Miyakogusa Predicted Gene

Lj0g3v0236509.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0236509.1 Non Chatacterized Hit- tr|H2XT65|H2XT65_CIOIN
Uncharacterized protein (Fragment) OS=Ciona
intestinal,45.9,5e-19,FAD/NAD(P)-binding domain,NULL; FAD
OXIDOREDUCTASE,NULL; FAD NAD BINDING OXIDOREDUCTASES,NULL;
DAO,F,CUFF.15488.1
         (159 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g21110.1                                                       200   5e-52
Glyma17g18320.1                                                       194   4e-50
Glyma05g21130.1                                                       125   2e-29

>Glyma05g21110.1 
          Length = 376

 Score =  200 bits (509), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 94/125 (75%), Positives = 109/125 (87%), Gaps = 2/125 (1%)

Query: 36  SGEVYVCGMSSEEEVPDDRDEIRGKPESIEMLKRVAKTVSSHLGEET--VKAEQACFLPC 93
           +GEVY+CG+   EEVPDD +EIR  PE  E+L+RVAK VSS+LGEE   VKAEQACFLPC
Sbjct: 250 TGEVYLCGVGEVEEVPDDPEEIRSNPEWKELLRRVAKNVSSYLGEEVARVKAEQACFLPC 309

Query: 94  TDDGVPVIGEVPGIKGCYVATGHNCWGILNGPATGGAMAELIIDGNSSIVDLKRFSPARF 153
           TDDGVPVIGEVPG+KGCYVATGHNCWGILNGPATG A+AEL++DG+SSIV LKRFSPARF
Sbjct: 310 TDDGVPVIGEVPGVKGCYVATGHNCWGILNGPATGAAVAELVVDGHSSIVALKRFSPARF 369

Query: 154 VAPTK 158
           +  ++
Sbjct: 370 LGLSR 374


>Glyma17g18320.1 
          Length = 412

 Score =  194 bits (492), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 101/125 (80%), Positives = 112/125 (89%), Gaps = 2/125 (1%)

Query: 36  SGEVYVCGMSSEEEVPDDRDEIRGKPESIEMLKRVAKTVSSHLGE--ETVKAEQACFLPC 93
           +GEVY+CGMS EEEVPDD +EIRG PESI MLK+VAKTVSS+LGE    +KAEQACFLPC
Sbjct: 287 TGEVYICGMSKEEEVPDDPEEIRGNPESIAMLKKVAKTVSSYLGEGVARMKAEQACFLPC 346

Query: 94  TDDGVPVIGEVPGIKGCYVATGHNCWGILNGPATGGAMAELIIDGNSSIVDLKRFSPARF 153
           TDDGVPVIGEVPG+KGCYVATGHNCWGILNGPATG A+AEL+IDG+SSIVDLK FSPARF
Sbjct: 347 TDDGVPVIGEVPGVKGCYVATGHNCWGILNGPATGAAVAELVIDGHSSIVDLKHFSPARF 406

Query: 154 VAPTK 158
           +   K
Sbjct: 407 LGRRK 411


>Glyma05g21130.1 
          Length = 323

 Score =  125 bits (314), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 82/124 (66%), Gaps = 23/124 (18%)

Query: 36  SGEVYVCGMSSEEEVPDDRDEIRGKPESIEMLKRVAKTVSSHLGEETVKAEQACFLPCTD 95
           +GEVY+CGMS E+EV D+R+EI+G PE I MLK+V KTVSSHL E               
Sbjct: 223 TGEVYICGMSKEKEVSDNREEIKGNPELIVMLKKVVKTVSSHLRE--------------- 267

Query: 96  DGVPVIGEVPGIKGCYVATGHNCWGILNGPATGGAMAELIIDGNSSIVDLKRFSPARFVA 155
                   V  +KGCYVATGHN   ILNGPAT G +AEL+IDG+S+IV+LKRFSP RF+ 
Sbjct: 268 -------GVAWVKGCYVATGHNWDNILNGPAT-GVVAELVIDGHSNIVNLKRFSPTRFLG 319

Query: 156 PTKT 159
             K 
Sbjct: 320 RRKA 323