSVKRRNEKKR+RQ R
Sbjct: 61  DTRFPKRRPSERPRRKRASLRPSGPYAWVQYTPGQPILPNKPNEGSVKRRNEKKRMRQRR 120

Query: 118 AFVLA 122
           AF+L 
Sbjct: 121 AFILV 125