Miyakogusa Predicted Gene

Lj0g3v0235439.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0235439.1 Non Chatacterized Hit- tr|E0CRX4|E0CRX4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.1,6e-19,seg,NULL,CUFF.15408.1
         (237 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g37890.1                                                       101   8e-22
Glyma14g36110.1                                                        66   4e-11

>Glyma02g37890.1 
          Length = 343

 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 79/181 (43%), Gaps = 9/181 (4%)

Query: 1   MTPSPSQVFPAPYRNPVWNGPRGPAPYNFPFHPSGGGTYPNPRFE-------XXXXXXXX 53
           MTP P Q  PA YRNPVW+GP GPA YNFP HPS GGTYP+PRFE               
Sbjct: 110 MTPHPIQASPAAYRNPVWSGPGGPAHYNFPLHPSSGGTYPSPRFEPSGGPLYNTAQGIAH 169

Query: 54  XXXXXXXXXXXGYTNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRGRGS--W 111
                      GY N+                                   G+GRG   W
Sbjct: 170 QPSYSPNPPYPGYVNSPRPSYSPNPSPGYSNCPMPSYSPNPSPGYRNSPSPGQGRGRGFW 229

Query: 112 QNTXXXXXXXXXXXXXXXXXHWSNEDQSIAPERYYKRSMIEDPWKFLQPVIWKAVGISFN 171
           +NT                 H SNE+    P+R+YKRSM+EDPW+ L+P+IWKA     N
Sbjct: 230 RNTGSPVSGWGSGQGPNFHGHRSNENTVHGPDRFYKRSMVEDPWEHLEPIIWKANDGYLN 289

Query: 172 T 172
           T
Sbjct: 290 T 290


>Glyma14g36110.1 
          Length = 360

 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/44 (70%), Positives = 34/44 (77%)

Query: 2   TPSPSQVFPAPYRNPVWNGPRGPAPYNFPFHPSGGGTYPNPRFE 45
           TP P Q  PA YR P+W+GP GPA YNFP HPS GGTYP+PRFE
Sbjct: 112 TPHPIQASPAAYRKPIWSGPGGPAHYNFPIHPSSGGTYPSPRFE 155



 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 40/69 (57%)

Query: 104 RGRGRGSWQNTXXXXXXXXXXXXXXXXXHWSNEDQSIAPERYYKRSMIEDPWKFLQPVIW 163
           +GRGRG W+NT                 H SNE+ +  P+R+Y RSM+EDPW+ L+P+IW
Sbjct: 239 QGRGRGFWRNTGSPVSGRGSGQGPNFHGHRSNENTARGPDRFYNRSMVEDPWEHLEPIIW 298

Query: 164 KAVGISFNT 172
           KA     NT
Sbjct: 299 KANDGYLNT 307