Miyakogusa Predicted Gene
- Lj0g3v0235939.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0235939.1 Non Chatacterized Hit- tr|A3BPR4|A3BPR4_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,51.69,2e-16,SUBFAMILY NOT NAMED,NULL; OXYSTEROL-BINDING
PROTEIN-RELATED,Oxysterol-binding protein; seg,NULL; Ple,CUFF.15471.1
(261 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g43220.1 349 2e-96
Glyma06g11470.1 293 1e-79
Glyma04g38330.1 233 1e-61
Glyma06g16720.1 233 2e-61
Glyma18g01590.1 192 3e-49
Glyma11g37650.1 187 1e-47
Glyma14g33410.2 163 1e-40
Glyma14g33410.1 163 2e-40
Glyma13g02610.1 160 1e-39
Glyma17g14820.1 152 4e-37
Glyma11g03420.2 137 9e-33
Glyma11g03420.1 137 9e-33
Glyma05g04340.1 130 2e-30
>Glyma04g43220.1
Length = 783
Score = 349 bits (895), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/262 (70%), Positives = 201/262 (76%), Gaps = 24/262 (9%)
Query: 1 MHPLCCVSAITDNSSPVKPSPSAGPLAGLSMPPFPSAVRSESFPRPAGHGHVSHSVTNGG 60
MHP CCVSAI+D +SPVKPS + + L SAVRS+ PR + G
Sbjct: 1 MHPFCCVSAISDQASPVKPSFADFAMPPLPAAAAASAVRSDLAPRHSHSG---------- 50
Query: 61 DCSRASXXXXXLPSTSTSVAVDVRINDLVGNGISGILHKWVNYGKGWRPRWFVLQDGVLS 120
S VDV+INDLVGNGISGIL+KWVNYGKGWRPRWFVLQDGVLS
Sbjct: 51 -------------SQREQPVVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLS 97
Query: 121 YYKIHGPDKIVVNPETEKGSKVIGDESMRIISRNRKS-HRSLQRKPFGEIHLKVSTIRES 179
YYKIHGPDKIVVN ETEKGS VIG+ESMR I+RNR S H RKPFGEIHL+VSTIRES
Sbjct: 98 YYKIHGPDKIVVNQETEKGSMVIGEESMRRITRNRNSYHPQHIRKPFGEIHLQVSTIRES 157
Query: 180 KSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMAPVDNVGISTE 239
KSD+KRFS+FTGTKRLHLRAETREDRVAW EALQAVKDMFPRMSNSELMAPVDNV +STE
Sbjct: 158 KSDEKRFSVFTGTKRLHLRAETREDRVAWTEALQAVKDMFPRMSNSELMAPVDNVTVSTE 217
Query: 240 KLRNRLQQEGLNEAAIQDSEQI 261
KLR RL +EG++EAAIQDSEQI
Sbjct: 218 KLRVRLMEEGVSEAAIQDSEQI 239
>Glyma06g11470.1
Length = 777
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 166/272 (61%), Positives = 184/272 (67%), Gaps = 50/272 (18%)
Query: 1 MHPLCCVSAITDNSSPVKPSPSAGPLAGLSMPPFPSAVRSESFPRPAGHGHVSHSVTNGG 60
MHP CCVSAI+D +SPVKPS + + L + VRS+S PR + SHS +
Sbjct: 1 MHPFCCVSAISDQASPVKPSFADFAMPPLPAAAAATTVRSDSAPRHSHKHSHSHSGSQRE 60
Query: 61 DCSRASXXXXXLPSTSTSVAVDVRINDLVGNGISGILHKWVNYGKGWRPRWFVLQDGVLS 120
WVNYGKGWRPRWFVLQDGVLS
Sbjct: 61 -------------------------------------QPWVNYGKGWRPRWFVLQDGVLS 83
Query: 121 YYKIHGPDKIVVNPETEKGSKVIGDESMRIISRNRKSHRSLQ-RKPFGEIHLK------- 172
YYKIHGPDKIVVNPETEKGS VIG+ESMR I+RNR S+ S RKPFGEIHLK
Sbjct: 84 YYKIHGPDKIVVNPETEKGSMVIGEESMRRITRNRNSYPSQHIRKPFGEIHLKARPSSTP 143
Query: 173 ---VSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMA 229
+S I SKSD+KRFS+FTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMA
Sbjct: 144 GNLISII--SKSDEKRFSVFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMA 201
Query: 230 PVDNVGISTEKLRNRLQQEGLNEAAIQDSEQI 261
PVDNV +STEKLR RL +EG++EAAIQDSEQI
Sbjct: 202 PVDNVTVSTEKLRVRLMEEGVSEAAIQDSEQI 233
>Glyma04g38330.1
Length = 737
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/186 (59%), Positives = 150/186 (80%), Gaps = 2/186 (1%)
Query: 77 TSVAVDVRINDLVGNGISGILHKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNPET 136
T+ +V + D+VG+GISGIL+KWVNYG+GWRPRWFVL DGVLSYY IHGPDK+V+N E
Sbjct: 46 TATRNEVMLKDIVGSGISGILYKWVNYGRGWRPRWFVLHDGVLSYYNIHGPDKLVLNHEV 105
Query: 137 EKGSKVIGDESMRIISRNRKSHRSLQRKPFGEIHLKVSTIRESKSDDKRFSIFTGT-KRL 195
E + VIG+ES+R I+ +R S KP EIHL V ++RE++SD++RFS+ TGT KRL
Sbjct: 106 EAEAMVIGEESLRRINSHRHC-PSRNHKPVSEIHLMVCSVRENRSDERRFSVCTGTKKRL 164
Query: 196 HLRAETREDRVAWMEALQAVKDMFPRMSNSELMAPVDNVGISTEKLRNRLQQEGLNEAAI 255
HLRAE++EDR W++A+ AVKD+FPR+SN+E M+PV +V +STE+LR+RL EG++E AI
Sbjct: 165 HLRAESKEDRATWVKAMMAVKDLFPRLSNAEAMSPVASVLVSTERLRDRLLMEGVSETAI 224
Query: 256 QDSEQI 261
++SE+I
Sbjct: 225 RESEEI 230
>Glyma06g16720.1
Length = 747
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 149/189 (78%), Gaps = 8/189 (4%)
Query: 77 TSVAVDVRINDLVGNGISGILHKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNPET 136
T+ +V +N++VGNG+SGIL+KWVNYG+GWRPRWF+L DGVLSYYKIHGPDK+V+N E
Sbjct: 33 TTTRNEVMLNNIVGNGVSGILYKWVNYGRGWRPRWFILHDGVLSYYKIHGPDKLVLNREV 92
Query: 137 EKGSKVIGDESMRIISRNRKSHR---SLQRKPFGEIHLKVSTIRESKSDDKRFSIFTGT- 192
E G+ VIG+ES+R I+ SHR S RKP EIHL V ++RE+ SD++RFS+ TGT
Sbjct: 93 ETGAMVIGEESLRRIN----SHRHCPSRNRKPVSEIHLMVCSVRENSSDERRFSVSTGTK 148
Query: 193 KRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMAPVDNVGISTEKLRNRLQQEGLNE 252
KRLHLRAE+REDR +W+EA+ AVKD+FPR+ SE M+P + +ST++LR+RL EG+ E
Sbjct: 149 KRLHLRAESREDRASWVEAMSAVKDLFPRLPKSEAMSPFSSPLVSTQRLRDRLLMEGVRE 208
Query: 253 AAIQDSEQI 261
AI++ E+I
Sbjct: 209 TAIREVEEI 217
>Glyma18g01590.1
Length = 823
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/285 (43%), Positives = 170/285 (59%), Gaps = 32/285 (11%)
Query: 1 MHPLCCVSAIT---DNSSPV-KPSPSAGPLAGLSMPPFPSAVRSESFPRPAGHGHVSHSV 56
M+PLCC++ ++ D ++PV SPS L +++R+ ++ + SV
Sbjct: 1 MNPLCCIAPVSIDRDRANPVVAKSPSQCQLG------LDASIRTVNYASKSSFSTQDSSV 54
Query: 57 TNGGDCSRASXXXXXLPSTS--TSVAVDVRINDLVGNGISGILHKWVNYGKGWRPRWFVL 114
G D +A+ S A V ++GIL+KWVNYGKGWR RWFVL
Sbjct: 55 --GADSVKATAAADLEEEEEPRDSKAFAGGNGGGVAGSVAGILYKWVNYGKGWRSRWFVL 112
Query: 115 QDGVLSYYKIHGPDKIVVNPETEKGSKVIGDESMRIISR---NRKSHRSL---------- 161
+DGVLSYYKIHGPDKI+++P ++ +VIG+ES + + + N +R+
Sbjct: 113 EDGVLSYYKIHGPDKILMSPARDRSVRVIGEESSKFVKKANWNLNLNRASSGGGVGGGNN 172
Query: 162 -----QRKPFGEIHLKVSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVK 216
Q KPFGEIHLKVS++R SKSDDKR SIFTGTK LHLR +REDR W+EALQ+ K
Sbjct: 173 SNNGKQCKPFGEIHLKVSSVRSSKSDDKRLSIFTGTKTLHLRCVSREDRAMWIEALQSAK 232
Query: 217 DMFPRMSNSELMAPVDNVGISTEKLRNRLQQEGLNEAAIQDSEQI 261
D+FPR S +A +++ +STEKLR RL QEG++E I D E I
Sbjct: 233 DLFPRALTSSDLATSEDIVVSTEKLRLRLSQEGISETIINDCESI 277
>Glyma11g37650.1
Length = 824
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/286 (43%), Positives = 168/286 (58%), Gaps = 33/286 (11%)
Query: 1 MHPLCCVSAIT-DNSSP---VKPSPSAGPLAGLSMPPFPSAVRSESFPRPAGHGHVSHSV 56
M+PLCC++ ++ D P + SP+ L +++R+ + + SV
Sbjct: 1 MNPLCCIAPVSIDRDRPNHVLAKSPAQCQLG------LDASIRTVNHASKSSSSTQDSSV 54
Query: 57 TNGGDCSRASXXXXXLPSTST---SVAVDVRINDLVGNGISGILHKWVNYGKGWRPRWFV 113
D +A+ LP S A V ++GIL+KWVNYGKGWR RWFV
Sbjct: 55 --AVDSVKATSAVADLPEEEEPRDSKAFSGGNGGGVAGSVAGILYKWVNYGKGWRSRWFV 112
Query: 114 LQDGVLSYYKIHGPDKIVVNPETEKGSKVIGDESMRIISR---NRKSHRSL--------- 161
L+DGVLSYYKIHGPDKI+++P ++ +VIG+ES + + + N +R+
Sbjct: 113 LEDGVLSYYKIHGPDKILMSPAKDRSVRVIGEESSKFVKKANWNLNLNRASSGGGVGGGN 172
Query: 162 ------QRKPFGEIHLKVSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAV 215
Q KPFGEIHLKVS++R SKSDDKR SIFTGTK LHLR +REDR W+EALQ+
Sbjct: 173 SSNNGKQCKPFGEIHLKVSSVRSSKSDDKRLSIFTGTKTLHLRCVSREDRAMWIEALQSA 232
Query: 216 KDMFPRMSNSELMAPVDNVGISTEKLRNRLQQEGLNEAAIQDSEQI 261
KD+FPR S +A +++ +STEKLR+RL QE ++E I D E I
Sbjct: 233 KDLFPRALTSSDLATSEDIVVSTEKLRSRLSQESISETIINDCESI 278
>Glyma14g33410.2
Length = 701
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/89 (89%), Positives = 87/89 (97%)
Query: 173 VSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMAPVD 232
VSTIRES+SDDKRFSIFTGTKRLHLRA+TREDRVAWMEALQAVKDMFPR+SNSELMAPVD
Sbjct: 72 VSTIRESRSDDKRFSIFTGTKRLHLRADTREDRVAWMEALQAVKDMFPRISNSELMAPVD 131
Query: 233 NVGISTEKLRNRLQQEGLNEAAIQDSEQI 261
NV ISTEKLR+RL +EG++EAAIQDSEQI
Sbjct: 132 NVAISTEKLRHRLVEEGVSEAAIQDSEQI 160
>Glyma14g33410.1
Length = 704
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/89 (89%), Positives = 87/89 (97%)
Query: 173 VSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMAPVD 232
VSTIRES+SDDKRFSIFTGTKRLHLRA+TREDRVAWMEALQAVKDMFPR+SNSELMAPVD
Sbjct: 72 VSTIRESRSDDKRFSIFTGTKRLHLRADTREDRVAWMEALQAVKDMFPRISNSELMAPVD 131
Query: 233 NVGISTEKLRNRLQQEGLNEAAIQDSEQI 261
NV ISTEKLR+RL +EG++EAAIQDSEQI
Sbjct: 132 NVAISTEKLRHRLVEEGVSEAAIQDSEQI 160
>Glyma13g02610.1
Length = 852
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 88/91 (96%)
Query: 171 LKVSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMAP 230
+ +STIRES+SDDKRFS+FTGTKRLHLRA+TREDRVAW+EALQAVKDMFPR+SNSELMAP
Sbjct: 221 INISTIRESRSDDKRFSVFTGTKRLHLRADTREDRVAWVEALQAVKDMFPRISNSELMAP 280
Query: 231 VDNVGISTEKLRNRLQQEGLNEAAIQDSEQI 261
VDNV +STEKLR+RL +EG++EAAIQD+EQI
Sbjct: 281 VDNVAVSTEKLRHRLMEEGVSEAAIQDTEQI 311
>Glyma17g14820.1
Length = 742
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 147/271 (54%), Gaps = 57/271 (21%)
Query: 1 MHPLCCVSAITDNSSPVKPSPSAGPLAGLSMPPFPSAVRSESFPRPAGHGHVSHSVTNGG 60
MHPLCC+S + P P A L+ R+ S P AG V G
Sbjct: 6 MHPLCCISLESPGIGSDSPEPEAAALS-----------RTRSLP--AGGSDVI--ARRGS 50
Query: 61 DCSRASXXXXXLPSTSTSVAVDVRINDLVGNGISGILHKWVNYGKGWRPRWFVLQDGVLS 120
+ + ++G+L+KW NYGKGWR RWF+L++GVLS
Sbjct: 51 EAT-----------------------------VAGVLYKWTNYGKGWRSRWFLLRNGVLS 81
Query: 121 YYKIHGPDKI-VVNPETEKGSKVIGDESMRIISRN-------RKSHRSLQRKPFGEIHLK 172
Y KI P+ + +++P + ++IG+ + ++R RK+H+ +HLK
Sbjct: 82 YAKIRWPENLNLLSPVDD--VRLIGEVTANRLAREAASATVRRKNHKPPSSSSSSVVHLK 139
Query: 173 VSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPR--MSNSELMAP 230
+S+ RESKSDD+RF IFT TK LHLR ++R+DRVAW++AL + + ++P +S+ +AP
Sbjct: 140 ISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALVSTRGLYPLRPLSDHLSLAP 199
Query: 231 VDNVGISTEKLRNRLQQEGLNEAAIQDSEQI 261
+++ +STE L+ RL +EG +E+ +D EQI
Sbjct: 200 -NHISVSTEGLKKRLLEEGSSESLAKDCEQI 229
>Glyma11g03420.2
Length = 703
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 143/295 (48%), Gaps = 82/295 (27%)
Query: 1 MHPLCCVSAITDNSSPVKPSPSAGPLAGLSMPPFPSAVRSESFPRPAGHGHVSHSVTNGG 60
MHPLCC+S ++ K SP P A R+ S P HG+ +
Sbjct: 6 MHPLCCISL--ESPGIGKHSPEREPAA---------LFRTSSLPAAGSHGNAAQG----- 49
Query: 61 DCSRASXXXXXLPSTSTSVAVDVRINDLVGNGISGILHKWVNYGKGWRPRWFVLQDGVLS 120
+ T+VA G+L+KW NYGKGWR RWF+L++GVLS
Sbjct: 50 --------------SETTVA--------------GVLYKWTNYGKGWRSRWFLLRNGVLS 81
Query: 121 YYKIHGPDKI---------VVNPETEKGS--KVIGDESMRII------------------ 151
Y KI P+ + P + GS K++ ++ I
Sbjct: 82 YAKIRCPENLNLLIPSDDWTAPPLSHDGSTAKLLLLPALSISRLKDSFFGSGHENYPPEP 141
Query: 152 ---SRNRKSHRSLQRKPFGEIHLKVSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAW 208
S K H L+R + +S+ RESKSDD+RF IFT TK HLR ++R+DRVAW
Sbjct: 142 DSSSGTEKEHFLLER---AVVWKPISSFRESKSDDRRFYIFTATKTFHLRTDSRKDRVAW 198
Query: 209 MEALQAVKDMFPR--MSNSELMAPVDNVGISTEKLRNRLQQEGLNEAAIQDSEQI 261
++AL + + ++P +++ L+AP +N+ +STE+L+ RL +EG E +++ EQI
Sbjct: 199 IQALVSTRGLYPLQPLNDHLLLAP-NNISLSTERLKIRLLEEGTGENLVKECEQI 252
>Glyma11g03420.1
Length = 703
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 143/295 (48%), Gaps = 82/295 (27%)
Query: 1 MHPLCCVSAITDNSSPVKPSPSAGPLAGLSMPPFPSAVRSESFPRPAGHGHVSHSVTNGG 60
MHPLCC+S ++ K SP P A R+ S P HG+ +
Sbjct: 6 MHPLCCISL--ESPGIGKHSPEREPAA---------LFRTSSLPAAGSHGNAAQG----- 49
Query: 61 DCSRASXXXXXLPSTSTSVAVDVRINDLVGNGISGILHKWVNYGKGWRPRWFVLQDGVLS 120
+ T+VA G+L+KW NYGKGWR RWF+L++GVLS
Sbjct: 50 --------------SETTVA--------------GVLYKWTNYGKGWRSRWFLLRNGVLS 81
Query: 121 YYKIHGPDKI---------VVNPETEKGS--KVIGDESMRII------------------ 151
Y KI P+ + P + GS K++ ++ I
Sbjct: 82 YAKIRCPENLNLLIPSDDWTAPPLSHDGSTAKLLLLPALSISRLKDSFFGSGHENYPPEP 141
Query: 152 ---SRNRKSHRSLQRKPFGEIHLKVSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAW 208
S K H L+R + +S+ RESKSDD+RF IFT TK HLR ++R+DRVAW
Sbjct: 142 DSSSGTEKEHFLLER---AVVWKPISSFRESKSDDRRFYIFTATKTFHLRTDSRKDRVAW 198
Query: 209 MEALQAVKDMFPR--MSNSELMAPVDNVGISTEKLRNRLQQEGLNEAAIQDSEQI 261
++AL + + ++P +++ L+AP +N+ +STE+L+ RL +EG E +++ EQI
Sbjct: 199 IQALVSTRGLYPLQPLNDHLLLAP-NNISLSTERLKIRLLEEGTGENLVKECEQI 252
>Glyma05g04340.1
Length = 693
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 135/264 (51%), Gaps = 65/264 (24%)
Query: 1 MHPLCCVSAITDNSSPVKPSPSAGPLAGLSMPPFPSAVRSESFPRPAGHGHVSHSVTNGG 60
MHPLCC+S + P P A L+ R+ S P AG + G
Sbjct: 6 MHPLCCISLESPGIGSDSPEPEAAALS-----------RTRSLP--AG--------GSDG 44
Query: 61 DCSRASXXXXXLPSTSTSVAVDVRINDLVGNGISGILHKWVNYGKGWRPRWFVLQDGVLS 120
R S ++G+L+KW NYGKGWR RWF+L++GVLS
Sbjct: 45 IARRGSEAT-----------------------VAGVLYKWTNYGKGWRSRWFLLRNGVLS 81
Query: 121 YYKIHGPDKI-VVNPETEKGSKVIGDESMRIISRNRKSHRSLQRKPFGEIHLKVSTIRES 179
Y KI P+ + +++P + ++IG+ ++ NR + ES
Sbjct: 82 YAKIRWPENLNLLSPVDD--VRLIGE-----VTANR----------LAREAASAAATVES 124
Query: 180 KSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPR--MSNSELMAPVDNVGIS 237
KSDD+RF IFT TK LHLR ++R+DRVAW++AL + + ++P +S+ +AP +N+ +S
Sbjct: 125 KSDDRRFYIFTSTKTLHLRTDSRKDRVAWIQALVSTRGLYPLRPLSDHLSLAP-NNISVS 183
Query: 238 TEKLRNRLQQEGLNEAAIQDSEQI 261
E+L+ RL + G +E+ ++D EQI
Sbjct: 184 AERLKKRLLEVGSSESLVKDCEQI 207