Miyakogusa Predicted Gene

Lj0g3v0241139.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0241139.1 Non Chatacterized Hit- tr|I1PPH5|I1PPH5_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,45.28,4e-18,seg,NULL; LEUCINE-RICH REPEAT-CONTAINING
PROTEIN,NULL,gene.g18857.t1.1
         (113 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g18210.1                                                       119   1e-27
Glyma09g06920.1                                                       117   3e-27
Glyma17g06490.1                                                       105   1e-23

>Glyma15g18210.1 
          Length = 363

 Score =  119 bits (297), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 1/90 (1%)

Query: 3   LQKLSVEGNPLVSPPMEVVEQGLHVVKEFMCHKMNSEHKIPT-KRSWIRKLVKLGTFNGY 61
           LQKLSVEGNPL  PPMEVVEQGLHVV E+M HK+NS  +  T KR W+ K+VK GTFN  
Sbjct: 255 LQKLSVEGNPLTCPPMEVVEQGLHVVMEYMHHKINSSDQNKTKKRWWMGKIVKCGTFNKQ 314

Query: 62  ERRGKRSEHKGIDMLQYQPINGLATPGFLG 91
            R GKR EH G +ML++Q INGLA+PGF+G
Sbjct: 315 FRNGKRPEHVGYNMLKHQNINGLASPGFMG 344


>Glyma09g06920.1 
          Length = 355

 Score =  117 bits (293), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 1/90 (1%)

Query: 3   LQKLSVEGNPLVSPPMEVVEQGLHVVKEFMCHKMNSEHKIPT-KRSWIRKLVKLGTFNGY 61
           LQKLSVEGNPL  PPMEVVEQGLHVV E+M HKMNS  +  T KR WI K+VK GTFN  
Sbjct: 247 LQKLSVEGNPLTCPPMEVVEQGLHVVMEYMHHKMNSSDQNKTKKRWWIGKIVKCGTFNKQ 306

Query: 62  ERRGKRSEHKGIDMLQYQPINGLATPGFLG 91
            R GKR E++G +ML++Q INGLA+PG +G
Sbjct: 307 MRGGKRPENEGYNMLKHQNINGLASPGLMG 336


>Glyma17g06490.1 
          Length = 344

 Score =  105 bits (262), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/98 (52%), Positives = 69/98 (70%), Gaps = 8/98 (8%)

Query: 2   KLQKLSVEGNPLVSPPMEVVEQGLHVVKEFMCHKMNSEHKIPT-----KRSWIRKLVKLG 56
           KLQK+SVEGNPL SPP E+VEQGLH VKE++C KMN+ H+ PT      +SW+ +LV+ G
Sbjct: 231 KLQKISVEGNPLSSPPPELVEQGLHAVKEYLCQKMNAGHQSPTTNNKKSKSWVGRLVRYG 290

Query: 57  TFNGYERR---GKRSEHKGIDMLQYQPINGLATPGFLG 91
           TFNG  +    G R E +   +  Y+PI+GLA+P ++G
Sbjct: 291 TFNGIGQSRAAGAREEREAFIVPDYRPIDGLASPRYMG 328