Miyakogusa Predicted Gene

Lj0g3v0241729.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0241729.1 tr|G7ID38|G7ID38_MEDTR Alpha-L-fucosidase
OS=Medicago truncatula GN=MTR_1g102230 PE=4 SV=1,83.33,0,seg,NULL;
(Trans)glycosidases,Glycoside hydrolase, superfamily;
Alpha_L_fucos,Glycoside hydrolase, f,CUFF.15794.1
         (481 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g38670.1                                                       793   0.0  
Glyma20g29080.1                                                       791   0.0  
Glyma13g39750.1                                                       412   e-115
Glyma12g30150.1                                                       120   4e-27

>Glyma10g38670.1 
          Length = 487

 Score =  793 bits (2048), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/482 (79%), Positives = 422/482 (87%), Gaps = 8/482 (1%)

Query: 1   MARLCHSSFLITTLLLQFFSFCISWHEQVVXXXXXXXXXXXXFSQLKWQQREIIMFLHFG 60
           M RL  SS  IT L  Q    CISW  Q              +SQLKWQQREIIMF HFG
Sbjct: 1   MVRLWCSSLSITLLFQQLIRLCISWSVQTPTPPLPILPLPT-YSQLKWQQREIIMFFHFG 59

Query: 61  VNTFSDREWGTGHESPAIFNPTGLSTAQWANVAAEAGISLMILTAKHHDGFCLWPSKYTK 120
           VNTFSDREWGTG E+PAIFNPTGL+T QWA VAA+AG+SLMILTAKHHDGFCLWPSKYT 
Sbjct: 60  VNTFSDREWGTGQENPAIFNPTGLNTTQWATVAADAGVSLMILTAKHHDGFCLWPSKYTD 119

Query: 121 HSVISSPWQGGKGDVVGEFVNAASAQGIDVGIYLSPWDRHDSRYGHDLLYNEYYMAQLQE 180
           HSVISSPWQGGKGDVV +FVNAA+AQGIDVG+YLSPWDRHD RYG+DLLYN+YY+AQLQE
Sbjct: 120 HSVISSPWQGGKGDVVQDFVNAATAQGIDVGVYLSPWDRHDPRYGNDLLYNQYYLAQLQE 179

Query: 181 LLNKYQNVREIWFDGAKDPKAQNVSNYFSDWFSMVKELQSSINIFSDAGPDVRWVGDETG 240
           LL KY NVREIWFDGAK   A+N++ YFSDWFSMVKELQSSINIFSDAGPDVRWVGDETG
Sbjct: 180 LLKKYPNVREIWFDGAKGANAKNMTYYFSDWFSMVKELQSSINIFSDAGPDVRWVGDETG 239

Query: 241 SAGYTCWSTINRTSLAIGSPNISKYLSTGDPRGTDWLPAECDVSIRKGWFWHKSESPRKL 300
           SAGYTCWSTINRTSL+IGSP+I +Y++TGDP+GTDWLPAECDVSIRKGWFWHKSESP+KL
Sbjct: 240 SAGYTCWSTINRTSLSIGSPDIIQYINTGDPKGTDWLPAECDVSIRKGWFWHKSESPKKL 299

Query: 301 SELLDIYYNSVGRNCVLLLNVPPNTTGLISDTDAHRLKELRSAINTIFHKNLAEDCYVKV 360
           SELLDIYYNSVGRNCVLLLNVPPNT+GLI++ DA+RLKE RSAI TIFH+NLAEDC+VKV
Sbjct: 300 SELLDIYYNSVGRNCVLLLNVPPNTSGLITEVDANRLKEFRSAIKTIFHQNLAEDCFVKV 359

Query: 361 SSQRGGNEGGFGPENMLDSDHLWSYWAPREEEEGENNDHWIEIWGKDGSLRFNVIRIQEA 420
           SSQR    GGFGPE MLDSDHLWSYWAPR+++  +  DHW+EIW K+G LRFNV+RIQEA
Sbjct: 360 SSQR----GGFGPEKMLDSDHLWSYWAPRDDD--DEKDHWVEIWAKEGRLRFNVVRIQEA 413

Query: 421 IGLGQRIKRHEIYVDGKLIIKGTTVGYKRLHRLD-GDVNAQVVRIRIKKARAVPLISSIG 479
           IGLGQRIKRHEIYVDGKLIIK TTVGYKRLHRLD G+V+A+ VRIRI+KAR VPLISSIG
Sbjct: 414 IGLGQRIKRHEIYVDGKLIIKATTVGYKRLHRLDGGEVHARGVRIRIRKARGVPLISSIG 473

Query: 480 LH 481
           LH
Sbjct: 474 LH 475


>Glyma20g29080.1 
          Length = 487

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/482 (79%), Positives = 424/482 (87%), Gaps = 8/482 (1%)

Query: 1   MARLCHSSFLITTLLLQFFSFCISWHEQVVXXXXXXXXXXXXFSQLKWQQREIIMFLHFG 60
           M RL  SS L+T L  Q    CISW  Q              +SQL+WQQREIIMFLHFG
Sbjct: 1   MVRLWCSSLLMTILFQQLIRLCISWSVQTPTPPLPILPLPT-YSQLQWQQREIIMFLHFG 59

Query: 61  VNTFSDREWGTGHESPAIFNPTGLSTAQWANVAAEAGISLMILTAKHHDGFCLWPSKYTK 120
           VNTF+DREWGTG E+PAIFNPTGL+T QWA VAA+AG+SLMILTAKHHDGFCLWPSKYT 
Sbjct: 60  VNTFTDREWGTGQENPAIFNPTGLNTTQWATVAADAGVSLMILTAKHHDGFCLWPSKYTD 119

Query: 121 HSVISSPWQGGKGDVVGEFVNAASAQGIDVGIYLSPWDRHDSRYGHDLLYNEYYMAQLQE 180
           HSVISSPWQGGKGDVV +FVNAA+AQGIDVGIYLSPWDRHD RYG+DLLYN+YY+AQLQE
Sbjct: 120 HSVISSPWQGGKGDVVQDFVNAATAQGIDVGIYLSPWDRHDPRYGNDLLYNQYYLAQLQE 179

Query: 181 LLNKYQNVREIWFDGAKDPKAQNVSNYFSDWFSMVKELQSSINIFSDAGPDVRWVGDETG 240
           LL KY NVREIWFDGAK   A+N++ YFSDWFSMVKELQSSINIFSDAGPDVRWVGDETG
Sbjct: 180 LLKKYSNVREIWFDGAKGANAKNMTYYFSDWFSMVKELQSSINIFSDAGPDVRWVGDETG 239

Query: 241 SAGYTCWSTINRTSLAIGSPNISKYLSTGDPRGTDWLPAECDVSIRKGWFWHKSESPRKL 300
           SAGYTCWSTINRTSL+IGSP+I +Y++TGDP+GTDWLPAECDVSIR GWFWHKSESP+KL
Sbjct: 240 SAGYTCWSTINRTSLSIGSPDIIQYINTGDPKGTDWLPAECDVSIRHGWFWHKSESPKKL 299

Query: 301 SELLDIYYNSVGRNCVLLLNVPPNTTGLISDTDAHRLKELRSAINTIFHKNLAEDCYVKV 360
           SELLDIYYNSVGRNCVLLLNVPPNT+GLI++ DA+RLKE RSAINTIFH+NLAEDC+VKV
Sbjct: 300 SELLDIYYNSVGRNCVLLLNVPPNTSGLITEADANRLKEFRSAINTIFHQNLAEDCFVKV 359

Query: 361 SSQRGGNEGGFGPENMLDSDHLWSYWAPREEEEGENNDHWIEIWGKDGSLRFNVIRIQEA 420
           SSQR     GFGPE MLDS+HLWSYWAPR +++GE  DHWIEIW K+G  RFNVIRIQEA
Sbjct: 360 SSQR----RGFGPEKMLDSEHLWSYWAPR-DDDGE-KDHWIEIWAKEGKFRFNVIRIQEA 413

Query: 421 IGLGQRIKRHEIYVDGKLIIKGTTVGYKRLHRLD-GDVNAQVVRIRIKKARAVPLISSIG 479
           IGLGQRIKRHEIYVDGKLIIK TTVGYKRLHRL+ G+V+A+VVRIRI+KAR VPLISSIG
Sbjct: 414 IGLGQRIKRHEIYVDGKLIIKATTVGYKRLHRLNGGEVHARVVRIRIRKARGVPLISSIG 473

Query: 480 LH 481
           LH
Sbjct: 474 LH 475


>Glyma13g39750.1 
          Length = 464

 Score =  412 bits (1060), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 212/435 (48%), Positives = 283/435 (65%), Gaps = 15/435 (3%)

Query: 53  IIMFLHFGVNTFSDREWGTGHESPAIFNPTGLSTAQWANVAAEAGISLMILTAKHHDGFC 112
           + +F HFG NTF+D EWGTGH +P +FNPT L+ +QW  VA ++G S +ILT KHHDGFC
Sbjct: 1   MALFFHFGTNTFTDSEWGTGHANPTVFNPTKLNASQWIRVAKDSGFSRVILTVKHHDGFC 60

Query: 113 LWPSKYTKHSVISSPWQGGKGDVVGEFVNAASAQGIDVGIYLSPWDRHDSRYGHDLLYNE 172
           LWPS YT ++V SS W+ G GDVV E   AA   G+ +G YLSPWDRH++ YG  L YNE
Sbjct: 61  LWPSDYTNYTVRSSNWRNGNGDVVAELAAAAKDAGVGLGFYLSPWDRHEACYGDTLQYNE 120

Query: 173 YYMAQLQELLNKYQNVREIWFDGAKDPKAQNVSNYFSDWFSMVKELQSSINIFSDAGPDV 232
           +Y+AQ+ ELL +Y  V++I+ D AK+ +  ++   F  WFS++ +LQ    +FSD GPD 
Sbjct: 121 FYLAQMTELLTRYGEVKDIFLDAAKEDET-DMHYLFDSWFSLIHQLQPGAIVFSDLGPDT 179

Query: 233 RWVGDETGSAGYTCWSTINRTSLAIGSPNISKYLSTGDPRGTDWLPAECDVSIRKGWFWH 292
           RW G+E G+AG TCWS  N+T   IG  + ++Y S GD  G DWLPA CDVSIR GWFWH
Sbjct: 180 RWAGNEYGAAGSTCWSLYNKTGYEIGYID-NQYNSEGDQFGPDWLPATCDVSIRTGWFWH 238

Query: 293 KSESPRKLSELLDIYYNSVGRNCVLLLNVPPNTTGLISDTDAHRLKELRSAINTIFHKNL 352
            SE P+    LL+IYY SVGRNC LLLNVPPN++GLISD D   L+E      +IF  NL
Sbjct: 239 ASEQPKSARSLLEIYYKSVGRNCQLLLNVPPNSSGLISDEDIQVLQEFAELKRSIFSHNL 298

Query: 353 AEDCYVKVSSQRGG-NEGGFGPENMLDSDHLWSYWAPREEEEGENNDHWIEIWGKDGSLR 411
           A +  +  SS RGG  E  F P N+L+ + +++YWAP      EN   WI        + 
Sbjct: 299 AINAVINASSIRGGIQETHFSPYNVLE-EGIYTYWAPW-----ENQSKWILYIDLQELVS 352

Query: 412 FNVIRIQEAIGLGQRIKRHEIYV---DG--KLIIKGTTVGYKRLHRLDGDVNAQVVRIRI 466
           FNV+++QE I +GQR+    +     DG    ++ GTT+GY+RL  L   + AQ +++ +
Sbjct: 353 FNVLQLQEPINMGQRVIEFHLEALSPDGVWMRVVNGTTIGYQRL-LLFPKLKAQYLKLVM 411

Query: 467 KKARAVPLISSIGLH 481
            K+RA PLIS  G++
Sbjct: 412 DKSRADPLISYFGIY 426


>Glyma12g30150.1 
          Length = 410

 Score =  120 bits (300), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 74/122 (60%), Gaps = 1/122 (0%)

Query: 185 YQNVREIWFDGAKDPKAQNVSNYFSDWFSMVKELQSSINIFSDAGPDVRWVGDETGSAGY 244
           Y  +++I+ DG K      ++  F  W S++ +LQ     FSD GPD RW+G+E G+AG 
Sbjct: 290 YGEIKDIFLDGTKGDGETEMNYLFDSWISLIHQLQPGATNFSDLGPDTRWIGNEYGAAGS 349

Query: 245 TCWSTINRTSLAIGSPNISKYLSTGDPRGTDWLPAECDVSIRKGWFWHKSESPRKLSELL 304
           TCWS  N+T   IG  + S+Y S GD    DW+PA CDVSIR  WFWH SE P+    LL
Sbjct: 350 TCWSLYNKTGCEIGYID-SQYNSEGDQFCPDWIPATCDVSIRPSWFWHASEQPKSARSLL 408

Query: 305 DI 306
           +I
Sbjct: 409 EI 410



 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 50/71 (70%), Gaps = 5/71 (7%)

Query: 45  QLKWQQREIIMFLHFGVNTFSDREWGTGHESPAIFNPTGLSTAQWANVAAEAGISLMILT 104
           QL+WQ   + +F HFG NTF+D EWGTGH      NPT L+ +QW  VA ++G SL+ILT
Sbjct: 88  QLQWQLGGMALFFHFGTNTFTDSEWGTGHS-----NPTKLNASQWIRVAKDSGFSLVILT 142

Query: 105 AKHHDGFCLWP 115
            KHHDGF LWP
Sbjct: 143 VKHHDGFFLWP 153