Miyakogusa Predicted Gene

Lj0g3v0238209.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0238209.1 tr|B6TTK7|B6TTK7_MAIZE Actin associated protein
OS=Zea mays PE=2 SV=1,39.87,3e-18,seg,NULL,CUFF.15615.1
         (123 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g00870.1                                                       129   5e-31
Glyma17g06960.1                                                       128   1e-30

>Glyma13g00870.1 
          Length = 128

 Score =  129 bits (325), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 68/116 (58%), Positives = 71/116 (61%), Gaps = 5/116 (4%)

Query: 1   MAVNSESTPPPVIGKIGPYTVFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPS 60
           M++NSESTPPP+IGKIGPYTVFM                                  V  
Sbjct: 1   MSINSESTPPPLIGKIGPYTVFMTPPSTPKPSDDHPVTTKIAPPPPQIPKAVPSPKPV-- 58

Query: 61  SAKSFSDGSVSGFFRNAVTKVHNAHSSLDDHLARWFGLNQSKYQWALDDYYESKGM 116
              S  D SV GFFRNAVTKV  AHSSLDDHLARWFGLNQSKYQWALDDYYESKGM
Sbjct: 59  ---SDPDDSVFGFFRNAVTKVQTAHSSLDDHLARWFGLNQSKYQWALDDYYESKGM 111


>Glyma17g06960.1 
          Length = 131

 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/119 (58%), Positives = 73/119 (61%), Gaps = 8/119 (6%)

Query: 1   MAVNSESTPPPVIGKIGPYTVFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPS 60
           M++NSESTPPPVIGKIGPYTVFM                                  VPS
Sbjct: 1   MSINSESTPPPVIGKIGPYTVFMTPPSTPKPADDNPVTTTKIAPPPPQIPKA-----VPS 55

Query: 61  SAK---SFSDGSVSGFFRNAVTKVHNAHSSLDDHLARWFGLNQSKYQWALDDYYESKGM 116
                 S SD SV GFFRNAV KV  AHSSLDDHLARWFGLNQSKYQWALDDYYESKG+
Sbjct: 56  PKPKPLSDSDDSVFGFFRNAVAKVQTAHSSLDDHLARWFGLNQSKYQWALDDYYESKGV 114