Miyakogusa Predicted Gene

Lj0g3v0239839.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0239839.1 Non Chatacterized Hit- tr|C5XY07|C5XY07_SORBI
Putative uncharacterized protein Sb04g007400 OS=Sorghu,42.76,3e-19,ABC
TRANSPORTER,NULL; ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A
(ABCA),ABC transporter A,
ABCA,NODE_40083_length_417_cov_39.980816.path3.1
         (152 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g34130.1                                                       253   6e-68
Glyma06g20370.1                                                       214   2e-56
Glyma05g01230.1                                                       166   1e-41
Glyma17g10670.1                                                       149   9e-37
Glyma04g22240.1                                                        95   3e-20
Glyma03g05850.1                                                        64   7e-11

>Glyma04g34130.1 
          Length = 949

 Score =  253 bits (646), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 122/152 (80%), Positives = 133/152 (87%)

Query: 1   MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
           MMKMHGL DGPYW+ISYGYFLAIS +Y+LCFVIFGSVIGL FFTMNDYSIQ VFYF++IN
Sbjct: 383 MMKMHGLDDGPYWMISYGYFLAISIVYMLCFVIFGSVIGLNFFTMNDYSIQSVFYFIYIN 442

Query: 61  LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
           LQISLAFLLA LFSNVKTA V AYIG+FGTG L      FFVQ+ SF RGWIIVMELYPG
Sbjct: 443 LQISLAFLLASLFSNVKTATVLAYIGMFGTGLLADFPFHFFVQDTSFPRGWIIVMELYPG 502

Query: 121 FSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
           F+L+RGLYEFSQ +F+GDALGT GMRW DLSD
Sbjct: 503 FALYRGLYEFSQYAFSGDALGTDGMRWSDLSD 534


>Glyma06g20370.1 
          Length = 888

 Score =  214 bits (546), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 107/152 (70%), Positives = 117/152 (76%), Gaps = 21/152 (13%)

Query: 1   MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
           MMKMHGLGDGPYW+ISYG                     L FFTMNDYSIQFVFYF++IN
Sbjct: 343 MMKMHGLGDGPYWMISYG---------------------LNFFTMNDYSIQFVFYFIYIN 381

Query: 61  LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
           LQISLAFLLA LFSNVKTA V AYIGVFGTG L   L QFFVQ+ SF RGWI+VMELYPG
Sbjct: 382 LQISLAFLLASLFSNVKTATVLAYIGVFGTGLLAGFLFQFFVQDTSFPRGWIVVMELYPG 441

Query: 121 FSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
           F+L+RGLYEFSQ +F+GDALG+ GMRW DLSD
Sbjct: 442 FALYRGLYEFSQYAFSGDALGSDGMRWSDLSD 473


>Glyma05g01230.1 
          Length = 909

 Score =  166 bits (419), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 81/115 (70%), Positives = 95/115 (82%)

Query: 38  IGLKFFTMNDYSIQFVFYFLFINLQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASL 97
           +GLK FT+NDYSIQFVFYF++INLQI+LAFL+A +FSNVKTA V AYIGVFGTG L   L
Sbjct: 381 LGLKIFTINDYSIQFVFYFIYINLQIALAFLVASIFSNVKTATVTAYIGVFGTGLLAGFL 440

Query: 98  LQFFVQEKSFSRGWIIVMELYPGFSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
            QFFVQ  SF RGWIIVMELYPGF+L+RGLYE +Q SF G +  T GM+W +LS+
Sbjct: 441 FQFFVQNTSFPRGWIIVMELYPGFALYRGLYELAQFSFEGSSSETGGMKWQNLSE 495


>Glyma17g10670.1 
          Length = 894

 Score =  149 bits (377), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 79/115 (68%), Positives = 95/115 (82%)

Query: 38  IGLKFFTMNDYSIQFVFYFLFINLQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASL 97
           +GLK FT+NDYSIQFVFYF++INLQI+LAF++A +FSNVKTA V AYIGVFGTG L   L
Sbjct: 366 LGLKIFTINDYSIQFVFYFIYINLQIALAFMVASIFSNVKTATVTAYIGVFGTGLLAVFL 425

Query: 98  LQFFVQEKSFSRGWIIVMELYPGFSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
            QFFVQ  SF RGWIIVME YPGF+L+RGLYE +Q SF G + G+ GM+W +LS+
Sbjct: 426 FQFFVQNTSFPRGWIIVMEFYPGFALYRGLYELAQFSFQGSSSGSGGMKWQNLSE 480


>Glyma04g22240.1 
          Length = 136

 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 55/75 (73%)

Query: 45  MNDYSIQFVFYFLFINLQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQE 104
           MNDY+IQFVFYF++INLQISLAFLLA LFSNVK A V AYIGVFG G L   L QFFVQ+
Sbjct: 1   MNDYNIQFVFYFIYINLQISLAFLLASLFSNVKLATVLAYIGVFGAGLLAGFLFQFFVQD 60

Query: 105 KSFSRGWIIVMELYP 119
            SF        E+ P
Sbjct: 61  TSFPSKSKSDREMIP 75


>Glyma03g05850.1 
          Length = 182

 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 33/49 (67%), Positives = 39/49 (79%)

Query: 41  KFFTMNDYSIQFVFYFLFINLQISLAFLLACLFSNVKTAAVFAYIGVFG 89
           K F  ++  IQF+FYF++INLQISLAFLLA LFS VKTA V AYIG+F 
Sbjct: 72  KSFVPSEPIIQFLFYFIYINLQISLAFLLASLFSKVKTATVLAYIGLFN 120